RNA–Protein interactions for RNA: ENST00000590874.5

CAPNS1-211, Transcript of calpain small subunit 1, humanhuman

TSL 5 BASIC

Gene CAPNS1, Length 926 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-211ENST00000590874 ETDBQ3ZM63 59 aa13.06□□□□□ -0.32
CAPNS1-211ENST00000590874 C20orf166-AS1Q96NR2 134 aa13.06□□□□□ -0.32
CAPNS1-211ENST00000590874 A8MUU9 505 aa13.01□□□□□ -0.33
CAPNS1-211ENST00000590874 JMJD7-PLA2G4BH0Y9G9 81 aa12.98□□□□□ -0.33
CAPNS1-211ENST00000590874 MT2AP02795 61 aa12.96□□□□□ -0.33
CAPNS1-211ENST00000590874 FCGBPQ9Y6R7 5405 aaPredicted RBP12.95□□□□□ -0.34
CAPNS1-211ENST00000590874 SS18L2Q9UHA2 77 aa12.94□□□□□ -0.34
CAPNS1-211ENST00000590874 NDUFV3P56181 108 aaKnown RBP12.93□□□□□ -0.34
CAPNS1-211ENST00000590874 J3QR89 54 aa12.91□□□□□ -0.34
CAPNS1-211ENST00000590874 LCE2BO14633 110 aa12.88□□□□□ -0.35
CAPNS1-211ENST00000590874 K7ERU9 68 aa12.87□□□□□ -0.35
CAPNS1-211ENST00000590874 MT1FP04733 61 aa12.87□□□□□ -0.35
CAPNS1-211ENST00000590874 DSCR10P59022 87 aa12.87□□□□□ -0.35
CAPNS1-211ENST00000590874 RBM3P98179 157 aaKnown RBP12.87□□□□□ -0.35
CAPNS1-211ENST00000590874 C21orf62-AS1Q17RA5 79 aa12.87□□□□□ -0.35
CAPNS1-211ENST00000590874 KRTAP19-1Q8IUB9 90 aa12.87□□□□□ -0.35
CAPNS1-211ENST00000590874 A0A087WSZ3 146 aa12.85□□□□□ -0.35
CAPNS1-211ENST00000590874 KRTAP16-1A8MUX0 517 aa12.84□□□□□ -0.35
CAPNS1-211ENST00000590874 PDE6GP18545 87 aa12.84□□□□□ -0.35
CAPNS1-211ENST00000590874 DSCR8Q96T75 97 aa12.83□□□□□ -0.36
CAPNS1-211ENST00000590874 C14orf132Q9NPU4 83 aa12.83□□□□□ -0.36
CAPNS1-211ENST00000590874 LOC110117498A0A087WWA1 95 aa12.82□□□□□ -0.36
CAPNS1-211ENST00000590874 FAM236DA0A1B0GTK5 79 aa12.81□□□□□ -0.36
CAPNS1-211ENST00000590874 FAM236CP0DP71 79 aa12.81□□□□□ -0.36
CAPNS1-211ENST00000590874 TRBV7-4A0A0J9YYF1 115 aa12.8□□□□□ -0.36
CAPNS1-211ENST00000590874 A0A1B0GV72 72 aa12.8□□□□□ -0.36
CAPNS1-211ENST00000590874 KRTAP9-3Q9BYQ3 159 aa12.8□□□□□ -0.36
CAPNS1-211ENST00000590874 FAM240AA0A1B0GVK7 77 aa12.76□□□□□ -0.37
CAPNS1-211ENST00000590874 Q6ZQT0 140 aa12.76□□□□□ -0.37
CAPNS1-211ENST00000590874 CCKP06307 115 aa12.75□□□□□ -0.37
CAPNS1-211ENST00000590874 SIGMAR1Q99720 223 aa12.75□□□□□ -0.37
