RNA–Protein interactions for RNA: ENST00000590035.5

RETREG3-209, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 518 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-209ENST00000590035 TRIAP1O43715 76 aa5.12□□□□□ -1.59
RETREG3-209ENST00000590035 FABP2P12104 132 aa5.12□□□□□ -1.59
RETREG3-209ENST00000590035 CEND1Q8N111 149 aa5.12□□□□□ -1.59
RETREG3-209ENST00000590035 PRO1854Q9UHT4 67 aa5.12□□□□□ -1.59
RETREG3-209ENST00000590035 IGKV4-1P06312 121 aa5.11□□□□□ -1.59
RETREG3-209ENST00000590035 FXYD2P54710 66 aa5.11□□□□□ -1.59
RETREG3-209ENST00000590035 SPATA45Q537H7 98 aa5.1□□□□□ -1.59
RETREG3-209ENST00000590035 ANKRD29Q8N6D5 301 aa5.1□□□□□ -1.59
RETREG3-209ENST00000590035 PAM16Q9Y3D7 125 aa5.1□□□□□ -1.59
RETREG3-209ENST00000590035 MACF1Q9UPN3 7388 aaKnown RBP5.09□□□□□ -1.59
RETREG3-209ENST00000590035 SYNE2Q8WXH0 6885 aaKnown RBP5.09□□□□□ -1.59
RETREG3-209ENST00000590035 KRTAP10-10P60014 251 aa5.09□□□□□ -1.59
RETREG3-209ENST00000590035 RBM12B-AS1Q9P1G2 102 aa5.09□□□□□ -1.59
RETREG3-209ENST00000590035 FAM236DA0A1B0GTK5 79 aa5.08□□□□□ -1.6
RETREG3-209ENST00000590035 FAM236CP0DP71 79 aa5.08□□□□□ -1.6
RETREG3-209ENST00000590035 H3BQ85 93 aa5.07□□□□□ -1.6
RETREG3-209ENST00000590035 S100A1P23297 94 aa5.07□□□□□ -1.6
RETREG3-209ENST00000590035 DEFB116Q30KQ4 102 aa5.07□□□□□ -1.6
RETREG3-209ENST00000590035 ORMDL1Q9P0S3 153 aa5.07□□□□□ -1.6
RETREG3-209ENST00000590035 CCKP06307 115 aa5.06□□□□□ -1.6
RETREG3-209ENST00000590035 KRTAP19-6Q3LI70 58 aa5.06□□□□□ -1.6
RETREG3-209ENST00000590035 VAMP8Q9BV40 100 aa5.06□□□□□ -1.6
RETREG3-209ENST00000590035 IGHV6-1A0A0B4J1U7 121 aa5.05□□□□□ -1.6
RETREG3-209ENST00000590035 UBE2V1Q13404 147 aa5.05□□□□□ -1.6
RETREG3-209ENST00000590035 A0A1B0GVX0 72 aa5.04□□□□□ -1.6
RETREG3-209ENST00000590035 C8orf87E5RJ46 101 aa5.04□□□□□ -1.6
RETREG3-209ENST00000590035 TMEM256-PLSCR3K7ERE1 68 aa5.04□□□□□ -1.6
RETREG3-209ENST00000590035 A0A1B0GV72 72 aa5.03□□□□□ -1.6
RETREG3-209ENST00000590035 LOC105371267A0A1B0GV96 52 aa5.03□□□□□ -1.6
RETREG3-209ENST00000590035 TRACP01848 142 aa5.03□□□□□ -1.6
RETREG3-209ENST00000590035 ZCCHC13Q8WW36 166 aaKnown RBP5.03□□□□□ -1.6
RETREG3-209ENST00000590035 K7ERJ3 54 aa5.02□□□□□ -1.61
RETREG3-209ENST00000590035 DNAL4O96015 105 aa5.02□□□□□ -1.61
RETREG3-209ENST00000590035 Q8N9P0 234 aaPredicted RBP5.02□□□□□ -1.61
RETREG3-209ENST00000590035 SPINK7P58062 85 aa5.01□□□□□ -1.61
RETREG3-209ENST00000590035 HSD52Q0P140 79 aa5.01□□□□□ -1.61
RETREG3-209ENST00000590035 KRTAP15-1Q3LI76 137 aa5.01□□□□□ -1.61
RETREG3-209ENST00000590035 MTURNQ8N3F0 131 aa4.98□□□□□ -1.61
RETREG3-209ENST00000590035 J3KT08 172 aa4.97□□□□□ -1.61
RETREG3-209ENST00000590035 COX6CP09669 75 aa4.97□□□□□ -1.61
RETREG3-209ENST00000590035 PSMB2P49721 201 aa4.97□□□□□ -1.61
RETREG3-209ENST00000590035 RBM3P98179 157 aaKnown RBP4.97□□□□□ -1.61
RETREG3-209ENST00000590035 PYY3Q5JQD4 70 aa4.97□□□□□ -1.61
RETREG3-209ENST00000590035 Q6ZQT0 140 aa4.97□□□□□ -1.61
RETREG3-209ENST00000590035 A8MWP4 228 aa4.96□□□□□ -1.62
RETREG3-209ENST00000590035 PCP4P48539 62 aa4.94□□□□□ -1.62
RETREG3-209ENST00000590035 WFDC13Q8IUB5 93 aa4.93□□□□□ -1.62
RETREG3-209ENST00000590035 DSCR8Q96T75 97 aa4.93□□□□□ -1.62
RETREG3-209ENST00000590035 VPS25Q9BRG1 176 aa4.93□□□□□ -1.62
RETREG3-209ENST00000590035 C8orf17Q9NRJ1 99 aa4.93□□□□□ -1.62
RETREG3-209ENST00000590035 LINC00846Q9NV44 126 aa4.92□□□□□ -1.62
RETREG3-209ENST00000590035 IGKV3D-7A0A0C4DH55 119 aa4.91□□□□□ -1.62
RETREG3-209ENST00000590035 A0A1B0GW54 56 aa4.91□□□□□ -1.62
RETREG3-209ENST00000590035 C9JAW5 83 aa4.91□□□□□ -1.62
RETREG3-209ENST00000590035 KRTAP6-3Q3LI67 103 aa4.91□□□□□ -1.62
RETREG3-209ENST00000590035 BAALC-AS2P0C853 105 aa4.9□□□□□ -1.63
RETREG3-209ENST00000590035 UQCR10Q9UDW1 63 aa4.9□□□□□ -1.63
RETREG3-209ENST00000590035 LOC110117498A0A087WWA1 95 aa4.89□□□□□ -1.63
RETREG3-209ENST00000590035 NDUFB1O75438 58 aa4.89□□□□□ -1.63
RETREG3-209ENST00000590035 Q6ZVQ6 151 aa4.87□□□□□ -1.63
RETREG3-209ENST00000590035 PRR15Q8IV56 129 aa4.87□□□□□ -1.63
RETREG3-209ENST00000590035 MMP24-AS1A0A0U1RRL7 71 aa4.86□□□□□ -1.63
RETREG3-209ENST00000590035 SCGB1C2P0DMR2 95 aa4.86□□□□□ -1.63
RETREG3-209ENST00000590035 JMJD7-PLA2G4BH0Y9G9 81 aa4.85□□□□□ -1.63
RETREG3-209ENST00000590035 H1FX-AS1Q4G0G2 97 aa4.85□□□□□ -1.63
RETREG3-209ENST00000590035 TMEM254Q8TBM7 123 aa4.84□□□□□ -1.63
RETREG3-209ENST00000590035 PDE6GP18545 87 aa4.83□□□□□ -1.64
RETREG3-209ENST00000590035 MRPL34Q9BQ48 92 aaKnown RBP4.82□□□□□ -1.64
RETREG3-209ENST00000590035 NEBP20929 6669 aa4.82□□□□□ -1.64
RETREG3-209ENST00000590035 ATXN8Q156A1 80 aa4.81□□□□□ -1.64
RETREG3-209ENST00000590035 LYRM7Q5U5X0 104 aa4.8□□□□□ -1.64
RETREG3-209ENST00000590035 C14orf132Q9NPU4 83 aa4.8□□□□□ -1.64
RETREG3-209ENST00000590035 Q5W150 140 aa4.79□□□□□ -1.64
RETREG3-209ENST00000590035 MUC12Q9UKN1 5478 aa4.78□□□□□ -1.64
RETREG3-209ENST00000590035 hDV103S1A0JD37 113 aa4.78□□□□□ -1.64
RETREG3-209ENST00000590035 K7EQZ3 153 aa4.78□□□□□ -1.64
RETREG3-209ENST00000590035 NAA38Q9BRA0 125 aaKnown RBP4.78□□□□□ -1.64
RETREG3-209ENST00000590035 NREPQ16612 68 aa4.77□□□□□ -1.65
RETREG3-209ENST00000590035 MT1BP07438 61 aa4.76□□□□□ -1.65
RETREG3-209ENST00000590035 M0R143 59 aa4.74□□□□□ -1.65
RETREG3-209ENST00000590035 C7orf65Q6ZTY9 151 aa4.74□□□□□ -1.65
RETREG3-209ENST00000590035 IGKV2D-30A0A075B6S6 120 aa4.73□□□□□ -1.65
RETREG3-209ENST00000590035 IGKV2-30P06310 120 aa4.73□□□□□ -1.65
RETREG3-209ENST00000590035 KRTAP19-8Q3LI54 63 aa4.72□□□□□ -1.65
RETREG3-209ENST00000590035 SPRR2GQ9BYE4 73 aa4.71□□□□□ -1.66
RETREG3-209ENST00000590035 PCP4L1A6NKN8 68 aa4.7□□□□□ -1.66
RETREG3-209ENST00000590035 NDUFS5O43920 106 aa4.7□□□□□ -1.66
RETREG3-209ENST00000590035 H3BT86 120 aa4.69□□□□□ -1.66
RETREG3-209ENST00000590035 C4orf26Q17RF5 130 aa4.69□□□□□ -1.66
RETREG3-209ENST00000590035 KMT2DO14686 5537 aa4.68□□□□□ -1.66
RETREG3-209ENST00000590035 A6NN06 94 aa4.67□□□□□ -1.66
RETREG3-209ENST00000590035 BPY2O14599 106 aa4.67□□□□□ -1.66
RETREG3-209ENST00000590035 KRTAP10-5P60370 271 aa4.66□□□□□ -1.66
RETREG3-209ENST00000590035 Q8N9L7 120 aa4.66□□□□□ -1.66
RETREG3-209ENST00000590035 MDN1Q9NU22 5596 aa4.66□□□□□ -1.66
RETREG3-209ENST00000590035 HCG22E2RYF7 251 aa4.65□□□□□ -1.67
RETREG3-209ENST00000590035 KRTAP5-9P26371 169 aa4.65□□□□□ -1.67
RETREG3-209ENST00000590035 CASC2Q6XLA1 102 aa4.65□□□□□ -1.67
RETREG3-209ENST00000590035 CXCL6P80162 114 aa4.64□□□□□ -1.67
RETREG3-209ENST00000590035 C5orf47Q569G3 176 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms