RNA–Protein interactions for RNA: ENST00000582331.2

CCDC47-205, Transcript of coiled-coil domain containing 47, humanhuman

TSL 3

Gene CCDC47, Length 693 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-205ENST00000582331 Q6Q795 121 aa4.19□□□□□ -1.74
CCDC47-205ENST00000582331 ZNF706Q9Y5V0 76 aaPredicted RBP4.19□□□□□ -1.74
CCDC47-205ENST00000582331 IGLV8-61A0A075B6I0 122 aa4.18□□□□□ -1.74
CCDC47-205ENST00000582331 LOC110117498A0A087WWA1 95 aa4.18□□□□□ -1.74
CCDC47-205ENST00000582331 LINC00643Q86TS7 51 aa4.18□□□□□ -1.74
CCDC47-205ENST00000582331 Q8N377 158 aa4.18□□□□□ -1.74
CCDC47-205ENST00000582331 TRBV7-7A0A0K0K1E9 115 aa4.17□□□□□ -1.74
CCDC47-205ENST00000582331 A0A1B0GV72 72 aa4.17□□□□□ -1.74
CCDC47-205ENST00000582331 RPS29P62273 56 aaKnown RBP4.17□□□□□ -1.74
CCDC47-205ENST00000582331 RBM3P98179 157 aaKnown RBP4.17□□□□□ -1.74
CCDC47-205ENST00000582331 PCOTHQ58A44 107 aa4.17□□□□□ -1.74
CCDC47-205ENST00000582331 Q6ZQT0 140 aa4.17□□□□□ -1.74
CCDC47-205ENST00000582331 Q6ZRX8 168 aa4.17□□□□□ -1.74
CCDC47-205ENST00000582331 LINC00846Q9NV44 126 aa4.17□□□□□ -1.74
CCDC47-205ENST00000582331 NDUFV3P56181 108 aaKnown RBP4.16□□□□□ -1.74
CCDC47-205ENST00000582331 Q9BRP9 147 aa4.16□□□□□ -1.74
CCDC47-205ENST00000582331 DHRS4-AS1Q9P1J3 65 aa4.16□□□□□ -1.74
CCDC47-205ENST00000582331 LAMTOR3Q9UHA4 124 aa4.16□□□□□ -1.74
CCDC47-205ENST00000582331 TRBV7-4A0A0J9YYF1 115 aa4.15□□□□□ -1.75
CCDC47-205ENST00000582331 ETDCA0A1B0GVM5 59 aa4.14□□□□□ -1.75
CCDC47-205ENST00000582331 ERC2-IT1O76042 136 aa4.14□□□□□ -1.75
CCDC47-205ENST00000582331 PDE6GP18545 87 aa4.14□□□□□ -1.75
CCDC47-205ENST00000582331 Q6JHZ5 121 aa4.14□□□□□ -1.75
CCDC47-205ENST00000582331 SSBP3-AS1Q7Z2R9 100 aa4.14□□□□□ -1.75
CCDC47-205ENST00000582331 IMUPQ9GZP8 106 aa4.14□□□□□ -1.75
CCDC47-205ENST00000582331 IGLV5-48A0A075B6I7 105 aa4.13□□□□□ -1.75
CCDC47-205ENST00000582331 MOBPQ13875 183 aa4.13□□□□□ -1.75
CCDC47-205ENST00000582331 DSCR8Q96T75 97 aa4.13□□□□□ -1.75
CCDC47-205ENST00000582331 IGLV9-49A0A0B4J1Y8 123 aa4.12□□□□□ -1.75
CCDC47-205ENST00000582331 LINC00483Q53H64 154 aa4.12□□□□□ -1.75
CCDC47-205ENST00000582331 COX6B2Q6YFQ2 88 aa4.12□□□□□ -1.75
CCDC47-205ENST00000582331 ST20-AS1Q8NBB2 130 aa4.12□□□□□ -1.75
CCDC47-205ENST00000582331 FLGP20930 4061 aaPredicted RBP4.11□□□□□ -1.75
CCDC47-205ENST00000582331 IGKV3D-7A0A0C4DH55 119 aa4.11□□□□□ -1.75
CCDC47-205ENST00000582331 SMIM29Q86T20 159 aa4.11□□□□□ -1.75
CCDC47-205ENST00000582331 DEFB105AQ8NG35 78 aa4.11□□□□□ -1.75
CCDC47-205ENST00000582331 C9orf92A6NGG3 77 aa4.09□□□□□ -1.75
CCDC47-205ENST00000582331 ATP5EP2Q5VTU8 51 aa4.09□□□□□ -1.75
CCDC47-205ENST00000582331 UBL5Q9BZL1 73 aa4.09□□□□□ -1.75
CCDC47-205ENST00000582331 SSPOA2VEC9 5147 aa4.08□□□□□ -1.76
CCDC47-205ENST00000582331 HIST1H4AP62805 103 aaKnown RBP4.08□□□□□ -1.76
CCDC47-205ENST00000582331 Q6ZVQ6 151 aa4.08□□□□□ -1.76
CCDC47-205ENST00000582331 ANAPC13Q9BS18 74 aa4.08□□□□□ -1.76
CCDC47-205ENST00000582331 USH2AO75445 5202 aa4.07□□□□□ -1.76
CCDC47-205ENST00000582331 FAM236AA0A1B0GUQ0 79 aa4.07□□□□□ -1.76
CCDC47-205ENST00000582331 FAM236BA0A1B0GV22 79 aa4.07□□□□□ -1.76
CCDC47-205ENST00000582331 A0A1W2PNM2 257 aa4.07□□□□□ -1.76
CCDC47-205ENST00000582331 SPRR1BP22528 89 aa4.07□□□□□ -1.76
CCDC47-205ENST00000582331 C9orf153Q5TBE3 101 aa4.06□□□□□ -1.76
CCDC47-205ENST00000582331 A0A087WVE0 104 aa4.05□□□□□ -1.76
CCDC47-205ENST00000582331 A0A1B0GW54 56 aa4.05□□□□□ -1.76
CCDC47-205ENST00000582331 FCGBPQ9Y6R7 5405 aaPredicted RBP4.05□□□□□ -1.76
CCDC47-205ENST00000582331 CXCL6P80162 114 aa4.04□□□□□ -1.76
CCDC47-205ENST00000582331 LIMD2Q9BT23 127 aa4.04□□□□□ -1.76
CCDC47-205ENST00000582331 CCDC179H3BU77 68 aa4.03□□□□□ -1.76
CCDC47-205ENST00000582331 A0A0G2JQZ4 141 aa4.02□□□□□ -1.77
CCDC47-205ENST00000582331 F8WEM9 126 aa4.02□□□□□ -1.77
CCDC47-205ENST00000582331 ATOX1O00244 68 aa4.02□□□□□ -1.77
CCDC47-205ENST00000582331 RPL37P61927 97 aaKnown RBP4.02□□□□□ -1.77
CCDC47-205ENST00000582331 NREPQ16612 68 aa4.02□□□□□ -1.77
CCDC47-205ENST00000582331 IGFL1Q6UW32 110 aa4.02□□□□□ -1.77
CCDC47-205ENST00000582331 HRCT1Q6UXD1 115 aa4.01□□□□□ -1.77
CCDC47-205ENST00000582331 IGKV4-1P06312 121 aa3.99□□□□□ -1.77
CCDC47-205ENST00000582331 COX7CP15954 63 aa3.99□□□□□ -1.77
CCDC47-205ENST00000582331 BPY2O14599 106 aa3.98□□□□□ -1.77
CCDC47-205ENST00000582331 UQCRQO14949 82 aa3.98□□□□□ -1.77
CCDC47-205ENST00000582331 SERP2Q8N6R1 65 aa3.98□□□□□ -1.77
CCDC47-205ENST00000582331 SYNE2Q8WXH0 6885 aaKnown RBP3.97□□□□□ -1.77
CCDC47-205ENST00000582331 DSCR10P59022 87 aa3.97□□□□□ -1.77
CCDC47-205ENST00000582331 Q8N9L7 120 aa3.97□□□□□ -1.77
CCDC47-205ENST00000582331 A0A087WSZ3 146 aa3.96□□□□□ -1.78
CCDC47-205ENST00000582331 CD164Q04900 197 aa3.95□□□□□ -1.78
CCDC47-205ENST00000582331 MACF1Q9UPN3 7388 aaKnown RBP3.95□□□□□ -1.78
CCDC47-205ENST00000582331 TRAV7A0A075B6U4 112 aa3.94□□□□□ -1.78
CCDC47-205ENST00000582331 C1orf195Q5TG92 126 aa3.94□□□□□ -1.78
CCDC47-205ENST00000582331 Q8N9P0 234 aaPredicted RBP3.94□□□□□ -1.78
CCDC47-205ENST00000582331 Q5XG85 94 aa3.93□□□□□ -1.78
CCDC47-205ENST00000582331 SMIM20Q8N5G0 67 aa3.93□□□□□ -1.78
CCDC47-205ENST00000582331 SVIPQ8NHG7 77 aa3.93□□□□□ -1.78
CCDC47-205ENST00000582331 LINC00472Q9H8W2 130 aa3.93□□□□□ -1.78
CCDC47-205ENST00000582331 K7EQZ3 153 aa3.92□□□□□ -1.78
CCDC47-205ENST00000582331 CYSTM1Q9H1C7 97 aa3.92□□□□□ -1.78
CCDC47-205ENST00000582331 MT2AP02795 61 aa3.91□□□□□ -1.78
CCDC47-205ENST00000582331 DEFB116Q30KQ4 102 aa3.91□□□□□ -1.78
CCDC47-205ENST00000582331 ATP11AUNQ6ZP68 121 aa3.91□□□□□ -1.78
CCDC47-205ENST00000582331 OCR1Q9BZK8 76 aa3.91□□□□□ -1.78
CCDC47-205ENST00000582331 LCE1AQ5T7P2 110 aa3.9□□□□□ -1.79
CCDC47-205ENST00000582331 Q96NJ1 140 aa3.9□□□□□ -1.79
CCDC47-205ENST00000582331 PRR15Q8IV56 129 aa3.89□□□□□ -1.79
CCDC47-205ENST00000582331 SS18L2Q9UHA2 77 aa3.89□□□□□ -1.79
CCDC47-205ENST00000582331 A8MWP4 228 aa3.88□□□□□ -1.79
CCDC47-205ENST00000582331 HCG22E2RYF7 251 aa3.88□□□□□ -1.79
CCDC47-205ENST00000582331 J3KT08 172 aa3.88□□□□□ -1.79
CCDC47-205ENST00000582331 KRTAP6-3Q3LI67 103 aa3.88□□□□□ -1.79
CCDC47-205ENST00000582331 C20orf197Q8N268 126 aa3.88□□□□□ -1.79
CCDC47-205ENST00000582331 MT1FP04733 61 aa3.87□□□□□ -1.79
CCDC47-205ENST00000582331 KRTAP10-10P60014 251 aa3.87□□□□□ -1.79
CCDC47-205ENST00000582331 KLKP1Q107X0 134 aa3.87□□□□□ -1.79
CCDC47-205ENST00000582331 Q75L30 129 aa3.87□□□□□ -1.79
CCDC47-205ENST00000582331 KRTAP19-6Q3LI70 58 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms