RNA–Protein interactions for RNA: ENST00000591584.1

VPS25-206, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-206ENST00000591584 PLA2G1BP04054 148 aaKnown RBP6.08□□□□□ -1.44
VPS25-206ENST00000591584 CYSTM1Q9H1C7 97 aa6.08□□□□□ -1.44
VPS25-206ENST00000591584 SNURFQ9Y675 71 aa6.08□□□□□ -1.44
VPS25-206ENST00000591584 C8orf87E5RJ46 101 aa6.07□□□□□ -1.44
VPS25-206ENST00000591584 KRTAP13-2Q52LG2 175 aa6.07□□□□□ -1.44
VPS25-206ENST00000591584 SPAG11AQ6PDA7 123 aa6.07□□□□□ -1.44
VPS25-206ENST00000591584 A0A087X002 238 aa6.06□□□□□ -1.44
VPS25-206ENST00000591584 FAM236DA0A1B0GTK5 79 aa6.06□□□□□ -1.44
VPS25-206ENST00000591584 FAM236CP0DP71 79 aa6.06□□□□□ -1.44
VPS25-206ENST00000591584 RPS29P62273 56 aaKnown RBP6.06□□□□□ -1.44
VPS25-206ENST00000591584 DYNC1H1Q14204 4646 aaKnown RBP6.05□□□□□ -1.44
VPS25-206ENST00000591584 SPINK1P00995 79 aa6.05□□□□□ -1.44
VPS25-206ENST00000591584 TYMSOSQ8TAI1 123 aa6.05□□□□□ -1.44
VPS25-206ENST00000591584 IGHV6-1A0A0B4J1U7 121 aa6.04□□□□□ -1.44
VPS25-206ENST00000591584 ZCCHC13Q8WW36 166 aaKnown RBP6.04□□□□□ -1.44
VPS25-206ENST00000591584 MRPL34Q9BQ48 92 aaKnown RBP6.04□□□□□ -1.44
VPS25-206ENST00000591584 RYR2Q92736 4967 aa6.01□□□□□ -1.45
VPS25-206ENST00000591584 H0Y9P7 68 aa6□□□□□ -1.45
VPS25-206ENST00000591584 LCE2CQ5TA81 110 aa6□□□□□ -1.45
VPS25-206ENST00000591584 C1orf195Q5TG92 126 aa6□□□□□ -1.45
VPS25-206ENST00000591584 SERP1Q9Y6X1 66 aa6□□□□□ -1.45
VPS25-206ENST00000591584 TRAV22A0A0B4J277 110 aa5.99□□□□□ -1.45
VPS25-206ENST00000591584 SRRM2Q9UQ35 2752 aaKnown RBP5.99□□□□□ -1.45
VPS25-206ENST00000591584 SMR3BP02814 79 aaPredicted RBP5.98□□□□□ -1.45
VPS25-206ENST00000591584 LINC00313P59037 77 aa5.98□□□□□ -1.45
VPS25-206ENST00000591584 LINC00208Q96KT6 92 aa5.98□□□□□ -1.45
VPS25-206ENST00000591584 LINC00304Q8N9R0 145 aa5.97□□□□□ -1.45
VPS25-206ENST00000591584 NDUFS5O43920 106 aa5.96□□□□□ -1.46
VPS25-206ENST00000591584 KRTAP10-4P60372 401 aaPredicted RBP5.96□□□□□ -1.46
VPS25-206ENST00000591584 C1orf64Q8NEQ6 169 aa5.96□□□□□ -1.46
VPS25-206ENST00000591584 APOBP04114 4563 aaKnown RBP5.95□□□□□ -1.46
VPS25-206ENST00000591584 VPS13BQ7Z7G8 4022 aa5.95□□□□□ -1.46
VPS25-206ENST00000591584 LCE2AQ5TA79 106 aaPredicted RBP5.95□□□□□ -1.46
VPS25-206ENST00000591584 SPANXA2-OT1Q8N9U9 137 aa5.95□□□□□ -1.46
VPS25-206ENST00000591584 PRR26Q8N8Z3 221 aa5.94□□□□□ -1.46
VPS25-206ENST00000591584 CYP4F30PQ9H0H9 118 aa5.93□□□□□ -1.46
VPS25-206ENST00000591584 NOTCH2NLQ7Z3S9 236 aa5.92□□□□□ -1.46
VPS25-206ENST00000591584 Q8N9P0 234 aaPredicted RBP5.92□□□□□ -1.46
VPS25-206ENST00000591584 LOC101927531A0A1B0GV80 90 aa5.91□□□□□ -1.46
VPS25-206ENST00000591584 SMIM26A0A096LP01 95 aa5.88□□□□□ -1.47
VPS25-206ENST00000591584 IGLV7-46A0A075B6I9 117 aa5.87□□□□□ -1.47
VPS25-206ENST00000591584 PKHD1P08F94 4074 aa5.87□□□□□ -1.47
VPS25-206ENST00000591584 FAT1Q14517 4588 aa5.87□□□□□ -1.47
VPS25-206ENST00000591584 KMT2CQ8NEZ4 4911 aaKnown RBP5.86□□□□□ -1.47
VPS25-206ENST00000591584 KRTAP16-1A8MUX0 517 aa5.85□□□□□ -1.47
VPS25-206ENST00000591584 KRTAP13-3Q3SY46 172 aa5.84□□□□□ -1.47
VPS25-206ENST00000591584 OXTP01178 125 aa5.83□□□□□ -1.48
VPS25-206ENST00000591584 Q5VSD8 79 aa5.83□□□□□ -1.48
VPS25-206ENST00000591584 Q5W150 140 aa5.82□□□□□ -1.48
VPS25-206ENST00000591584 PKHD1L1Q86WI1 4243 aa5.81□□□□□ -1.48
VPS25-206ENST00000591584 LORP23490 312 aaPredicted RBP5.8□□□□□ -1.48
VPS25-206ENST00000591584 KRTAP10-8P60410 259 aa5.8□□□□□ -1.48
VPS25-206ENST00000591584 IGKV2-30P06310 120 aa5.78□□□□□ -1.48
VPS25-206ENST00000591584 PCOTHQ58A44 107 aa5.78□□□□□ -1.48
VPS25-206ENST00000591584 PRR4Q16378 134 aa5.76□□□□□ -1.49
VPS25-206ENST00000591584 FP248Q71RG6 208 aaPredicted RBP5.76□□□□□ -1.49
VPS25-206ENST00000591584 Q8N1X5 172 aa5.76□□□□□ -1.49
VPS25-206ENST00000591584 V9GYY9 64 aa5.76□□□□□ -1.49
VPS25-206ENST00000591584 RYR1P21817 5038 aa5.75□□□□□ -1.49
VPS25-206ENST00000591584 C20orf166-AS1Q96NR2 134 aa5.75□□□□□ -1.49
VPS25-206ENST00000591584 A8MUU9 505 aa5.74□□□□□ -1.49
VPS25-206ENST00000591584 RYR3Q15413 4870 aa5.74□□□□□ -1.49
VPS25-206ENST00000591584 HSPG2P98160 4391 aa5.72□□□□□ -1.49
VPS25-206ENST00000591584 ACYP2P14621 99 aa5.72□□□□□ -1.49
VPS25-206ENST00000591584 Q1T7F1 81 aa5.72□□□□□ -1.49
VPS25-206ENST00000591584 HRES1P13985 223 aa5.7□□□□□ -1.5
VPS25-206ENST00000591584 COA5Q86WW8 74 aa5.7□□□□□ -1.5
VPS25-206ENST00000591584 C7orf65Q6ZTY9 151 aa5.69□□□□□ -1.5
VPS25-206ENST00000591584 Q75L30 129 aa5.69□□□□□ -1.5
VPS25-206ENST00000591584 RETNLBQ9BQ08 111 aa5.69□□□□□ -1.5
VPS25-206ENST00000591584 DMAC1Q96GE9 116 aa5.68□□□□□ -1.5
VPS25-206ENST00000591584 IGKV2D-30A0A075B6S6 120 aa5.67□□□□□ -1.5
VPS25-206ENST00000591584 C9orf92A6NGG3 77 aa5.67□□□□□ -1.5
VPS25-206ENST00000591584 C4orf26Q17RF5 130 aa5.67□□□□□ -1.5
VPS25-206ENST00000591584 FAT3Q8TDW7 4589 aa5.66□□□□□ -1.5
VPS25-206ENST00000591584 MPLKIPQ8TAP9 179 aa5.65□□□□□ -1.5
VPS25-206ENST00000591584 A0A0A0MQY5 61 aa5.64□□□□□ -1.51
VPS25-206ENST00000591584 A8MUN3 132 aa5.64□□□□□ -1.51
VPS25-206ENST00000591584 TNXBP22105 4242 aa5.64□□□□□ -1.51
VPS25-206ENST00000591584 PRO0628Q9UI54 55 aa5.63□□□□□ -1.51
VPS25-206ENST00000591584 CHKB-CPT1BH3BT56 60 aa5.61□□□□□ -1.51
VPS25-206ENST00000591584 FLG2Q5D862 2391 aaPredicted RBP5.61□□□□□ -1.51
VPS25-206ENST00000591584 MT1HL1P0DM35 61 aa5.6□□□□□ -1.51
VPS25-206ENST00000591584 ATP11AUNQ6ZP68 121 aa5.6□□□□□ -1.51
VPS25-206ENST00000591584 LINC01558Q9Y6Z2 57 aa5.58□□□□□ -1.52
VPS25-206ENST00000591584 KIAA1109Q2LD37 5005 aa5.58□□□□□ -1.52
VPS25-206ENST00000591584 RPL37P61927 97 aaKnown RBP5.57□□□□□ -1.52
VPS25-206ENST00000591584 KRTAP17-1Q9BYP8 105 aa5.57□□□□□ -1.52
VPS25-206ENST00000591584 LRP1Q07954 4544 aaKnown RBP5.56□□□□□ -1.52
VPS25-206ENST00000591584 SPINK7P58062 85 aa5.56□□□□□ -1.52
VPS25-206ENST00000591584 SPTSSBQ8NFR3 76 aa5.53□□□□□ -1.52
VPS25-206ENST00000591584 EPPK1P58107 5090 aaKnown RBP5.52□□□□□ -1.53
VPS25-206ENST00000591584 XP32Q5T750 250 aa5.52□□□□□ -1.53
VPS25-206ENST00000591584 PSPHP1O15172 72 aa5.51□□□□□ -1.53
VPS25-206ENST00000591584 TPRXLQ17RH7 258 aa5.51□□□□□ -1.53
VPS25-206ENST00000591584 PRR15LQ9BU68 103 aa5.51□□□□□ -1.53
VPS25-206ENST00000591584 Q5VV11 94 aa5.5□□□□□ -1.53
VPS25-206ENST00000591584 DMBT1Q9UGM3 2413 aaPredicted RBP5.48□□□□□ -1.53
VPS25-206ENST00000591584 KRTAP23-1A1A580 65 aa5.48□□□□□ -1.53
VPS25-206ENST00000591584 COX6B2Q6YFQ2 88 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 1250.9 ms