RNA–Protein interactions for RNA: ENST00000588885.1

RFX1-204, Transcript of regulatory factor X1, humanhuman

TSL 3

Gene RFX1, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-204ENST00000588885 LOC110117498A0A087WWA1 95 aa6.51□□□□□ -1.37
RFX1-204ENST00000588885 Q6ZQT0 140 aa6.51□□□□□ -1.37
RFX1-204ENST00000588885 FP248Q71RG6 208 aaPredicted RBP6.51□□□□□ -1.37
RFX1-204ENST00000588885 DSCR8Q96T75 97 aa6.51□□□□□ -1.37
RFX1-204ENST00000588885 Q6JHZ5 121 aa6.5□□□□□ -1.37
RFX1-204ENST00000588885 HRCT1Q6UXD1 115 aa6.5□□□□□ -1.37
RFX1-204ENST00000588885 A0A1W2PNM2 257 aa6.49□□□□□ -1.37
RFX1-204ENST00000588885 VPS25Q9BRG1 176 aa6.49□□□□□ -1.37
RFX1-204ENST00000588885 KRTAP13-3Q3SY46 172 aa6.48□□□□□ -1.37
RFX1-204ENST00000588885 CCKP06307 115 aa6.47□□□□□ -1.37
RFX1-204ENST00000588885 PDE6GP18545 87 aa6.45□□□□□ -1.38
RFX1-204ENST00000588885 RPS29P62273 56 aaKnown RBP6.45□□□□□ -1.38
RFX1-204ENST00000588885 Q6Q795 121 aa6.43□□□□□ -1.38
RFX1-204ENST00000588885 TRBV7-7A0A0K0K1E9 115 aa6.42□□□□□ -1.38
RFX1-204ENST00000588885 A0A087WSZ3 146 aa6.41□□□□□ -1.38
RFX1-204ENST00000588885 C21orf62-AS1Q17RA5 79 aa6.41□□□□□ -1.38
RFX1-204ENST00000588885 CD164Q04900 197 aa6.4□□□□□ -1.38
RFX1-204ENST00000588885 FAM240AA0A1B0GVK7 77 aa6.39□□□□□ -1.39
RFX1-204ENST00000588885 J3QR89 54 aa6.39□□□□□ -1.39
RFX1-204ENST00000588885 LINC00846Q9NV44 126 aa6.39□□□□□ -1.39
RFX1-204ENST00000588885 SEC61BP60468 96 aaKnown RBP6.38□□□□□ -1.39
RFX1-204ENST00000588885 ASB16-AS1Q495Z4 193 aa6.38□□□□□ -1.39
RFX1-204ENST00000588885 LIMD2Q9BT23 127 aa6.38□□□□□ -1.39
RFX1-204ENST00000588885 K7ERU9 68 aa6.37□□□□□ -1.39
RFX1-204ENST00000588885 KRTAP4-1Q9BYQ7 146 aa6.37□□□□□ -1.39
RFX1-204ENST00000588885 C9orf92A6NGG3 77 aa6.36□□□□□ -1.39
RFX1-204ENST00000588885 A0A1B0GW54 56 aa6.35□□□□□ -1.39
RFX1-204ENST00000588885 ACYP1P07311 99 aa6.35□□□□□ -1.39
RFX1-204ENST00000588885 Q6ZVQ6 151 aa6.34□□□□□ -1.39
RFX1-204ENST00000588885 SS18L2Q9UHA2 77 aa6.34□□□□□ -1.39
RFX1-204ENST00000588885 Q5XG85 94 aa6.32□□□□□ -1.4
RFX1-204ENST00000588885 Q96NJ1 140 aa6.32□□□□□ -1.4
RFX1-204ENST00000588885 UBL5Q9BZL1 73 aa6.32□□□□□ -1.4
RFX1-204ENST00000588885 NREPQ16612 68 aa6.31□□□□□ -1.4
RFX1-204ENST00000588885 C1orf195Q5TG92 126 aa6.31□□□□□ -1.4
RFX1-204ENST00000588885 DEFB116Q30KQ4 102 aa6.29□□□□□ -1.4
RFX1-204ENST00000588885 PCOTHQ58A44 107 aa6.29□□□□□ -1.4
RFX1-204ENST00000588885 LINC00472Q9H8W2 130 aa6.29□□□□□ -1.4
RFX1-204ENST00000588885 SIGMAR1Q99720 223 aa6.27□□□□□ -1.41
RFX1-204ENST00000588885 IGKV3D-7A0A0C4DH55 119 aa6.26□□□□□ -1.41
RFX1-204ENST00000588885 BPY2O14599 106 aa6.25□□□□□ -1.41
RFX1-204ENST00000588885 IGKV4-1P06312 121 aa6.25□□□□□ -1.41
RFX1-204ENST00000588885 LINC00643Q86TS7 51 aa6.25□□□□□ -1.41
RFX1-204ENST00000588885 DSCR10P59022 87 aa6.24□□□□□ -1.41
RFX1-204ENST00000588885 ATP5EP2Q5VTU8 51 aa6.23□□□□□ -1.41
RFX1-204ENST00000588885 Q8N9L7 120 aa6.23□□□□□ -1.41
RFX1-204ENST00000588885 J3KT08 172 aa6.22□□□□□ -1.41
RFX1-204ENST00000588885 MT-ATP8P03928 68 aa6.22□□□□□ -1.41
RFX1-204ENST00000588885 K7EQZ3 153 aa6.21□□□□□ -1.42
RFX1-204ENST00000588885 CXCL6P80162 114 aa6.21□□□□□ -1.42
RFX1-204ENST00000588885 A8MWP4 228 aa6.2□□□□□ -1.42
RFX1-204ENST00000588885 A0A1B0GVX0 72 aa6.18□□□□□ -1.42
RFX1-204ENST00000588885 IGHV6-1A0A0B4J1U7 121 aa6.17□□□□□ -1.42
RFX1-204ENST00000588885 RPL37P61927 97 aaKnown RBP6.17□□□□□ -1.42
RFX1-204ENST00000588885 PRR15Q8IV56 129 aa6.17□□□□□ -1.42
RFX1-204ENST00000588885 A0A087WVE0 104 aa6.15□□□□□ -1.42
RFX1-204ENST00000588885 NDUFB1O75438 58 aa6.15□□□□□ -1.42
RFX1-204ENST00000588885 HIST1H4AP62805 103 aaKnown RBP6.15□□□□□ -1.42
RFX1-204ENST00000588885 MMP24-AS1A0A0U1RRL7 71 aa6.14□□□□□ -1.43
RFX1-204ENST00000588885 KRTAP19-2Q3LHN2 52 aa6.14□□□□□ -1.43
RFX1-204ENST00000588885 NOTCH2NLQ7Z3S9 236 aa6.14□□□□□ -1.43
RFX1-204ENST00000588885 C8orf17Q9NRJ1 99 aa6.13□□□□□ -1.43
RFX1-204ENST00000588885 C8orf87E5RJ46 101 aa6.12□□□□□ -1.43
RFX1-204ENST00000588885 COX6B2Q6YFQ2 88 aa6.12□□□□□ -1.43
RFX1-204ENST00000588885 FSIP2Q5CZC0 6907 aa6.11□□□□□ -1.43
RFX1-204ENST00000588885 WFDC13Q8IUB5 93 aa6.11□□□□□ -1.43
RFX1-204ENST00000588885 HCG22E2RYF7 251 aa6.1□□□□□ -1.43
RFX1-204ENST00000588885 M0R2T5 61 aa6.1□□□□□ -1.43
RFX1-204ENST00000588885 MT1HP80294 61 aa6.1□□□□□ -1.43
RFX1-204ENST00000588885 KRTAP16-1A8MUX0 517 aa6.09□□□□□ -1.43
RFX1-204ENST00000588885 IMUPQ9GZP8 106 aa6.09□□□□□ -1.43
RFX1-204ENST00000588885 LINC00313P59037 77 aa6.08□□□□□ -1.44
RFX1-204ENST00000588885 ATP11AUNQ6ZP68 121 aa6.08□□□□□ -1.44
RFX1-204ENST00000588885 CASC2Q6XLA1 102 aa6.07□□□□□ -1.44
RFX1-204ENST00000588885 hDV103S1A0JD37 113 aa6.06□□□□□ -1.44
RFX1-204ENST00000588885 Q75L30 129 aa6.06□□□□□ -1.44
RFX1-204ENST00000588885 TMEM254Q8TBM7 123 aa6.06□□□□□ -1.44
RFX1-204ENST00000588885 FLGP20930 4061 aaPredicted RBP6.05□□□□□ -1.44
RFX1-204ENST00000588885 FAM236AA0A1B0GUQ0 79 aa6.05□□□□□ -1.44
RFX1-204ENST00000588885 FAM236BA0A1B0GV22 79 aa6.05□□□□□ -1.44
RFX1-204ENST00000588885 MRPL34Q9BQ48 92 aaKnown RBP6.04□□□□□ -1.44
RFX1-204ENST00000588885 CRCT1Q9UGL9 99 aa6.04□□□□□ -1.44
RFX1-204ENST00000588885 C20orf166-AS1Q96NR2 134 aa6□□□□□ -1.45
RFX1-204ENST00000588885 A8MUU9 505 aa5.99□□□□□ -1.45
RFX1-204ENST00000588885 NDUFS5O43920 106 aa5.99□□□□□ -1.45
RFX1-204ENST00000588885 Q8N9P0 234 aaPredicted RBP5.99□□□□□ -1.45
RFX1-204ENST00000588885 KRTAP10-6P60371 365 aaPredicted RBP5.98□□□□□ -1.45
RFX1-204ENST00000588885 SCGB1A1P11684 91 aa5.95□□□□□ -1.46
RFX1-204ENST00000588885 ATOX1O00244 68 aa5.94□□□□□ -1.46
RFX1-204ENST00000588885 OCR1Q9BZK8 76 aa5.94□□□□□ -1.46
RFX1-204ENST00000588885 ZCCHC13Q8WW36 166 aaKnown RBP5.91□□□□□ -1.46
RFX1-204ENST00000588885 TP53AIP1Q9HCN2 124 aa5.9□□□□□ -1.46
RFX1-204ENST00000588885 UQCRQO14949 82 aa5.89□□□□□ -1.47
RFX1-204ENST00000588885 Q5W150 140 aa5.89□□□□□ -1.47
RFX1-204ENST00000588885 TRAV7A0A075B6U4 112 aa5.88□□□□□ -1.47
RFX1-204ENST00000588885 TRAV22A0A0B4J277 110 aa5.87□□□□□ -1.47
RFX1-204ENST00000588885 SMIM20Q8N5G0 67 aa5.87□□□□□ -1.47
RFX1-204ENST00000588885 H0Y9P7 68 aa5.86□□□□□ -1.47
RFX1-204ENST00000588885 SERP2Q8N6R1 65 aa5.85□□□□□ -1.47
RFX1-204ENST00000588885 ANAPC13Q9BS18 74 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 130.8 ms