RNA–Protein interactions for RNA: ENST00000586792.5

ZNF540-204, Transcript of zinc finger protein 540, humanhuman

TSL 3 BASIC

Gene ZNF540, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-204ENST00000586792 COX6A2Q02221 97 aa2.93□□□□□ -1.94
ZNF540-204ENST00000586792 SPAG11BQ08648 103 aa2.93□□□□□ -1.94
ZNF540-204ENST00000586792 SYCNQ0VAF6 134 aa2.93□□□□□ -1.94
ZNF540-204ENST00000586792 CIRBPQ14011 172 aaKnown RBP2.93□□□□□ -1.94
ZNF540-204ENST00000586792 TMEM141Q96I45 108 aa2.93□□□□□ -1.94
ZNF540-204ENST00000586792 CYP4F30PQ9H0H9 118 aa2.93□□□□□ -1.94
ZNF540-204ENST00000586792 DNAH8Q96JB1 4490 aa2.92□□□□□ -1.94
ZNF540-204ENST00000586792 IGLV4-69A0A075B6H9 119 aa2.92□□□□□ -1.94
ZNF540-204ENST00000586792 TEX49A0A1B0GTD5 131 aa2.92□□□□□ -1.94
ZNF540-204ENST00000586792 A8MWP4 228 aa2.92□□□□□ -1.94
ZNF540-204ENST00000586792 RBM3P98179 157 aaKnown RBP2.92□□□□□ -1.94
ZNF540-204ENST00000586792 SMCR5Q8TEV8 140 aa2.92□□□□□ -1.94
ZNF540-204ENST00000586792 RYR1P21817 5038 aa2.91□□□□□ -1.94
ZNF540-204ENST00000586792 NDUFA1O15239 70 aa2.91□□□□□ -1.94
ZNF540-204ENST00000586792 DNAL4O96015 105 aa2.91□□□□□ -1.94
ZNF540-204ENST00000586792 MIR7-3HGQ8N6C7 128 aa2.91□□□□□ -1.94
ZNF540-204ENST00000586792 SPACA4Q8TDM5 124 aa2.91□□□□□ -1.94
ZNF540-204ENST00000586792 A0A096LNI7 61 aa2.9□□□□□ -1.95
ZNF540-204ENST00000586792 TOMM7Q9P0U1 55 aa2.9□□□□□ -1.95
ZNF540-204ENST00000586792 FAT1Q14517 4588 aa2.89□□□□□ -1.95
ZNF540-204ENST00000586792 H3BQ85 93 aa2.89□□□□□ -1.95
ZNF540-204ENST00000586792 PANO1I0J062 215 aa2.89□□□□□ -1.95
ZNF540-204ENST00000586792 LIMD2Q9BT23 127 aa2.89□□□□□ -1.95
ZNF540-204ENST00000586792 PLAC8Q9NZF1 115 aa2.89□□□□□ -1.95
ZNF540-204ENST00000586792 A0A096LNJ9 63 aa2.88□□□□□ -1.95
ZNF540-204ENST00000586792 IGIPA6NJ69 53 aa2.88□□□□□ -1.95
ZNF540-204ENST00000586792 ZNF815PA8K554 130 aa2.88□□□□□ -1.95
ZNF540-204ENST00000586792 ADM2Q7Z4H4 148 aa2.88□□□□□ -1.95
ZNF540-204ENST00000586792 CLEC2BQ92478 149 aa2.88□□□□□ -1.95
ZNF540-204ENST00000586792 AMELXQ99217 191 aa2.88□□□□□ -1.95
ZNF540-204ENST00000586792 PCLOQ9Y6V0 5065 aa2.88□□□□□ -1.95
ZNF540-204ENST00000586792 IGKV2D-26A0A0A0MRZ7 120 aa2.87□□□□□ -1.95
ZNF540-204ENST00000586792 RPL28P46779 137 aaKnown RBP2.87□□□□□ -1.95
ZNF540-204ENST00000586792 C9orf116Q5BN46 136 aaPredicted RBP2.87□□□□□ -1.95
ZNF540-204ENST00000586792 Q8IZM0 81 aa2.87□□□□□ -1.95
ZNF540-204ENST00000586792 C20orf197Q8N268 126 aa2.87□□□□□ -1.95
ZNF540-204ENST00000586792 CDKN2A-AS1Q9UH64 79 aa2.87□□□□□ -1.95
ZNF540-204ENST00000586792 C11orf86A6NJI1 115 aa2.86□□□□□ -1.95
ZNF540-204ENST00000586792 JMJD7-PLA2G4BH0Y9G9 81 aa2.86□□□□□ -1.95
ZNF540-204ENST00000586792 PDE6GP18545 87 aa2.86□□□□□ -1.95
ZNF540-204ENST00000586792 UNQ6190/PRO20217Q6UXQ8 127 aa2.86□□□□□ -1.95
ZNF540-204ENST00000586792 COX7B2Q8TF08 81 aa2.86□□□□□ -1.95
ZNF540-204ENST00000586792 RETNLBQ9BQ08 111 aa2.86□□□□□ -1.95
ZNF540-204ENST00000586792 C6orf48Q9UBA6 75 aa2.86□□□□□ -1.95
ZNF540-204ENST00000586792 ABCA13Q86UQ4 5058 aa2.86□□□□□ -1.95
ZNF540-204ENST00000586792 H3BPC8 53 aa2.85□□□□□ -1.95
ZNF540-204ENST00000586792 NDUFB1O75438 58 aa2.85□□□□□ -1.95
ZNF540-204ENST00000586792 ZNF22P17026 224 aaPredicted RBP2.85□□□□□ -1.95
ZNF540-204ENST00000586792 C9orf129Q5T035 196 aaKnown RBP2.85□□□□□ -1.95
ZNF540-204ENST00000586792 SFTA2Q6UW10 78 aa2.85□□□□□ -1.95
ZNF540-204ENST00000586792 OBSCN-AS1Q96MR7 158 aa2.85□□□□□ -1.95
ZNF540-204ENST00000586792 A0A1W2PNN7 141 aa2.84□□□□□ -1.95
ZNF540-204ENST00000586792 hDV103S1A0JD37 113 aa2.84□□□□□ -1.95
ZNF540-204ENST00000586792 KRTAP1-4P0C5Y4 121 aa2.84□□□□□ -1.95
ZNF540-204ENST00000586792 KRTAP10-4P60372 401 aaPredicted RBP2.84□□□□□ -1.95
ZNF540-204ENST00000586792 C1orf137Q5JT78 98 aa2.84□□□□□ -1.95
ZNF540-204ENST00000586792 SPINK6Q6UWN8 80 aa2.84□□□□□ -1.95
ZNF540-204ENST00000586792 SPANXA2-OT1Q8N9U9 137 aa2.84□□□□□ -1.95
ZNF540-204ENST00000586792 UBL5Q9BZL1 73 aa2.84□□□□□ -1.95
ZNF540-204ENST00000586792 FAM168BA1KXE4 195 aa2.83□□□□□ -1.96
ZNF540-204ENST00000586792 F8WEM9 126 aa2.83□□□□□ -1.96
ZNF540-204ENST00000586792 H0YGX0 51 aa2.83□□□□□ -1.96
ZNF540-204ENST00000586792 IGLV7-43P04211 117 aa2.83□□□□□ -1.96
ZNF540-204ENST00000586792 ELOF1P60002 83 aaKnown RBP2.83□□□□□ -1.96
ZNF540-204ENST00000586792 PSORS1C2Q9UIG4 136 aa2.83□□□□□ -1.96
ZNF540-204ENST00000586792 A6NN06 94 aa2.82□□□□□ -1.96
ZNF540-204ENST00000586792 H7C2G1 150 aa2.82□□□□□ -1.96
ZNF540-204ENST00000586792 TYMSOSQ8TAI1 123 aa2.82□□□□□ -1.96
ZNF540-204ENST00000586792 CYSTM1Q9H1C7 97 aa2.82□□□□□ -1.96
ZNF540-204ENST00000586792 CDC42SE1Q9NRR8 79 aa2.82□□□□□ -1.96
ZNF540-204ENST00000586792 VPS13BQ7Z7G8 4022 aa2.81□□□□□ -1.96
ZNF540-204ENST00000586792 TRBV7-4A0A0J9YYF1 115 aa2.81□□□□□ -1.96
ZNF540-204ENST00000586792 A8MUU9 505 aa2.81□□□□□ -1.96
ZNF540-204ENST00000586792 COX17Q14061 63 aa2.81□□□□□ -1.96
ZNF540-204ENST00000586792 DEFB116Q30KQ4 102 aa2.81□□□□□ -1.96
ZNF540-204ENST00000586792 Q8NDZ9 215 aa2.81□□□□□ -1.96
ZNF540-204ENST00000586792 C1orf64Q8NEQ6 169 aa2.81□□□□□ -1.96
ZNF540-204ENST00000586792 ZNF625Q96I27 306 aaPredicted RBP2.81□□□□□ -1.96
ZNF540-204ENST00000586792 C14orf132Q9NPU4 83 aa2.81□□□□□ -1.96
ZNF540-204ENST00000586792 C22orf24Q9Y442 160 aa2.81□□□□□ -1.96
ZNF540-204ENST00000586792 BAALC-AS2P0C853 105 aa2.8□□□□□ -1.96
ZNF540-204ENST00000586792 LINC00158P58513 81 aa2.8□□□□□ -1.96
ZNF540-204ENST00000586792 FAM229BQ4G0N7 80 aa2.8□□□□□ -1.96
ZNF540-204ENST00000586792 TMEM254Q8TBM7 123 aa2.8□□□□□ -1.96
ZNF540-204ENST00000586792 PKHD1L1Q86WI1 4243 aa2.79□□□□□ -1.96
ZNF540-204ENST00000586792 TRAV23DV6A0A075B6W5 121 aa2.79□□□□□ -1.96
ZNF540-204ENST00000586792 CASC2Q6XLA1 102 aa2.79□□□□□ -1.96
ZNF540-204ENST00000586792 Q6ZQT0 140 aa2.79□□□□□ -1.96
ZNF540-204ENST00000586792 MYCBP2O75592 4640 aa2.79□□□□□ -1.96
ZNF540-204ENST00000586792 IGKV2-28A0A075B6P5 120 aa2.78□□□□□ -1.96
ZNF540-204ENST00000586792 TRAV22A0A0B4J277 110 aa2.78□□□□□ -1.96
ZNF540-204ENST00000586792 LOC101927531A0A1B0GV80 90 aa2.78□□□□□ -1.96
ZNF540-204ENST00000586792 ZNF861PO60384 105 aa2.78□□□□□ -1.96
ZNF540-204ENST00000586792 IGKV2D-28P01615 120 aa2.78□□□□□ -1.96
ZNF540-204ENST00000586792 MUSTN1Q8IVN3 82 aa2.78□□□□□ -1.96
ZNF540-204ENST00000586792 LINC00167Q96N53 147 aa2.78□□□□□ -1.96
ZNF540-204ENST00000586792 NDUFA12Q9UI09 145 aa2.78□□□□□ -1.96
ZNF540-204ENST00000586792 SRRM2Q9UQ35 2752 aaKnown RBP2.78□□□□□ -1.96
ZNF540-204ENST00000586792 DMBT1Q9UGM3 2413 aaPredicted RBP2.78□□□□□ -1.97
ZNF540-204ENST00000586792 FAT3Q8TDW7 4589 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms