RNA–Protein interactions for RNA: ENST00000590301.1

NPC1-208, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 410 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-208ENST00000590301 Q96NJ1 140 aa3.97□□□□□ -1.77
NPC1-208ENST00000590301 C20orf166-AS1Q96NR2 134 aa3.97□□□□□ -1.77
NPC1-208ENST00000590301 A0A087WSZ3 146 aa3.96□□□□□ -1.78
NPC1-208ENST00000590301 HSD52Q0P140 79 aa3.96□□□□□ -1.78
NPC1-208ENST00000590301 FLGP20930 4061 aaPredicted RBP3.95□□□□□ -1.78
NPC1-208ENST00000590301 A8MUU9 505 aa3.95□□□□□ -1.78
NPC1-208ENST00000590301 DNAL4O96015 105 aa3.95□□□□□ -1.78
NPC1-208ENST00000590301 UQCR10Q9UDW1 63 aa3.95□□□□□ -1.78
NPC1-208ENST00000590301 TRBV7-4A0A0J9YYF1 115 aa3.94□□□□□ -1.78
NPC1-208ENST00000590301 K7ERJ3 54 aa3.94□□□□□ -1.78
NPC1-208ENST00000590301 OCR1Q9BZK8 76 aa3.94□□□□□ -1.78
NPC1-208ENST00000590301 TRBV20-1A0A075B6N2 111 aa3.93□□□□□ -1.78
NPC1-208ENST00000590301 COX6CP09669 75 aa3.93□□□□□ -1.78
NPC1-208ENST00000590301 ANKRD29Q8N6D5 301 aa3.93□□□□□ -1.78
NPC1-208ENST00000590301 ORMDL1Q9P0S3 153 aa3.93□□□□□ -1.78
NPC1-208ENST00000590301 V9GYY9 64 aa3.93□□□□□ -1.78
NPC1-208ENST00000590301 A0A1W2PNM2 257 aa3.92□□□□□ -1.78
NPC1-208ENST00000590301 TMEM256-PLSCR3K7ERE1 68 aa3.92□□□□□ -1.78
NPC1-208ENST00000590301 PSMB2P49721 201 aa3.92□□□□□ -1.78
NPC1-208ENST00000590301 KRTAP15-1Q3LI76 137 aa3.92□□□□□ -1.78
NPC1-208ENST00000590301 SIGMAR1Q99720 223 aa3.92□□□□□ -1.78
NPC1-208ENST00000590301 LINC00313P59037 77 aa3.91□□□□□ -1.78
NPC1-208ENST00000590301 IGKV2-30P06310 120 aa3.9□□□□□ -1.79
NPC1-208ENST00000590301 DSCR10P59022 87 aa3.9□□□□□ -1.79
NPC1-208ENST00000590301 TRACP01848 142 aa3.89□□□□□ -1.79
NPC1-208ENST00000590301 IGKV4-1P06312 121 aa3.89□□□□□ -1.79
NPC1-208ENST00000590301 LOC105371267A0A1B0GV96 52 aa3.88□□□□□ -1.79
NPC1-208ENST00000590301 CCKP06307 115 aa3.88□□□□□ -1.79
NPC1-208ENST00000590301 SMIM6P0DI80 62 aa3.87□□□□□ -1.79
NPC1-208ENST00000590301 LINC00472Q9H8W2 130 aa3.87□□□□□ -1.79
NPC1-208ENST00000590301 KRTAP16-1A8MUX0 517 aa3.86□□□□□ -1.79
NPC1-208ENST00000590301 C8orf87E5RJ46 101 aa3.86□□□□□ -1.79
NPC1-208ENST00000590301 C5orf47Q569G3 176 aa3.86□□□□□ -1.79
NPC1-208ENST00000590301 IGHV6-1A0A0B4J1U7 121 aa3.85□□□□□ -1.79
NPC1-208ENST00000590301 A0A1B0GV72 72 aa3.85□□□□□ -1.79
NPC1-208ENST00000590301 J3KT08 172 aa3.85□□□□□ -1.79
NPC1-208ENST00000590301 SCGB1C2P0DMR2 95 aa3.85□□□□□ -1.79
NPC1-208ENST00000590301 RBM3P98179 157 aaKnown RBP3.85□□□□□ -1.79
NPC1-208ENST00000590301 DSCR8Q96T75 97 aa3.85□□□□□ -1.79
NPC1-208ENST00000590301 RBM12B-AS1Q9P1G2 102 aa3.85□□□□□ -1.79
NPC1-208ENST00000590301 FAM236DA0A1B0GTK5 79 aa3.84□□□□□ -1.79
NPC1-208ENST00000590301 FAM236CP0DP71 79 aa3.84□□□□□ -1.79
NPC1-208ENST00000590301 A0A1B0GVX0 72 aa3.83□□□□□ -1.8
NPC1-208ENST00000590301 DEFB116Q30KQ4 102 aa3.83□□□□□ -1.8
NPC1-208ENST00000590301 NAA38Q9BRA0 125 aaKnown RBP3.83□□□□□ -1.8
NPC1-208ENST00000590301 A0A1B0GW54 56 aa3.82□□□□□ -1.8
NPC1-208ENST00000590301 C9JAW5 83 aa3.82□□□□□ -1.8
NPC1-208ENST00000590301 M0R143 59 aa3.82□□□□□ -1.8
NPC1-208ENST00000590301 NOTCH2NLQ7Z3S9 236 aa3.82□□□□□ -1.8
NPC1-208ENST00000590301 VPS25Q9BRG1 176 aa3.82□□□□□ -1.8
NPC1-208ENST00000590301 BAALC-AS2P0C853 105 aa3.81□□□□□ -1.8
NPC1-208ENST00000590301 HRES1P13985 223 aa3.81□□□□□ -1.8
NPC1-208ENST00000590301 Q6ZQT0 140 aa3.81□□□□□ -1.8
NPC1-208ENST00000590301 JMJD7-PLA2G4BH0Y9G9 81 aa3.8□□□□□ -1.8
NPC1-208ENST00000590301 NDUFB1O75438 58 aa3.8□□□□□ -1.8
NPC1-208ENST00000590301 PDE6GP18545 87 aa3.8□□□□□ -1.8
NPC1-208ENST00000590301 ATXN8Q156A1 80 aa3.79□□□□□ -1.8
NPC1-208ENST00000590301 ZCCHC13Q8WW36 166 aaKnown RBP3.79□□□□□ -1.8
NPC1-208ENST00000590301 USH2AO75445 5202 aa3.78□□□□□ -1.8
NPC1-208ENST00000590301 LOC110117498A0A087WWA1 95 aa3.78□□□□□ -1.8
NPC1-208ENST00000590301 A8MWP4 228 aa3.77□□□□□ -1.81
NPC1-208ENST00000590301 TSTD3H0UI37 97 aa3.77□□□□□ -1.81
NPC1-208ENST00000590301 TAX1BP3O14907 124 aa3.77□□□□□ -1.81
NPC1-208ENST00000590301 MT2AP02795 61 aa3.77□□□□□ -1.81
NPC1-208ENST00000590301 Q8N9P0 234 aaPredicted RBP3.77□□□□□ -1.81
NPC1-208ENST00000590301 IGKV2D-30A0A075B6S6 120 aa3.76□□□□□ -1.81
NPC1-208ENST00000590301 SPINK7P58062 85 aa3.76□□□□□ -1.81
NPC1-208ENST00000590301 LYRM7Q5U5X0 104 aa3.76□□□□□ -1.81
NPC1-208ENST00000590301 BATFQ16520 125 aa3.74□□□□□ -1.81
NPC1-208ENST00000590301 C8orf17Q9NRJ1 99 aa3.74□□□□□ -1.81
NPC1-208ENST00000590301 IGKV3D-7A0A0C4DH55 119 aa3.73□□□□□ -1.81
NPC1-208ENST00000590301 A0A1W2PPM0 123 aa3.73□□□□□ -1.81
NPC1-208ENST00000590301 KRTAP10-10P60014 251 aa3.73□□□□□ -1.81
NPC1-208ENST00000590301 SSPOA2VEC9 5147 aa3.72□□□□□ -1.81
NPC1-208ENST00000590301 MT1FP04733 61 aa3.72□□□□□ -1.81
NPC1-208ENST00000590301 CXCL6P80162 114 aa3.72□□□□□ -1.81
NPC1-208ENST00000590301 NREPQ16612 68 aa3.72□□□□□ -1.81
NPC1-208ENST00000590301 PRR15Q8IV56 129 aa3.72□□□□□ -1.81
NPC1-208ENST00000590301 WFDC13Q8IUB5 93 aa3.71□□□□□ -1.82
NPC1-208ENST00000590301 C14orf132Q9NPU4 83 aa3.71□□□□□ -1.82
NPC1-208ENST00000590301 FCGBPQ9Y6R7 5405 aaPredicted RBP3.71□□□□□ -1.82
NPC1-208ENST00000590301 FAM240AA0A1B0GVK7 77 aa3.7□□□□□ -1.82
NPC1-208ENST00000590301 NDUFAF8A1L188 74 aa3.7□□□□□ -1.82
NPC1-208ENST00000590301 H3BT86 120 aa3.7□□□□□ -1.82
NPC1-208ENST00000590301 TMEM254Q8TBM7 123 aa3.7□□□□□ -1.82
NPC1-208ENST00000590301 MRPL34Q9BQ48 92 aaKnown RBP3.69□□□□□ -1.82
NPC1-208ENST00000590301 MMP24-AS1A0A0U1RRL7 71 aa3.68□□□□□ -1.82
NPC1-208ENST00000590301 LINC00846Q9NV44 126 aa3.68□□□□□ -1.82
NPC1-208ENST00000590301 PRO0461Q9UI25 63 aa3.68□□□□□ -1.82
NPC1-208ENST00000590301 hDV103S1A0JD37 113 aa3.67□□□□□ -1.82
NPC1-208ENST00000590301 K7EQZ3 153 aa3.65□□□□□ -1.83
NPC1-208ENST00000590301 BPY2O14599 106 aa3.65□□□□□ -1.83
NPC1-208ENST00000590301 H1FX-AS1Q4G0G2 97 aa3.65□□□□□ -1.83
NPC1-208ENST00000590301 SPCS1Q9Y6A9 102 aa3.65□□□□□ -1.83
NPC1-208ENST00000590301 NDUFS5O43920 106 aa3.64□□□□□ -1.83
NPC1-208ENST00000590301 COL5A1-AS1Q5SY13 56 aa3.64□□□□□ -1.83
NPC1-208ENST00000590301 C7orf65Q6ZTY9 151 aa3.63□□□□□ -1.83
NPC1-208ENST00000590301 K7EP34 96 aa3.62□□□□□ -1.83
NPC1-208ENST00000590301 CASC2Q6XLA1 102 aa3.61□□□□□ -1.83
NPC1-208ENST00000590301 KRTAP19-6Q3LI70 58 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms