RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 HIGD2AQ9BW72 106 aa2.27□□□□□ -2.05
SMCHD1-208ENST00000583344 ZNF469Q96JG9 3925 aaPredicted RBP2.27□□□□□ -2.05
SMCHD1-208ENST00000583344 FAM229BQ4G0N7 80 aa2.26□□□□□ -2.05
SMCHD1-208ENST00000583344 C1orf137Q5JT78 98 aa2.26□□□□□ -2.05
SMCHD1-208ENST00000583344 WFDC10BQ8IUB3 73 aa2.26□□□□□ -2.05
SMCHD1-208ENST00000583344 Q9BRP9 147 aa2.26□□□□□ -2.05
SMCHD1-208ENST00000583344 H3BPC8 53 aa2.25□□□□□ -2.05
SMCHD1-208ENST00000583344 NDUFB1O75438 58 aa2.25□□□□□ -2.05
SMCHD1-208ENST00000583344 HTN3P15516 51 aa2.25□□□□□ -2.05
SMCHD1-208ENST00000583344 PKIGQ9Y2B9 76 aa2.25□□□□□ -2.05
SMCHD1-208ENST00000583344 HIVEP2P31629 2446 aa2.25□□□□□ -2.05
SMCHD1-208ENST00000583344 ZANQ9Y493 2812 aa2.24□□□□□ -2.05
SMCHD1-208ENST00000583344 C3orf84H3BNL1 204 aa2.24□□□□□ -2.05
SMCHD1-208ENST00000583344 PRR15Q8IV56 129 aa2.24□□□□□ -2.05
SMCHD1-208ENST00000583344 SPANXA2-OT1Q8N9U9 137 aa2.24□□□□□ -2.05
SMCHD1-208ENST00000583344 C1orf64Q8NEQ6 169 aa2.24□□□□□ -2.05
SMCHD1-208ENST00000583344 DEFB105AQ8NG35 78 aa2.24□□□□□ -2.05
SMCHD1-208ENST00000583344 LINC00588Q9Y4M8 146 aa2.24□□□□□ -2.05
SMCHD1-208ENST00000583344 ANK2Q01484 3957 aa2.24□□□□□ -2.05
SMCHD1-208ENST00000583344 TGP01266 2768 aa2.24□□□□□ -2.05
SMCHD1-208ENST00000583344 CUBNO60494 3623 aa2.23□□□□□ -2.05
SMCHD1-208ENST00000583344 IGKV2D-24A0A075B6R9 120 aa2.23□□□□□ -2.05
SMCHD1-208ENST00000583344 HCG22E2RYF7 251 aa2.23□□□□□ -2.05
SMCHD1-208ENST00000583344 SPRR1BP22528 89 aa2.23□□□□□ -2.05
SMCHD1-208ENST00000583344 LINC00313P59037 77 aa2.23□□□□□ -2.05
SMCHD1-208ENST00000583344 BRK1Q8WUW1 75 aa2.23□□□□□ -2.05
SMCHD1-208ENST00000583344 DEFB131BA0A096LNP1 70 aa2.22□□□□□ -2.05
SMCHD1-208ENST00000583344 K7EQZ3 153 aa2.22□□□□□ -2.05
SMCHD1-208ENST00000583344 PSCAO43653 123 aa2.22□□□□□ -2.05
SMCHD1-208ENST00000583344 Q5W150 140 aa2.22□□□□□ -2.05
SMCHD1-208ENST00000583344 IGFL1Q6UW32 110 aa2.22□□□□□ -2.05
SMCHD1-208ENST00000583344 ST20-AS1Q8NBB2 130 aa2.22□□□□□ -2.05
SMCHD1-208ENST00000583344 TRAV22A0A0B4J277 110 aa2.21□□□□□ -2.06
SMCHD1-208ENST00000583344 A6NED7 52 aa2.21□□□□□ -2.06
SMCHD1-208ENST00000583344 RYR3Q15413 4870 aa2.21□□□□□ -2.06
SMCHD1-208ENST00000583344 B9D2Q9BPU9 175 aa2.21□□□□□ -2.06
SMCHD1-208ENST00000583344 LINC00472Q9H8W2 130 aa2.21□□□□□ -2.06
SMCHD1-208ENST00000583344 TLN2Q9Y4G6 2542 aa2.21□□□□□ -2.06
SMCHD1-208ENST00000583344 NBEAL2Q6ZNJ1 2754 aa2.21□□□□□ -2.06
SMCHD1-208ENST00000583344 SONP18583 2426 aaKnown RBP2.2□□□□□ -2.06
SMCHD1-208ENST00000583344 UBE2BP63146 152 aa2.2□□□□□ -2.06
SMCHD1-208ENST00000583344 C9orf163Q8N9P6 203 aa2.2□□□□□ -2.06
SMCHD1-208ENST00000583344 LIMD2Q9BT23 127 aa2.2□□□□□ -2.06
SMCHD1-208ENST00000583344 PKD1L1Q8TDX9 2849 aa2.2□□□□□ -2.06
SMCHD1-208ENST00000583344 LOC101927531A0A1B0GV80 90 aa2.19□□□□□ -2.06
SMCHD1-208ENST00000583344 A8MWP4 228 aa2.19□□□□□ -2.06
SMCHD1-208ENST00000583344 C16orf90A8MZG2 172 aa2.19□□□□□ -2.06
SMCHD1-208ENST00000583344 CNBPP62633 177 aaKnown RBP2.19□□□□□ -2.06
SMCHD1-208ENST00000583344 ASB16-AS1Q495Z4 193 aa2.19□□□□□ -2.06
SMCHD1-208ENST00000583344 LINC00208Q96KT6 92 aa2.19□□□□□ -2.06
SMCHD1-208ENST00000583344 WNK1Q9H4A3 2382 aa2.18□□□□□ -2.06
SMCHD1-208ENST00000583344 BIRC6Q9NR09 4857 aa2.18□□□□□ -2.06
SMCHD1-208ENST00000583344 A0A087WSZ3 146 aa2.18□□□□□ -2.06
SMCHD1-208ENST00000583344 A0A1W2PNN7 141 aa2.18□□□□□ -2.06
SMCHD1-208ENST00000583344 LRCOL1A6NCL2 159 aa2.18□□□□□ -2.06
SMCHD1-208ENST00000583344 IGLV7-43P04211 117 aa2.18□□□□□ -2.06
SMCHD1-208ENST00000583344 RPL37AP61513 92 aaKnown RBP2.18□□□□□ -2.06
SMCHD1-208ENST00000583344 KRTAP21-2Q3LI59 83 aa2.18□□□□□ -2.06
SMCHD1-208ENST00000583344 Q5VV11 94 aa2.18□□□□□ -2.06
SMCHD1-208ENST00000583344 CASC2Q6XLA1 102 aa2.18□□□□□ -2.06
SMCHD1-208ENST00000583344 DNAH1Q9P2D7 4330 aa2.18□□□□□ -2.06
SMCHD1-208ENST00000583344 TENM1Q9UKZ4 2725 aa2.17□□□□□ -2.06
SMCHD1-208ENST00000583344 A8MUN3 132 aa2.17□□□□□ -2.06
SMCHD1-208ENST00000583344 H0Y9P7 68 aa2.17□□□□□ -2.06
SMCHD1-208ENST00000583344 WFDC13Q8IUB5 93 aa2.17□□□□□ -2.06
SMCHD1-208ENST00000583344 TP53AIP1Q9HCN2 124 aa2.17□□□□□ -2.06
SMCHD1-208ENST00000583344 NOTCH1P46531 2555 aa2.17□□□□□ -2.06
SMCHD1-208ENST00000583344 KMT2CQ8NEZ4 4911 aaKnown RBP2.16□□□□□ -2.06
SMCHD1-208ENST00000583344 A0A096LNI7 61 aa2.16□□□□□ -2.06
SMCHD1-208ENST00000583344 LINC00483Q53H64 154 aa2.16□□□□□ -2.06
SMCHD1-208ENST00000583344 ATP11AUNQ6ZP68 121 aa2.16□□□□□ -2.06
SMCHD1-208ENST00000583344 ADM2Q7Z4H4 148 aa2.16□□□□□ -2.06
SMCHD1-208ENST00000583344 PLAC8Q9NZF1 115 aa2.16□□□□□ -2.06
SMCHD1-208ENST00000583344 LINC01558Q9Y6Z2 57 aa2.16□□□□□ -2.06
SMCHD1-208ENST00000583344 MGAM2Q2M2H8 2515 aa2.16□□□□□ -2.06
SMCHD1-208ENST00000583344 A0A0G2JQZ4 141 aa2.15□□□□□ -2.07
SMCHD1-208ENST00000583344 MMP24-AS1A0A0U1RRL7 71 aa2.15□□□□□ -2.07
SMCHD1-208ENST00000583344 PHF5AQ7RTV0 110 aaKnown RBP2.15□□□□□ -2.07
SMCHD1-208ENST00000583344 KRTAP13-1Q8IUC0 172 aa2.15□□□□□ -2.07
SMCHD1-208ENST00000583344 EPPK1P58107 5090 aaKnown RBP2.15□□□□□ -2.07
SMCHD1-208ENST00000583344 A8MUU9 505 aa2.14□□□□□ -2.07
SMCHD1-208ENST00000583344 PRLHP81277 87 aa2.14□□□□□ -2.07
SMCHD1-208ENST00000583344 Q96NJ1 140 aa2.14□□□□□ -2.07
SMCHD1-208ENST00000583344 VWFP04275 2813 aa2.13□□□□□ -2.07
SMCHD1-208ENST00000583344 CHKB-CPT1BH3BT56 60 aa2.13□□□□□ -2.07
SMCHD1-208ENST00000583344 MOBPQ13875 183 aa2.13□□□□□ -2.07
SMCHD1-208ENST00000583344 LCA10Q71F78 164 aa2.13□□□□□ -2.07
SMCHD1-208ENST00000583344 COA5Q86WW8 74 aa2.13□□□□□ -2.07
SMCHD1-208ENST00000583344 CDC42SE1Q9NRR8 79 aa2.13□□□□□ -2.07
SMCHD1-208ENST00000583344 IGKV2-24A0A0C4DH68 120 aa2.12□□□□□ -2.07
SMCHD1-208ENST00000583344 A6NN06 94 aa2.12□□□□□ -2.07
SMCHD1-208ENST00000583344 PRR15LQ9BU68 103 aa2.12□□□□□ -2.07
SMCHD1-208ENST00000583344 APLNQ9ULZ1 77 aa2.12□□□□□ -2.07
SMCHD1-208ENST00000583344 TRRAPQ9Y4A5 3859 aa2.12□□□□□ -2.07
SMCHD1-208ENST00000583344 HRES1P13985 223 aa2.11□□□□□ -2.07
SMCHD1-208ENST00000583344 SPINT4Q6UDR6 99 aa2.11□□□□□ -2.07
SMCHD1-208ENST00000583344 KTN1-AS1Q86SY8 53 aa2.11□□□□□ -2.07
SMCHD1-208ENST00000583344 MRPL34Q9BQ48 92 aaKnown RBP2.11□□□□□ -2.07
SMCHD1-208ENST00000583344 HYDINQ4G0P3 5121 aa2.1□□□□□ -2.07
SMCHD1-208ENST00000583344 K7EIL1 84 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms