RNA–Protein interactions for RNA: ENST00000591955.1

NPC1-213, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 4

Gene NPC1, Length 561 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-213ENST00000591955 SORL1Q92673 2214 aa3.76□□□□□ -1.81
NPC1-213ENST00000591955 IGLV1-50A0A075B6I6 118 aa3.75□□□□□ -1.81
NPC1-213ENST00000591955 RPL37AP61513 92 aaKnown RBP3.75□□□□□ -1.81
NPC1-213ENST00000591955 Q6ZR54 194 aa3.75□□□□□ -1.81
NPC1-213ENST00000591955 WFDC13Q8IUB5 93 aa3.75□□□□□ -1.81
NPC1-213ENST00000591955 KRTAP4-4Q9BYR3 166 aa3.75□□□□□ -1.81
NPC1-213ENST00000591955 LINC00313P59037 77 aa3.74□□□□□ -1.81
NPC1-213ENST00000591955 C18orf65Q6ZTR6 163 aa3.74□□□□□ -1.81
NPC1-213ENST00000591955 WFDC10BQ8IUB3 73 aa3.74□□□□□ -1.81
NPC1-213ENST00000591955 H0Y9J4 135 aa3.72□□□□□ -1.81
NPC1-213ENST00000591955 SPRR1BP22528 89 aa3.72□□□□□ -1.81
NPC1-213ENST00000591955 IGFL1Q6UW32 110 aa3.72□□□□□ -1.81
NPC1-213ENST00000591955 RYR2Q92736 4967 aa3.71□□□□□ -1.82
NPC1-213ENST00000591955 A0A087WSZ3 146 aa3.71□□□□□ -1.82
NPC1-213ENST00000591955 ACYP2P14621 99 aa3.71□□□□□ -1.82
NPC1-213ENST00000591955 LINC01556Q5JQF7 62 aa3.71□□□□□ -1.82
NPC1-213ENST00000591955 SERTAD4-AS1Q5TG53 156 aa3.71□□□□□ -1.82
NPC1-213ENST00000591955 SPAG11AQ6PDA7 123 aa3.71□□□□□ -1.82
NPC1-213ENST00000591955 REG3GQ6UW15 175 aa3.71□□□□□ -1.82
NPC1-213ENST00000591955 C15orf56Q8N910 161 aa3.71□□□□□ -1.82
NPC1-213ENST00000591955 IGKV2D-30A0A075B6S6 120 aa3.7□□□□□ -1.82
NPC1-213ENST00000591955 A0A096LPF7 62 aa3.7□□□□□ -1.82
NPC1-213ENST00000591955 KRTAP26-1Q6PEX3 210 aa3.7□□□□□ -1.82
NPC1-213ENST00000591955 DYNC2H1Q8NCM8 4307 aaKnown RBP3.69□□□□□ -1.82
NPC1-213ENST00000591955 MMP24-AS1A0A0U1RRL7 71 aa3.69□□□□□ -1.82
NPC1-213ENST00000591955 A8MU10 97 aa3.69□□□□□ -1.82
NPC1-213ENST00000591955 KRTAP10-3P60369 221 aa3.69□□□□□ -1.82
NPC1-213ENST00000591955 SPATA8Q6RVD6 105 aa3.69□□□□□ -1.82
NPC1-213ENST00000591955 LINC00472Q9H8W2 130 aa3.69□□□□□ -1.82
NPC1-213ENST00000591955 IGKV2-24A0A0C4DH68 120 aa3.68□□□□□ -1.82
NPC1-213ENST00000591955 UQCR11O14957 56 aa3.68□□□□□ -1.82
NPC1-213ENST00000591955 RTL8CO15255 209 aa3.68□□□□□ -1.82
NPC1-213ENST00000591955 CDK2AP2O75956 126 aa3.67□□□□□ -1.82
NPC1-213ENST00000591955 HRES1P13985 223 aa3.67□□□□□ -1.82
NPC1-213ENST00000591955 SPINK7P58062 85 aa3.67□□□□□ -1.82
NPC1-213ENST00000591955 HYDINQ4G0P3 5121 aa3.67□□□□□ -1.82
NPC1-213ENST00000591955 A0A1B0GU69 56 aa3.66□□□□□ -1.82
NPC1-213ENST00000591955 DNAH3Q8TD57 4116 aa3.66□□□□□ -1.82
NPC1-213ENST00000591955 NOTCH3Q9UM47 2321 aa3.65□□□□□ -1.82
NPC1-213ENST00000591955 NOTCH2NLQ7Z3S9 236 aa3.65□□□□□ -1.83
NPC1-213ENST00000591955 PRR26Q8N8Z3 221 aa3.65□□□□□ -1.83
NPC1-213ENST00000591955 DNAH10OSP0CZ25 163 aa3.64□□□□□ -1.83
NPC1-213ENST00000591955 MIR22HGQ0VDD5 57 aa3.64□□□□□ -1.83
NPC1-213ENST00000591955 MRPL34Q9BQ48 92 aaKnown RBP3.64□□□□□ -1.83
NPC1-213ENST00000591955 C8orf17Q9NRJ1 99 aa3.64□□□□□ -1.83
NPC1-213ENST00000591955 DEFB135Q30KP9 77 aa3.63□□□□□ -1.83
NPC1-213ENST00000591955 PCOTHQ58A44 107 aa3.63□□□□□ -1.83
NPC1-213ENST00000591955 DMAC1Q96GE9 116 aa3.63□□□□□ -1.83
NPC1-213ENST00000591955 TENM3Q9P273 2699 aa3.63□□□□□ -1.83
NPC1-213ENST00000591955 TENM2Q9NT68 2774 aa3.63□□□□□ -1.83
NPC1-213ENST00000591955 A0A1B0GVX0 72 aa3.62□□□□□ -1.83
NPC1-213ENST00000591955 C14orf177Q52M58 125 aa3.62□□□□□ -1.83
NPC1-213ENST00000591955 ZNF706Q9Y5V0 76 aaPredicted RBP3.62□□□□□ -1.83
NPC1-213ENST00000591955 DNAH9Q9NYC9 4486 aa3.61□□□□□ -1.83
NPC1-213ENST00000591955 HTN3P15516 51 aa3.61□□□□□ -1.83
NPC1-213ENST00000591955 KRTAP10-5P60370 271 aa3.61□□□□□ -1.83
NPC1-213ENST00000591955 DEFB116Q30KQ4 102 aa3.61□□□□□ -1.83
NPC1-213ENST00000591955 COL7A1Q02388 2944 aa3.61□□□□□ -1.83
NPC1-213ENST00000591955 SACSQ9NZJ4 4579 aa3.61□□□□□ -1.83
NPC1-213ENST00000591955 DNAH1Q9P2D7 4330 aa3.61□□□□□ -1.83
NPC1-213ENST00000591955 IGHV6-1A0A0B4J1U7 121 aa3.6□□□□□ -1.83
NPC1-213ENST00000591955 K7EIL1 84 aa3.59□□□□□ -1.83
NPC1-213ENST00000591955 MT3P25713 68 aa3.59□□□□□ -1.83
NPC1-213ENST00000591955 PCLOQ9Y6V0 5065 aa3.59□□□□□ -1.84
NPC1-213ENST00000591955 HERC2O95714 4834 aa3.58□□□□□ -1.84
NPC1-213ENST00000591955 PRAC1Q96KF2 57 aa3.58□□□□□ -1.84
NPC1-213ENST00000591955 LYSTQ99698 3801 aa3.58□□□□□ -1.84
NPC1-213ENST00000591955 DNAH7Q8WXX0 4024 aa3.55□□□□□ -1.84
NPC1-213ENST00000591955 KRTAP9-6A8MVA2 160 aa3.54□□□□□ -1.84
NPC1-213ENST00000591955 PRLHP81277 87 aa3.54□□□□□ -1.84
NPC1-213ENST00000591955 LINC00483Q53H64 154 aa3.54□□□□□ -1.84
NPC1-213ENST00000591955 CSAG1Q6PB30 78 aa3.54□□□□□ -1.84
NPC1-213ENST00000591955 Q96NJ1 140 aa3.54□□□□□ -1.84
NPC1-213ENST00000591955 STARD9Q9P2P6 4700 aa3.54□□□□□ -1.84
NPC1-213ENST00000591955 FAM168BA1KXE4 195 aa3.53□□□□□ -1.84
NPC1-213ENST00000591955 K7ERS5 55 aa3.53□□□□□ -1.84
NPC1-213ENST00000591955 DEFB4AO15263 64 aa3.53□□□□□ -1.84
NPC1-213ENST00000591955 IGLV7-43P04211 117 aa3.53□□□□□ -1.84
NPC1-213ENST00000591955 ROMO1P60602 79 aa3.53□□□□□ -1.84
NPC1-213ENST00000591955 CASC10Q5T4H9 136 aa3.53□□□□□ -1.84
NPC1-213ENST00000591955 KRTAP7-1Q8IUC3 87 aa3.53□□□□□ -1.84
NPC1-213ENST00000591955 CSMD3Q7Z407 3707 aa3.53□□□□□ -1.84
NPC1-213ENST00000591955 STAB2Q8WWQ8 2551 aa3.53□□□□□ -1.85
NPC1-213ENST00000591955 ZNF861PO60384 105 aa3.52□□□□□ -1.85
NPC1-213ENST00000591955 KRTAP13-3Q3SY46 172 aa3.52□□□□□ -1.85
NPC1-213ENST00000591955 C1orf134Q5TEV5 83 aa3.52□□□□□ -1.85
NPC1-213ENST00000591955 LY6G6CO95867 125 aa3.51□□□□□ -1.85
NPC1-213ENST00000591955 KRTAP25-1Q3LHN0 102 aa3.51□□□□□ -1.85
NPC1-213ENST00000591955 HUWE1Q7Z6Z7 4374 aaKnown RBP3.51□□□□□ -1.85
NPC1-213ENST00000591955 ALMS1Q8TCU4 4167 aa3.51□□□□□ -1.85
NPC1-213ENST00000591955 ADM2Q7Z4H4 148 aa3.5□□□□□ -1.85
NPC1-213ENST00000591955 ANAPC11Q9NYG5 84 aa3.5□□□□□ -1.85
NPC1-213ENST00000591955 FRAS1Q86XX4 4008 aa3.5□□□□□ -1.85
NPC1-213ENST00000591955 RYR1P21817 5038 aa3.49□□□□□ -1.85
NPC1-213ENST00000591955 KRTAP13-1Q8IUC0 172 aa3.49□□□□□ -1.85
NPC1-213ENST00000591955 A0A096LNI7 61 aa3.48□□□□□ -1.85
NPC1-213ENST00000591955 HECTD4Q9Y4D8 3996 aa3.47□□□□□ -1.85
NPC1-213ENST00000591955 A0A0G2JQZ4 141 aa3.46□□□□□ -1.86
NPC1-213ENST00000591955 A0A1W2PNN7 141 aa3.46□□□□□ -1.86
NPC1-213ENST00000591955 A8MUU9 505 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 208 ms