CAPNS1-211ENST00000590874 KRTAP10-10P60014 251 aa12.74□□□□□ -0.37
CAPNS1-211ENST00000590874 MPLKIPQ8TAP9 179 aa12.74□□□□□ -0.37
CAPNS1-211ENST00000590874 ACYP1P07311 99 aa12.73□□□□□ -0.37
CAPNS1-211ENST00000590874 HRES1P13985 223 aa12.73□□□□□ -0.37
CAPNS1-211ENST00000590874 LINC00313P59037 77 aa12.69□□□□□ -0.38
CAPNS1-211ENST00000590874 RBM12B-AS1Q9P1G2 102 aa12.69□□□□□ -0.38
CAPNS1-211ENST00000590874 MACF1Q9UPN3 7388 aaKnown RBP12.68□□□□□ -0.38
CAPNS1-211ENST00000590874 A0A1W2PNM2 257 aa12.68□□□□□ -0.38
CAPNS1-211ENST00000590874 A0A1B0GW54 56 aa12.66□□□□□ -0.38
CAPNS1-211ENST00000590874 NOTCH2NLQ7Z3S9 236 aa12.66□□□□□ -0.38
CAPNS1-211ENST00000590874 IGKV4-1P06312 121 aa12.64□□□□□ -0.39
CAPNS1-211ENST00000590874 VPS25Q9BRG1 176 aa12.62□□□□□ -0.39
CAPNS1-211ENST00000590874 SYNE2Q8WXH0 6885 aaKnown RBP12.61□□□□□ -0.39
CAPNS1-211ENST00000590874 DEFB116Q30KQ4 102 aa12.55□□□□□ -0.4
CAPNS1-211ENST00000590874 LINC00846Q9NV44 126 aa12.55□□□□□ -0.4
CAPNS1-211ENST00000590874 UBL5Q9BZL1 73 aa12.52□□□□□ -0.41
CAPNS1-211ENST00000590874 IGHV6-1A0A0B4J1U7 121 aa12.5□□□□□ -0.41
CAPNS1-211ENST00000590874 LINC00472Q9H8W2 130 aa12.5□□□□□ -0.41
CAPNS1-211ENST00000590874 KRTAP19-6Q3LI70 58 aa12.48□□□□□ -0.41
CAPNS1-211ENST00000590874 LINC00643Q86TS7 51 aa12.47□□□□□ -0.41
CAPNS1-211ENST00000590874 Q6ZVQ6 151 aa12.45□□□□□ -0.42
CAPNS1-211ENST00000590874 NREPQ16612 68 aa12.42□□□□□ -0.42
CAPNS1-211ENST00000590874 ATP5EP2Q5VTU8 51 aa12.42□□□□□ -0.42
CAPNS1-211ENST00000590874 ZCCHC13Q8WW36 166 aaKnown RBP12.37□□□□□ -0.43
CAPNS1-211ENST00000590874 A0A1B0GVX0 72 aa12.36□□□□□ -0.43
CAPNS1-211ENST00000590874 C8orf87E5RJ46 101 aa12.36□□□□□ -0.43
CAPNS1-211ENST00000590874 SPINK7P58062 85 aa12.36□□□□□ -0.43
CAPNS1-211ENST00000590874 CXCL6P80162 114 aa12.33□□□□□ -0.44
CAPNS1-211ENST00000590874 MT-ATP8P03928 68 aa12.31□□□□□ -0.44
CAPNS1-211ENST00000590874 A8MWP4 228 aa12.29□□□□□ -0.44
CAPNS1-211ENST00000590874 BPY2O14599 106 aa12.29□□□□□ -0.44
CAPNS1-211ENST00000590874 IMUPQ9GZP8 106 aa12.28□□□□□ -0.44
CAPNS1-211ENST00000590874 IGKV3D-7A0A0C4DH55 119 aa12.27□□□□□ -0.45
CAPNS1-211ENST00000590874 J3KT08 172 aa12.26□□□□□ -0.45
CAPNS1-211ENST00000590874 Q8N9P0 234 aaPredicted RBP12.24□□□□□ -0.45
CAPNS1-211ENST00000590874 WFDC13Q8IUB5 93 aa12.23□□□□□ -0.45
CAPNS1-211ENST00000590874 KRTAP6-3Q3LI67 103 aa12.21□□□□□ -0.45
CAPNS1-211ENST00000590874 HIST1H4AP62805 103 aaKnown RBP12.15□□□□□ -0.46
CAPNS1-211ENST00000590874 NDUFB1O75438 58 aa12.11□□□□□ -0.47
CAPNS1-211ENST00000590874 K7EQZ3 153 aa12.09□□□□□ -0.47
CAPNS1-211ENST00000590874 SCGB1A1P11684 91 aa12.08□□□□□ -0.48
CAPNS1-211ENST00000590874 PRR15Q8IV56 129 aa12.07□□□□□ -0.48
CAPNS1-211ENST00000590874 Q8N9L7 120 aa12.07□□□□□ -0.48
CAPNS1-211ENST00000590874 C8orf17Q9NRJ1 99 aa12.07□□□□□ -0.48
CAPNS1-211ENST00000590874 A0A087WVE0 104 aa12.05□□□□□ -0.48
CAPNS1-211ENST00000590874 FAM236AA0A1B0GUQ0 79 aa11.99□□□□□ -0.49
CAPNS1-211ENST00000590874 FAM236BA0A1B0GV22 79 aa11.99□□□□□ -0.49
CAPNS1-211ENST00000590874 HCG22E2RYF7 251 aa11.97□□□□□ -0.49
CAPNS1-211ENST00000590874 H1FX-AS1Q4G0G2 97 aa11.97□□□□□ -0.49
CAPNS1-211ENST00000590874 MMP24-AS1A0A0U1RRL7 71 aa11.93□□□□□ -0.5
CAPNS1-211ENST00000590874 ATOX1O00244 68 aa11.91□□□□□ -0.5
CAPNS1-211ENST00000590874 NEBP20929 6669 aa11.91□□□□□ -0.5
CAPNS1-211ENST00000590874 CASC2Q6XLA1 102 aa11.89□□□□□ -0.51
CAPNS1-211ENST00000590874 hDV103S1A0JD37 113 aa11.86□□□□□ -0.51
CAPNS1-211ENST00000590874 TMEM254Q8TBM7 123 aa11.86□□□□□ -0.51
CAPNS1-211ENST00000590874 SMIM20Q8N5G0 67 aa11.84□□□□□ -0.51
CAPNS1-211ENST00000590874 MRPL34Q9BQ48 92 aaKnown RBP11.82□□□□□ -0.52
CAPNS1-211ENST00000590874 ANAPC13Q9BS18 74 aa11.77□□□□□ -0.53
CAPNS1-211ENST00000590874 MUC12Q9UKN1 5478 aa11.75□□□□□ -0.53
CAPNS1-211ENST00000590874 TRAV7A0A075B6U4 112 aa11.74□□□□□ -0.53
CAPNS1-211ENST00000590874 OCR1Q9BZK8 76 aa11.74□□□□□ -0.53
CAPNS1-211ENST00000590874 IGKV2D-30A0A075B6S6 120 aa11.72□□□□□ -0.53
CAPNS1-211ENST00000590874 NDUFS5O43920 106 aa11.72□□□□□ -0.53
CAPNS1-211ENST00000590874 IGKV2-30P06310 120 aa11.72□□□□□ -0.53
CAPNS1-211ENST00000590874 SERP2Q8N6R1 65 aa11.72□□□□□ -0.53
CAPNS1-211ENST00000590874 A6NN06 94 aa11.7□□□□□ -0.54
CAPNS1-211ENST00000590874 TP53AIP1Q9HCN2 124 aa11.7□□□□□ -0.54
CAPNS1-211ENST00000590874 MT1BP07438 61 aa11.67□□□□□ -0.54
CAPNS1-211ENST00000590874 Q5W150 140 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms