RNA–Protein interactions for RNA: ENST00000591782.1

VMP1-212, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 729 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-212ENST00000591782 CSMD2Q7Z408 3487 aa1.87□□□□□ -2.11
VMP1-212ENST00000591782 M0R2N4 97 aa1.87□□□□□ -2.11
VMP1-212ENST00000591782 RYR1P21817 5038 aa1.87□□□□□ -2.11
VMP1-212ENST00000591782 DEFB131AP59861 70 aa1.87□□□□□ -2.11
VMP1-212ENST00000591782 RYR3Q15413 4870 aa1.87□□□□□ -2.11
VMP1-212ENST00000591782 KRTAP5-2Q701N4 177 aa1.87□□□□□ -2.11
VMP1-212ENST00000591782 Q96NJ1 140 aa1.87□□□□□ -2.11
VMP1-212ENST00000591782 F8P00451 2351 aa1.87□□□□□ -2.11
VMP1-212ENST00000591782 UBR4Q5T4S7 5183 aa1.87□□□□□ -2.11
VMP1-212ENST00000591782 CELSR2Q9HCU4 2923 aa1.86□□□□□ -2.11
VMP1-212ENST00000591782 A0A096LNT2 108 aa1.86□□□□□ -2.11
VMP1-212ENST00000591782 IGLV6-57P01721 117 aa1.86□□□□□ -2.11
VMP1-212ENST00000591782 PCOTHQ58A44 107 aa1.86□□□□□ -2.11
VMP1-212ENST00000591782 CRIPTQ9P021 101 aa1.86□□□□□ -2.11
VMP1-212ENST00000591782 COL6A5A8TX70 2615 aa1.85□□□□□ -2.11
VMP1-212ENST00000591782 FLNAP21333 2647 aaKnown RBP1.85□□□□□ -2.11
VMP1-212ENST00000591782 IGKV2-24A0A0C4DH68 120 aa1.85□□□□□ -2.11
VMP1-212ENST00000591782 ICE1Q9Y2F5 2266 aa1.85□□□□□ -2.11
VMP1-212ENST00000591782 KMT2CQ8NEZ4 4911 aaKnown RBP1.85□□□□□ -2.11
VMP1-212ENST00000591782 COX6B2Q6YFQ2 88 aa1.84□□□□□ -2.11
VMP1-212ENST00000591782 USMG5Q96IX5 58 aa1.84□□□□□ -2.11
VMP1-212ENST00000591782 ASCC3Q8N3C0 2202 aaKnown RBP1.84□□□□□ -2.11
VMP1-212ENST00000591782 HIVEP1P15822 2718 aa1.84□□□□□ -2.12
VMP1-212ENST00000591782 COL6A6A6NMZ7 2263 aa1.84□□□□□ -2.12
VMP1-212ENST00000591782 ANKHD1Q8IWZ3 2542 aaKnown RBP1.84□□□□□ -2.12
VMP1-212ENST00000591782 UTP20O75691 2785 aaKnown RBP1.84□□□□□ -2.12
VMP1-212ENST00000591782 CUBNO60494 3623 aa1.83□□□□□ -2.12
VMP1-212ENST00000591782 USP9YO00507 2555 aaPredicted RBP1.83□□□□□ -2.12
VMP1-212ENST00000591782 COX6A2Q02221 97 aa1.83□□□□□ -2.12
VMP1-212ENST00000591782 LINC00304Q8N9R0 145 aa1.83□□□□□ -2.12
VMP1-212ENST00000591782 HIVEP3Q5T1R4 2406 aa1.82□□□□□ -2.12
VMP1-212ENST00000591782 AHCTF1Q8WYP5 2266 aa1.82□□□□□ -2.12
VMP1-212ENST00000591782 KRTAP13-2Q52LG2 175 aa1.82□□□□□ -2.12
VMP1-212ENST00000591782 PRR9Q5T870 116 aa1.82□□□□□ -2.12
VMP1-212ENST00000591782 Q6ZRX8 168 aa1.82□□□□□ -2.12
VMP1-212ENST00000591782 DEFB124Q8NES8 71 aa1.82□□□□□ -2.12
VMP1-212ENST00000591782 MRPL34Q9BQ48 92 aaKnown RBP1.82□□□□□ -2.12
VMP1-212ENST00000591782 R4GN34 69 aa1.82□□□□□ -2.12
VMP1-212ENST00000591782 HYDINQ4G0P3 5121 aa1.82□□□□□ -2.12
VMP1-212ENST00000591782 EPPK1P58107 5090 aaKnown RBP1.81□□□□□ -2.12
VMP1-212ENST00000591782 INE1O15225 51 aa1.81□□□□□ -2.12
VMP1-212ENST00000591782 KAAG1Q9UBP8 84 aa1.81□□□□□ -2.12
VMP1-212ENST00000591782 PLAC4Q8WY50 150 aa1.8□□□□□ -2.12
VMP1-212ENST00000591782 ACACAQ13085 2346 aa1.8□□□□□ -2.12
VMP1-212ENST00000591782 APCP25054 2843 aa1.8□□□□□ -2.12
VMP1-212ENST00000591782 GVQW2A0A096LPI5 108 aaPredicted RBP1.79□□□□□ -2.12
VMP1-212ENST00000591782 H3BUA1 57 aa1.79□□□□□ -2.12
VMP1-212ENST00000591782 KLK9Q2XQG4 91 aa1.79□□□□□ -2.12
VMP1-212ENST00000591782 UBE2DNLQ8IWF7 75 aa1.79□□□□□ -2.12
VMP1-212ENST00000591782 CACNA1EQ15878 2313 aa1.79□□□□□ -2.12
VMP1-212ENST00000591782 NBASA2RRP1 2371 aa1.79□□□□□ -2.12
VMP1-212ENST00000591782 DCHS2Q6V1P9 2916 aa1.79□□□□□ -2.12
VMP1-212ENST00000591782 BSNQ9UPA5 3926 aa1.78□□□□□ -2.12
VMP1-212ENST00000591782 APELAP0DMC3 54 aa1.78□□□□□ -2.12
VMP1-212ENST00000591782 SPINK13Q1W4C9 94 aa1.78□□□□□ -2.12
VMP1-212ENST00000591782 DEFB110Q30KQ9 67 aa1.78□□□□□ -2.12
VMP1-212ENST00000591782 DEFB109BQ30KR1 87 aa1.78□□□□□ -2.12
VMP1-212ENST00000591782 DEFB104AQ8WTQ1 72 aa1.78□□□□□ -2.12
VMP1-212ENST00000591782 CENPEQ02224 2701 aa1.78□□□□□ -2.12
VMP1-212ENST00000591782 VWFP04275 2813 aa1.77□□□□□ -2.13
VMP1-212ENST00000591782 TGP01266 2768 aa1.77□□□□□ -2.13
VMP1-212ENST00000591782 APC2O95996 2303 aa1.77□□□□□ -2.13
VMP1-212ENST00000591782 CSPG4Q6UVK1 2322 aa1.77□□□□□ -2.13
VMP1-212ENST00000591782 ANK2Q01484 3957 aa1.77□□□□□ -2.13
VMP1-212ENST00000591782 MMP24-AS1A0A0U1RRL7 71 aa1.77□□□□□ -2.13
VMP1-212ENST00000591782 G3V318 75 aa1.77□□□□□ -2.13
VMP1-212ENST00000591782 DEFB103AP81534 67 aa1.77□□□□□ -2.13
VMP1-212ENST00000591782 C10orf99Q6UWK7 81 aa1.77□□□□□ -2.13
VMP1-212ENST00000591782 PRRC2CQ9Y520 2896 aaKnown RBP1.77□□□□□ -2.13
VMP1-212ENST00000591782 TLN2Q9Y4G6 2542 aa1.76□□□□□ -2.13
VMP1-212ENST00000591782 DEFB105AQ8NG35 78 aa1.76□□□□□ -2.13
VMP1-212ENST00000591782 SPTBN1Q01082 2364 aaKnown RBP1.76□□□□□ -2.13
VMP1-212ENST00000591782 PLCE1Q9P212 2302 aa1.75□□□□□ -2.13
VMP1-212ENST00000591782 MEGF8Q7Z7M0 2845 aa1.75□□□□□ -2.13
VMP1-212ENST00000591782 SPACA4Q8TDM5 124 aa1.75□□□□□ -2.13
VMP1-212ENST00000591782 VPS13CQ709C8 3753 aa1.75□□□□□ -2.13
VMP1-212ENST00000591782 TENM1Q9UKZ4 2725 aa1.74□□□□□ -2.13
VMP1-212ENST00000591782 RPL37P61927 97 aaKnown RBP1.74□□□□□ -2.13
VMP1-212ENST00000591782 TPRXLQ17RH7 258 aa1.74□□□□□ -2.13
VMP1-212ENST00000591782 KIAA1109Q2LD37 5005 aa1.74□□□□□ -2.13
VMP1-212ENST00000591782 A8MTW9 85 aa1.73□□□□□ -2.13
VMP1-212ENST00000591782 H1FX-AS1Q4G0G2 97 aa1.73□□□□□ -2.13
VMP1-212ENST00000591782 HERC2O95714 4834 aa1.73□□□□□ -2.13
VMP1-212ENST00000591782 ABCA1O95477 2261 aa1.73□□□□□ -2.13
VMP1-212ENST00000591782 H0YAA0 97 aa1.72□□□□□ -2.13
VMP1-212ENST00000591782 H3BUX3 64 aa1.72□□□□□ -2.13
VMP1-212ENST00000591782 RHPN1-AS1Q9BWJ2 59 aa1.72□□□□□ -2.13
VMP1-212ENST00000591782 Q9Y3F1 56 aa1.72□□□□□ -2.13
VMP1-212ENST00000591782 RYR2Q92736 4967 aa1.71□□□□□ -2.13
VMP1-212ENST00000591782 ZNF469Q96JG9 3925 aaPredicted RBP1.71□□□□□ -2.14
VMP1-212ENST00000591782 DEFB108BQ8NET1 73 aa1.71□□□□□ -2.14
VMP1-212ENST00000591782 WNK2Q9Y3S1 2297 aa1.7□□□□□ -2.14
VMP1-212ENST00000591782 HTN1P15515 57 aa1.7□□□□□ -2.14
VMP1-212ENST00000591782 CLPSL2Q6UWE3 100 aa1.7□□□□□ -2.14
VMP1-212ENST00000591782 Q6ZRN7 208 aaPredicted RBP1.7□□□□□ -2.14
VMP1-212ENST00000591782 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.69□□□□□ -2.144e-18■■■■■ 97.3
VMP1-212ENST00000591782 CD52P31358 61 aa1.69□□□□□ -2.14
VMP1-212ENST00000591782 PRLHP81277 87 aa1.69□□□□□ -2.14
VMP1-212ENST00000591782 NOP10Q9NPE3 64 aaKnown RBP1.69□□□□□ -2.14
VMP1-212ENST00000591782 ZANQ9Y493 2812 aa1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms