RNA–Protein interactions for RNA: ENST00000582242.1

CDH8-207, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-207ENST00000582242 KRTAP13-1Q8IUC0 172 aa4.86□□□□□ -1.63
CDH8-207ENST00000582242 SPACA4Q8TDM5 124 aa4.86□□□□□ -1.63
CDH8-207ENST00000582242 ZCCHC13Q8WW36 166 aaKnown RBP4.86□□□□□ -1.63
CDH8-207ENST00000582242 PRR15Q8IV56 129 aa4.85□□□□□ -1.63
CDH8-207ENST00000582242 STAB1Q9NY15 2570 aa4.84□□□□□ -1.63
CDH8-207ENST00000582242 CASC2Q6XLA1 102 aa4.84□□□□□ -1.63
CDH8-207ENST00000582242 FBN1P35555 2871 aaKnown RBP4.84□□□□□ -1.63
CDH8-207ENST00000582242 ANK2Q01484 3957 aa4.83□□□□□ -1.64
CDH8-207ENST00000582242 hDV103S1A0JD37 113 aa4.83□□□□□ -1.64
CDH8-207ENST00000582242 C4orf26Q17RF5 130 aa4.83□□□□□ -1.64
CDH8-207ENST00000582242 LINC00483Q53H64 154 aa4.83□□□□□ -1.64
CDH8-207ENST00000582242 HRCT1Q6UXD1 115 aa4.83□□□□□ -1.64
CDH8-207ENST00000582242 WFDC13Q8IUB5 93 aa4.83□□□□□ -1.64
CDH8-207ENST00000582242 LINC00472Q9H8W2 130 aa4.83□□□□□ -1.64
CDH8-207ENST00000582242 PKD1L1Q8TDX9 2849 aa4.82□□□□□ -1.64
CDH8-207ENST00000582242 A0A087WTM6 91 aa4.82□□□□□ -1.64
CDH8-207ENST00000582242 CYP4F30PQ9H0H9 118 aa4.82□□□□□ -1.64
CDH8-207ENST00000582242 FLNBO75369 2602 aaKnown RBP4.82□□□□□ -1.64
CDH8-207ENST00000582242 DNAH1Q9P2D7 4330 aa4.82□□□□□ -1.64
CDH8-207ENST00000582242 A0A0G2JQZ4 141 aa4.81□□□□□ -1.64
CDH8-207ENST00000582242 A0A1B0GVX0 72 aa4.81□□□□□ -1.64
CDH8-207ENST00000582242 MOBPQ13875 183 aa4.81□□□□□ -1.64
CDH8-207ENST00000582242 TRAV22A0A0B4J277 110 aa4.8□□□□□ -1.64
CDH8-207ENST00000582242 H0Y9P7 68 aa4.8□□□□□ -1.64
CDH8-207ENST00000582242 RTL8CO15255 209 aa4.8□□□□□ -1.64
CDH8-207ENST00000582242 DEFB116Q30KQ4 102 aa4.8□□□□□ -1.64
CDH8-207ENST00000582242 LCE3EQ5T5B0 92 aa4.8□□□□□ -1.64
CDH8-207ENST00000582242 FP248Q71RG6 208 aaPredicted RBP4.8□□□□□ -1.64
CDH8-207ENST00000582242 SPANXA2-OT1Q8N9U9 137 aa4.8□□□□□ -1.64
CDH8-207ENST00000582242 PLAC8Q9NZF1 115 aa4.8□□□□□ -1.64
CDH8-207ENST00000582242 HUWE1Q7Z6Z7 4374 aaKnown RBP4.8□□□□□ -1.64
CDH8-207ENST00000582242 TP53AIP1Q9HCN2 124 aa4.79□□□□□ -1.64
CDH8-207ENST00000582242 MMP24-AS1A0A0U1RRL7 71 aa4.77□□□□□ -1.65
CDH8-207ENST00000582242 LINC00208Q96KT6 92 aa4.77□□□□□ -1.65
CDH8-207ENST00000582242 V9GYY9 64 aa4.77□□□□□ -1.65
CDH8-207ENST00000582242 C1orf64Q8NEQ6 169 aa4.76□□□□□ -1.65
CDH8-207ENST00000582242 PRO0628Q9UI54 55 aa4.76□□□□□ -1.65
CDH8-207ENST00000582242 PSORS1C2Q9UIG4 136 aa4.76□□□□□ -1.65
CDH8-207ENST00000582242 NOTCH1P46531 2555 aa4.76□□□□□ -1.65
CDH8-207ENST00000582242 C1orf134Q5TEV5 83 aa4.75□□□□□ -1.65
CDH8-207ENST00000582242 Q1T7F1 81 aa4.74□□□□□ -1.65
CDH8-207ENST00000582242 FAM229BQ4G0N7 80 aa4.74□□□□□ -1.65
CDH8-207ENST00000582242 C8orf17Q9NRJ1 99 aa4.74□□□□□ -1.65
CDH8-207ENST00000582242 NBEAL1Q6ZS30 2694 aa4.73□□□□□ -1.65
CDH8-207ENST00000582242 DYNC2H1Q8NCM8 4307 aaKnown RBP4.73□□□□□ -1.65
CDH8-207ENST00000582242 CD164Q04900 197 aa4.73□□□□□ -1.65
CDH8-207ENST00000582242 ASB16-AS1Q495Z4 193 aa4.73□□□□□ -1.65
CDH8-207ENST00000582242 Q96NJ1 140 aa4.73□□□□□ -1.65
CDH8-207ENST00000582242 COL6A5A8TX70 2615 aa4.73□□□□□ -1.65
CDH8-207ENST00000582242 IGLV7-43P04211 117 aa4.71□□□□□ -1.66
CDH8-207ENST00000582242 C1orf195Q5TG92 126 aa4.71□□□□□ -1.66
CDH8-207ENST00000582242 LINC00336Q6ZUF6 198 aa4.71□□□□□ -1.66
CDH8-207ENST00000582242 KRTAP12-2P59991 146 aa4.7□□□□□ -1.66
CDH8-207ENST00000582242 SSBP3-AS1Q7Z2R9 100 aa4.7□□□□□ -1.66
CDH8-207ENST00000582242 MRPL34Q9BQ48 92 aaKnown RBP4.7□□□□□ -1.66
CDH8-207ENST00000582242 IGHV6-1A0A0B4J1U7 121 aa4.69□□□□□ -1.66
CDH8-207ENST00000582242 C8orf87E5RJ46 101 aa4.69□□□□□ -1.66
CDH8-207ENST00000582242 NDUFS5O43920 106 aa4.68□□□□□ -1.66
CDH8-207ENST00000582242 BRK1Q8WUW1 75 aa4.68□□□□□ -1.66
CDH8-207ENST00000582242 STAB2Q8WWQ8 2551 aa4.67□□□□□ -1.66
CDH8-207ENST00000582242 MGAM2Q2M2H8 2515 aa4.67□□□□□ -1.66
CDH8-207ENST00000582242 Q5W150 140 aa4.67□□□□□ -1.66
CDH8-207ENST00000582242 DNAH9Q9NYC9 4486 aa4.67□□□□□ -1.66
CDH8-207ENST00000582242 LOC101927531A0A1B0GV80 90 aa4.66□□□□□ -1.66
CDH8-207ENST00000582242 LY6G6CO95867 125 aa4.66□□□□□ -1.66
CDH8-207ENST00000582242 LIMD2Q9BT23 127 aa4.66□□□□□ -1.66
CDH8-207ENST00000582242 CIRBP-AS1Q8TBR5 109 aa4.64□□□□□ -1.67
CDH8-207ENST00000582242 COL7A1Q02388 2944 aa4.64□□□□□ -1.67
CDH8-207ENST00000582242 COA5Q86WW8 74 aa4.63□□□□□ -1.67
CDH8-207ENST00000582242 OBSCNQ5VST9 7968 aa4.62□□□□□ -1.67
CDH8-207ENST00000582242 DNAH10Q8IVF4 4471 aa4.62□□□□□ -1.67
CDH8-207ENST00000582242 PCOTHQ58A44 107 aa4.61□□□□□ -1.67
CDH8-207ENST00000582242 SPINK6Q6UWN8 80 aa4.61□□□□□ -1.67
CDH8-207ENST00000582242 Q6ZSA8 131 aa4.61□□□□□ -1.67
CDH8-207ENST00000582242 PSPHP1O15172 72 aa4.59□□□□□ -1.67
CDH8-207ENST00000582242 KRTAP4-3Q9BYR4 195 aa4.59□□□□□ -1.67
CDH8-207ENST00000582242 VPS13DQ5THJ4 4388 aa4.58□□□□□ -1.68
CDH8-207ENST00000582242 LINC00313P59037 77 aa4.58□□□□□ -1.68
CDH8-207ENST00000582242 DNAH7Q8WXX0 4024 aa4.58□□□□□ -1.68
CDH8-207ENST00000582242 PLECQ15149 4684 aaKnown RBP4.57□□□□□ -1.68
CDH8-207ENST00000582242 A8MUN3 132 aa4.57□□□□□ -1.68
CDH8-207ENST00000582242 PRR15LQ9BU68 103 aa4.57□□□□□ -1.68
CDH8-207ENST00000582242 LYSTQ99698 3801 aa4.56□□□□□ -1.68
CDH8-207ENST00000582242 KRTAP13-3Q3SY46 172 aa4.56□□□□□ -1.68
CDH8-207ENST00000582242 Q5VV11 94 aa4.56□□□□□ -1.68
CDH8-207ENST00000582242 CSMD3Q7Z407 3707 aa4.55□□□□□ -1.68
CDH8-207ENST00000582242 STARD9Q9P2P6 4700 aa4.55□□□□□ -1.68
CDH8-207ENST00000582242 DNAH6Q9C0G6 4158 aa4.55□□□□□ -1.68
CDH8-207ENST00000582242 LINC01558Q9Y6Z2 57 aa4.55□□□□□ -1.68
CDH8-207ENST00000582242 CHKB-CPT1BH3BT56 60 aa4.54□□□□□ -1.68
CDH8-207ENST00000582242 ACYP2P14621 99 aa4.54□□□□□ -1.68
CDH8-207ENST00000582242 PRKDCP78527 4128 aaKnown RBP4.54□□□□□ -1.68
CDH8-207ENST00000582242 HRES1P13985 223 aa4.53□□□□□ -1.68
CDH8-207ENST00000582242 KRTAP10-1P60331 282 aa4.53□□□□□ -1.68
CDH8-207ENST00000582242 KRTAP21-3Q3LHN1 58 aa4.53□□□□□ -1.68
CDH8-207ENST00000582242 KRTAP13-2Q52LG2 175 aa4.53□□□□□ -1.68
CDH8-207ENST00000582242 DNAH17Q9UFH2 4485 aa4.52□□□□□ -1.69
CDH8-207ENST00000582242 SPINK1P00995 79 aa4.52□□□□□ -1.69
CDH8-207ENST00000582242 RPS29P62273 56 aaKnown RBP4.51□□□□□ -1.69
CDH8-207ENST00000582242 TENM2Q9NT68 2774 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms