RNA–Protein interactions for RNA: ENST00000588074.1

LINC01538-201, Transcript of long intergenic non-protein coding RNA 1538, humanhuman

TSL 1 (best) BASIC

Gene LINC01538, Length 2,408 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01538-201ENST00000588074 NAV2Q8IVL1 2488 aa3.19□□□□□ -1.9
LINC01538-201ENST00000588074 H3BUX3 64 aa3.19□□□□□ -1.9
LINC01538-201ENST00000588074 KRTAP13-3Q3SY46 172 aa3.19□□□□□ -1.9
LINC01538-201ENST00000588074 SETXQ7Z333 2677 aaKnown RBP3.18□□□□□ -1.9
LINC01538-201ENST00000588074 A0A1W2PNN7 141 aa3.18□□□□□ -1.9
LINC01538-201ENST00000588074 H0YAA0 97 aa3.18□□□□□ -1.9
LINC01538-201ENST00000588074 SMR3AQ99954 134 aa3.18□□□□□ -1.9
LINC01538-201ENST00000588074 APCP25054 2843 aa3.18□□□□□ -1.9
LINC01538-201ENST00000588074 ITPR2Q14571 2701 aa3.17□□□□□ -1.9
LINC01538-201ENST00000588074 CUBNO60494 3623 aa3.17□□□□□ -1.9
LINC01538-201ENST00000588074 PRO0255Q9UI72 69 aa3.17□□□□□ -1.9
LINC01538-201ENST00000588074 DEFB136Q30KP8 78 aa3.15□□□□□ -1.9
LINC01538-201ENST00000588074 SPRR1BP22528 89 aa3.15□□□□□ -1.91
LINC01538-201ENST00000588074 CRIPTQ9P021 101 aa3.15□□□□□ -1.91
LINC01538-201ENST00000588074 PDZD2O15018 2839 aa3.15□□□□□ -1.91
LINC01538-201ENST00000588074 A0A0G2JQZ4 141 aa3.14□□□□□ -1.91
LINC01538-201ENST00000588074 Q6ZSA8 131 aa3.14□□□□□ -1.91
LINC01538-201ENST00000588074 AKAP9Q99996 3911 aa3.14□□□□□ -1.91
LINC01538-201ENST00000588074 OTOGQ6ZRI0 2925 aa3.14□□□□□ -1.91
LINC01538-201ENST00000588074 TEX15Q9BXT5 2789 aa3.14□□□□□ -1.91
LINC01538-201ENST00000588074 TPRXLQ17RH7 258 aa3.13□□□□□ -1.91
LINC01538-201ENST00000588074 LY6EQ16553 131 aa3.13□□□□□ -1.91
LINC01538-201ENST00000588074 CSPG4Q6UVK1 2322 aa3.13□□□□□ -1.91
LINC01538-201ENST00000588074 MYO9AB2RTY4 2548 aa3.13□□□□□ -1.91
LINC01538-201ENST00000588074 CREBBPQ92793 2442 aa3.13□□□□□ -1.91
LINC01538-201ENST00000588074 ACANP16112 2415 aa3.12□□□□□ -1.91
LINC01538-201ENST00000588074 LELP1Q5T871 98 aa3.12□□□□□ -1.91
LINC01538-201ENST00000588074 C4orf3Q8WVX3 66 aa3.12□□□□□ -1.91
LINC01538-201ENST00000588074 ZANQ9Y493 2812 aa3.12□□□□□ -1.91
LINC01538-201ENST00000588074 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.12□□□□□ -1.91
LINC01538-201ENST00000588074 A0A1B0GU33 70 aa3.11□□□□□ -1.91
LINC01538-201ENST00000588074 ITPR3Q14573 2671 aa3.11□□□□□ -1.91
LINC01538-201ENST00000588074 FLNAP21333 2647 aaKnown RBP3.11□□□□□ -1.91
LINC01538-201ENST00000588074 TLN2Q9Y4G6 2542 aa3.1□□□□□ -1.91
LINC01538-201ENST00000588074 SONP18583 2426 aaKnown RBP3.1□□□□□ -1.91
LINC01538-201ENST00000588074 MAST4O15021 2626 aa3.1□□□□□ -1.91
LINC01538-201ENST00000588074 H1FX-AS1Q4G0G2 97 aa3.1□□□□□ -1.91
LINC01538-201ENST00000588074 K7EIL1 84 aa3.09□□□□□ -1.91
LINC01538-201ENST00000588074 TEP1Q99973 2627 aaKnown RBP3.09□□□□□ -1.92
LINC01538-201ENST00000588074 HIVEP1P15822 2718 aa3.09□□□□□ -1.92
LINC01538-201ENST00000588074 A0A096LPF7 62 aa3.09□□□□□ -1.92
LINC01538-201ENST00000588074 DEFB130BP0DP73 79 aa3.09□□□□□ -1.92
LINC01538-201ENST00000588074 DEFB130AP0DP74 79 aa3.09□□□□□ -1.92
LINC01538-201ENST00000588074 ABCA2Q9BZC7 2435 aa3.08□□□□□ -1.92
LINC01538-201ENST00000588074 F8P00451 2351 aa3.08□□□□□ -1.92
LINC01538-201ENST00000588074 MTORP42345 2549 aa3.08□□□□□ -1.92
LINC01538-201ENST00000588074 HIVEP2P31629 2446 aa3.07□□□□□ -1.92
LINC01538-201ENST00000588074 C10orf99Q6UWK7 81 aa3.07□□□□□ -1.92
LINC01538-201ENST00000588074 COX6B2Q6YFQ2 88 aa3.07□□□□□ -1.92
LINC01538-201ENST00000588074 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.05□□□□□ -1.92
LINC01538-201ENST00000588074 FN1P02751 2386 aaKnown RBP3.05□□□□□ -1.92
LINC01538-201ENST00000588074 LCE1AQ5T7P2 110 aa3.05□□□□□ -1.92
LINC01538-201ENST00000588074 ANK3Q12955 4377 aaKnown RBP3.04□□□□□ -1.92
LINC01538-201ENST00000588074 JMJD1CQ15652 2540 aa3.04□□□□□ -1.92
LINC01538-201ENST00000588074 C2CD3Q4AC94 2353 aa3.03□□□□□ -1.92
LINC01538-201ENST00000588074 NIPBLQ6KC79 2804 aaeCLIP3.03□□□□□ -1.92
LINC01538-201ENST00000588074 MXRA5Q9NR99 2828 aa3.03□□□□□ -1.93
LINC01538-201ENST00000588074 PRLHP81277 87 aa3.02□□□□□ -1.93
LINC01538-201ENST00000588074 PRO2289Q9P1D8 64 aa3.02□□□□□ -1.93
LINC01538-201ENST00000588074 SETD2Q9BYW2 2564 aaPredicted RBP3.02□□□□□ -1.93
LINC01538-201ENST00000588074 RPL37P61927 97 aaKnown RBP3.01□□□□□ -1.93
LINC01538-201ENST00000588074 NSD1Q96L73 2696 aaPredicted RBP3.01□□□□□ -1.93
LINC01538-201ENST00000588074 NF1P21359 2839 aa3.01□□□□□ -1.93
LINC01538-201ENST00000588074 TENM2Q9NT68 2774 aa3.01□□□□□ -1.93
LINC01538-201ENST00000588074 FBN1P35555 2871 aaKnown RBP3□□□□□ -1.93
LINC01538-201ENST00000588074 C10orf95Q9H7T3 257 aa3□□□□□ -1.93
LINC01538-201ENST00000588074 R4GN34 69 aa2.99□□□□□ -1.93
LINC01538-201ENST00000588074 PLAC4Q8WY50 150 aa2.98□□□□□ -1.93
LINC01538-201ENST00000588074 ATRQ13535 2644 aa2.98□□□□□ -1.93
LINC01538-201ENST00000588074 LCE1FQ5T754 118 aa2.98□□□□□ -1.93
LINC01538-201ENST00000588074 FLG2Q5D862 2391 aaPredicted RBP2.97□□□□□ -1.93
LINC01538-201ENST00000588074 SPINK1P00995 79 aa2.97□□□□□ -1.93
LINC01538-201ENST00000588074 KRTAP10-3P60369 221 aa2.97□□□□□ -1.93
LINC01538-201ENST00000588074 NOTCH3Q9UM47 2321 aa2.96□□□□□ -1.94
LINC01538-201ENST00000588074 TRRAPQ9Y4A5 3859 aa2.95□□□□□ -1.94
LINC01538-201ENST00000588074 H3BNG1 76 aa2.94□□□□□ -1.94
LINC01538-201ENST00000588074 A0A096LNI7 61 aa2.94□□□□□ -1.94
LINC01538-201ENST00000588074 TENM1Q9UKZ4 2725 aa2.94□□□□□ -1.94
LINC01538-201ENST00000588074 COL6A5A8TX70 2615 aa2.94□□□□□ -1.94
LINC01538-201ENST00000588074 LINC01556Q5JQF7 62 aa2.93□□□□□ -1.94
LINC01538-201ENST00000588074 KRTAP10-11P60412 298 aa2.93□□□□□ -1.94
LINC01538-201ENST00000588074 DNHD1Q96M86 4753 aa2.92□□□□□ -1.94
LINC01538-201ENST00000588074 STAB1Q9NY15 2570 aa2.92□□□□□ -1.94
LINC01538-201ENST00000588074 SPART-AS1P0CW21 52 aa2.91□□□□□ -1.94
LINC01538-201ENST00000588074 SPACA4Q8TDM5 124 aa2.91□□□□□ -1.94
LINC01538-201ENST00000588074 KRTAP13-1Q8IUC0 172 aa2.9□□□□□ -1.95
LINC01538-201ENST00000588074 VWFP04275 2813 aa2.89□□□□□ -1.95
LINC01538-201ENST00000588074 KRTAP1-4P0C5Y4 121 aa2.89□□□□□ -1.95
LINC01538-201ENST00000588074 Q6ZRN7 208 aaPredicted RBP2.89□□□□□ -1.95
LINC01538-201ENST00000588074 HTN3P15516 51 aa2.88□□□□□ -1.95
LINC01538-201ENST00000588074 GPR98Q8WXG9 6306 aa2.88□□□□□ -1.95
LINC01538-201ENST00000588074 SPINK6Q6UWN8 80 aa2.87□□□□□ -1.95
LINC01538-201ENST00000588074 INE1O15225 51 aa2.87□□□□□ -1.95
LINC01538-201ENST00000588074 KRTAP5-9P26371 169 aa2.85□□□□□ -1.95
LINC01538-201ENST00000588074 ANK2Q01484 3957 aa2.85□□□□□ -1.95
LINC01538-201ENST00000588074 PKD1L1Q8TDX9 2849 aa2.85□□□□□ -1.95
LINC01538-201ENST00000588074 S4R3F8 94 aa2.85□□□□□ -1.95
LINC01538-201ENST00000588074 MGAM2Q2M2H8 2515 aa2.85□□□□□ -1.95
LINC01538-201ENST00000588074 MT3P25713 68 aa2.84□□□□□ -1.95
LINC01538-201ENST00000588074 UBE2DNLQ8IWF7 75 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms