RNA–Protein interactions for RNA: ENST00000587560.5

H3F3B-206, Transcript of H3 histone family member 3B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene H3F3B, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-206ENST00000587560 IGKV4-1P06312 121 aa10.09□□□□□ -0.79
H3F3B-206ENST00000587560 J3KT08 172 aa10.08□□□□□ -0.8
H3F3B-206ENST00000587560 UBL5Q9BZL1 73 aa10.05□□□□□ -0.8
H3F3B-206ENST00000587560 DSCR10P59022 87 aa10.03□□□□□ -0.8
H3F3B-206ENST00000587560 SIGMAR1Q99720 223 aa10.03□□□□□ -0.8
H3F3B-206ENST00000587560 A8MWP4 228 aa10.01□□□□□ -0.81
H3F3B-206ENST00000587560 A0A1B0GVX0 72 aa10□□□□□ -0.81
H3F3B-206ENST00000587560 IGKV3D-7A0A0C4DH55 119 aa9.99□□□□□ -0.81
H3F3B-206ENST00000587560 J3QR89 54 aa9.99□□□□□ -0.81
H3F3B-206ENST00000587560 BPY2O14599 106 aa9.99□□□□□ -0.81
H3F3B-206ENST00000587560 A0A0U1RQV1 116 aa9.97□□□□□ -0.81
H3F3B-206ENST00000587560 NOTCH2NLQ7Z3S9 236 aa9.97□□□□□ -0.81
H3F3B-206ENST00000587560 C9orf92A6NGG3 77 aa9.96□□□□□ -0.82
H3F3B-206ENST00000587560 PRR15Q8IV56 129 aa9.96□□□□□ -0.82
H3F3B-206ENST00000587560 XP32Q5T750 250 aa9.95□□□□□ -0.82
H3F3B-206ENST00000587560 KRTAP16-1A8MUX0 517 aa9.94□□□□□ -0.82
H3F3B-206ENST00000587560 CXCL6P80162 114 aa9.94□□□□□ -0.82
H3F3B-206ENST00000587560 C8orf87E5RJ46 101 aa9.93□□□□□ -0.82
H3F3B-206ENST00000587560 K7EQZ3 153 aa9.93□□□□□ -0.82
H3F3B-206ENST00000587560 LCE2DQ5TA82 110 aaPredicted RBP9.93□□□□□ -0.82
H3F3B-206ENST00000587560 IGHV6-1A0A0B4J1U7 121 aa9.92□□□□□ -0.82
H3F3B-206ENST00000587560 NDUFB1O75438 58 aa9.92□□□□□ -0.82
H3F3B-206ENST00000587560 CDIP1Q9H305 208 aa9.92□□□□□ -0.82
H3F3B-206ENST00000587560 K7ERU9 68 aa9.91□□□□□ -0.82
H3F3B-206ENST00000587560 LINC00313P59037 77 aa9.91□□□□□ -0.82
H3F3B-206ENST00000587560 LINC00643Q86TS7 51 aa9.9□□□□□ -0.82
H3F3B-206ENST00000587560 C8orf17Q9NRJ1 99 aa9.89□□□□□ -0.83
H3F3B-206ENST00000587560 ATP5EP2Q5VTU8 51 aa9.88□□□□□ -0.83
H3F3B-206ENST00000587560 Q8N9L7 120 aa9.88□□□□□ -0.83
H3F3B-206ENST00000587560 MMP24-AS1A0A0U1RRL7 71 aa9.87□□□□□ -0.83
H3F3B-206ENST00000587560 C20orf166-AS1Q96NR2 134 aa9.86□□□□□ -0.83
H3F3B-206ENST00000587560 A8MUU9 505 aa9.84□□□□□ -0.83
H3F3B-206ENST00000587560 Q75L30 129 aa9.83□□□□□ -0.84
H3F3B-206ENST00000587560 KRTAP9-7A8MTY7 169 aa9.82□□□□□ -0.84
H3F3B-206ENST00000587560 RPL37P61927 97 aaKnown RBP9.82□□□□□ -0.84
H3F3B-206ENST00000587560 Q8N9P0 234 aaPredicted RBP9.79□□□□□ -0.84
H3F3B-206ENST00000587560 TMEM254Q8TBM7 123 aa9.78□□□□□ -0.84
H3F3B-206ENST00000587560 hDV103S1A0JD37 113 aa9.76□□□□□ -0.85
H3F3B-206ENST00000587560 HCG22E2RYF7 251 aa9.74□□□□□ -0.85
H3F3B-206ENST00000587560 MRPL34Q9BQ48 92 aaKnown RBP9.74□□□□□ -0.85
H3F3B-206ENST00000587560 MUC17Q685J3 4493 aa9.73□□□□□ -0.85
H3F3B-206ENST00000587560 CASC2Q6XLA1 102 aa9.72□□□□□ -0.85
H3F3B-206ENST00000587560 SEC61BP60468 96 aaKnown RBP9.71□□□□□ -0.86
H3F3B-206ENST00000587560 WFDC13Q8IUB5 93 aa9.71□□□□□ -0.86
H3F3B-206ENST00000587560 MT-ATP8P03928 68 aa9.68□□□□□ -0.86
H3F3B-206ENST00000587560 PCOTHQ58A44 107 aa9.68□□□□□ -0.86
H3F3B-206ENST00000587560 HIST1H4AP62805 103 aaKnown RBP9.67□□□□□ -0.86
H3F3B-206ENST00000587560 A0A087WVE0 104 aa9.66□□□□□ -0.86
H3F3B-206ENST00000587560 IMUPQ9GZP8 106 aa9.65□□□□□ -0.86
H3F3B-206ENST00000587560 KRTAP4-1Q9BYQ7 146 aa9.64□□□□□ -0.87
H3F3B-206ENST00000587560 ATP11AUNQ6ZP68 121 aa9.63□□□□□ -0.87
H3F3B-206ENST00000587560 ZCCHC13Q8WW36 166 aaKnown RBP9.61□□□□□ -0.87
H3F3B-206ENST00000587560 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.58□□□□□ -0.88
H3F3B-206ENST00000587560 NDUFS5O43920 106 aa9.55□□□□□ -0.88
H3F3B-206ENST00000587560 Q5W150 140 aa9.55□□□□□ -0.88
H3F3B-206ENST00000587560 TP53AIP1Q9HCN2 124 aa9.53□□□□□ -0.88
H3F3B-206ENST00000587560 OCR1Q9BZK8 76 aa9.47□□□□□ -0.89
H3F3B-206ENST00000587560 UQCRQO14949 82 aa9.43□□□□□ -0.9
H3F3B-206ENST00000587560 FAM236AA0A1B0GUQ0 79 aa9.41□□□□□ -0.9
H3F3B-206ENST00000587560 FAM236BA0A1B0GV22 79 aa9.41□□□□□ -0.9
H3F3B-206ENST00000587560 SPINK7P58062 85 aa9.4□□□□□ -0.9
H3F3B-206ENST00000587560 KRTAP19-2Q3LHN2 52 aa9.39□□□□□ -0.91
H3F3B-206ENST00000587560 HRES1P13985 223 aa9.38□□□□□ -0.91
H3F3B-206ENST00000587560 TRAV22A0A0B4J277 110 aa9.37□□□□□ -0.91
H3F3B-206ENST00000587560 MPLKIPQ8TAP9 179 aa9.37□□□□□ -0.91
H3F3B-206ENST00000587560 IGKV2-30P06310 120 aa9.36□□□□□ -0.91
H3F3B-206ENST00000587560 SCGB1A1P11684 91 aa9.34□□□□□ -0.91
H3F3B-206ENST00000587560 C7orf65Q6ZTY9 151 aa9.32□□□□□ -0.92
H3F3B-206ENST00000587560 SMIM20Q8N5G0 67 aa9.31□□□□□ -0.92
H3F3B-206ENST00000587560 H0Y9P7 68 aa9.3□□□□□ -0.92
H3F3B-206ENST00000587560 LCE2CQ5TA81 110 aa9.3□□□□□ -0.92
H3F3B-206ENST00000587560 IGKV2D-30A0A075B6S6 120 aa9.29□□□□□ -0.92
H3F3B-206ENST00000587560 ATOX1O00244 68 aa9.29□□□□□ -0.92
H3F3B-206ENST00000587560 C5orf47Q569G3 176 aa9.29□□□□□ -0.92
H3F3B-206ENST00000587560 TRAV7A0A075B6U4 112 aa9.28□□□□□ -0.92
H3F3B-206ENST00000587560 CYP4F30PQ9H0H9 118 aa9.27□□□□□ -0.93
H3F3B-206ENST00000587560 LOC101927531A0A1B0GV80 90 aa9.26□□□□□ -0.93
H3F3B-206ENST00000587560 H3BPC8 53 aa9.23□□□□□ -0.93
H3F3B-206ENST00000587560 MP68P56378 58 aa9.21□□□□□ -0.94
H3F3B-206ENST00000587560 C1orf64Q8NEQ6 169 aa9.21□□□□□ -0.94
H3F3B-206ENST00000587560 LINC00208Q96KT6 92 aa9.2□□□□□ -0.94
H3F3B-206ENST00000587560 SERP2Q8N6R1 65 aa9.19□□□□□ -0.94
H3F3B-206ENST00000587560 RBM12B-AS1Q9P1G2 102 aa9.16□□□□□ -0.94
H3F3B-206ENST00000587560 KLKP1Q107X0 134 aa9.13□□□□□ -0.95
H3F3B-206ENST00000587560 C4orf26Q17RF5 130 aa9.11□□□□□ -0.95
H3F3B-206ENST00000587560 COX6B2Q6YFQ2 88 aa9.11□□□□□ -0.95
H3F3B-206ENST00000587560 KRTAP3-1Q9BYR8 98 aa9.1□□□□□ -0.95
H3F3B-206ENST00000587560 MT1HP80294 61 aa9.09□□□□□ -0.95
H3F3B-206ENST00000587560 COX7CP15954 63 aa9.07□□□□□ -0.96
H3F3B-206ENST00000587560 FAM236DA0A1B0GTK5 79 aa9.05□□□□□ -0.96
H3F3B-206ENST00000587560 FAM236CP0DP71 79 aa9.05□□□□□ -0.96
H3F3B-206ENST00000587560 FLGP20930 4061 aaPredicted RBP9.04□□□□□ -0.96
H3F3B-206ENST00000587560 C20orf197Q8N268 126 aa9.02□□□□□ -0.97
H3F3B-206ENST00000587560 SNURFQ9Y675 71 aa9.02□□□□□ -0.97
H3F3B-206ENST00000587560 H1FX-AS1Q4G0G2 97 aa9.01□□□□□ -0.97
H3F3B-206ENST00000587560 ANAPC13Q9BS18 74 aa9.01□□□□□ -0.97
H3F3B-206ENST00000587560 SSPOA2VEC9 5147 aa9.01□□□□□ -0.97
H3F3B-206ENST00000587560 FCGBPQ9Y6R7 5405 aaPredicted RBP8.93□□□□□ -0.98
H3F3B-206ENST00000587560 USH2AO75445 5202 aa8.92□□□□□ -0.98
H3F3B-206ENST00000587560 A8MUN3 132 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms