RNA–Protein interactions for RNA: ENST00000581442.5

GAPLINC-204, gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA, humanhuman

TSL 3

Gene GAPLINC, Length 450 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPLINC-204ENST00000581442 DEFB104AQ8WTQ1 72 aa0.22□□□□□ -2.37
GAPLINC-204ENST00000581442 PPP1R1CQ8WVI7 109 aa0.22□□□□□ -2.37
GAPLINC-204ENST00000581442 RPL39LQ96EH5 51 aaKnown RBP0.22□□□□□ -2.37
GAPLINC-204ENST00000581442 S100A16Q96FQ6 103 aaKnown RBP0.22□□□□□ -2.37
GAPLINC-204ENST00000581442 LINC01600Q96MT4 127 aa0.22□□□□□ -2.37
GAPLINC-204ENST00000581442 AQP10Q96PS8 301 aa0.22□□□□□ -2.37
GAPLINC-204ENST00000581442 SMIM2Q9BVW6 85 aa0.22□□□□□ -2.37
GAPLINC-204ENST00000581442 NMES1Q9C002 83 aa0.22□□□□□ -2.37
GAPLINC-204ENST00000581442 AGPAT4-IT1Q9H0P7 198 aa0.22□□□□□ -2.37
GAPLINC-204ENST00000581442 DPH3P1Q9H4G8 78 aa0.22□□□□□ -2.37
GAPLINC-204ENST00000581442 NPVFQ9HCQ7 196 aa0.22□□□□□ -2.37
GAPLINC-204ENST00000581442 MANBALQ9NQG1 85 aa0.22□□□□□ -2.37
GAPLINC-204ENST00000581442 TMEM242Q9NWH2 141 aa0.22□□□□□ -2.37
GAPLINC-204ENST00000581442 PSENENQ9NZ42 101 aa0.22□□□□□ -2.37
GAPLINC-204ENST00000581442 MRPL35Q9NZE8 188 aaKnown RBP0.22□□□□□ -2.37
GAPLINC-204ENST00000581442 APOBP04114 4563 aaKnown RBP0.22□□□□□ -2.37
GAPLINC-204ENST00000581442 LRP1Q07954 4544 aaKnown RBP0.22□□□□□ -2.37
GAPLINC-204ENST00000581442 HMCN2Q8NDA2 5059 aa0.22□□□□□ -2.37
GAPLINC-204ENST00000581442 DNAH11Q96DT5 4516 aa0.21□□□□□ -2.38
GAPLINC-204ENST00000581442 TRBV7-3A0A075B6L6 115 aa0.21□□□□□ -2.38
GAPLINC-204ENST00000581442 LINC00959A0A1B0GUT2 108 aa0.21□□□□□ -2.38
GAPLINC-204ENST00000581442 K7ERU9 68 aa0.21□□□□□ -2.38
GAPLINC-204ENST00000581442 NDUFA1O15239 70 aa0.21□□□□□ -2.38
GAPLINC-204ENST00000581442 BCE1O60756 84 aa0.21□□□□□ -2.38
GAPLINC-204ENST00000581442 KRTAP2-3P0C7H8 128 aa0.21□□□□□ -2.38
GAPLINC-204ENST00000581442 SPINK8P0C7L1 97 aa0.21□□□□□ -2.38
GAPLINC-204ENST00000581442 GNG4P50150 75 aa0.21□□□□□ -2.38
GAPLINC-204ENST00000581442 UBE2D1P51668 147 aa0.21□□□□□ -2.38
GAPLINC-204ENST00000581442 ELOF1P60002 83 aaKnown RBP0.21□□□□□ -2.38
GAPLINC-204ENST00000581442 NPC2P61916 151 aa0.21□□□□□ -2.38
GAPLINC-204ENST00000581442 RPL39P62891 51 aaKnown RBP0.21□□□□□ -2.38
GAPLINC-204ENST00000581442 MT1HP80294 61 aa0.21□□□□□ -2.38
GAPLINC-204ENST00000581442 PRLHP81277 87 aa0.21□□□□□ -2.38
GAPLINC-204ENST00000581442 SERF2P84101 59 aa0.21□□□□□ -2.38
GAPLINC-204ENST00000581442 COX6A2Q02221 97 aa0.21□□□□□ -2.38
GAPLINC-204ENST00000581442 Q0VG73 95 aa0.21□□□□□ -2.38
GAPLINC-204ENST00000581442 C9orf116Q5BN46 136 aaPredicted RBP0.21□□□□□ -2.38
GAPLINC-204ENST00000581442 ALKAL2Q6UX46 152 aa0.21□□□□□ -2.38
GAPLINC-204ENST00000581442 ATP11AUNQ6ZP68 121 aa0.21□□□□□ -2.38
GAPLINC-204ENST00000581442 Q8IZM0 81 aa0.21□□□□□ -2.38
GAPLINC-204ENST00000581442 KCNRGQ8N5I3 272 aa0.21□□□□□ -2.38
GAPLINC-204ENST00000581442 S100ZQ8WXG8 99 aa0.21□□□□□ -2.38
GAPLINC-204ENST00000581442 IFI27L1Q96BM0 104 aa0.21□□□□□ -2.38
GAPLINC-204ENST00000581442 DMAC1Q96GE9 116 aa0.21□□□□□ -2.38
GAPLINC-204ENST00000581442 KRTAP2-4Q9BYR9 128 aa0.21□□□□□ -2.38
GAPLINC-204ENST00000581442 KRTAP2-1Q9BYU5 128 aa0.21□□□□□ -2.38
GAPLINC-204ENST00000581442 TMEM191AQ9H0A3 160 aa0.21□□□□□ -2.38
GAPLINC-204ENST00000581442 TMEM167BQ9NRX6 74 aa0.21□□□□□ -2.38
GAPLINC-204ENST00000581442 SPANXCQ9NY87 97 aa0.21□□□□□ -2.38
GAPLINC-204ENST00000581442 GNG13Q9P2W3 67 aa0.21□□□□□ -2.38
GAPLINC-204ENST00000581442 LINC00474Q9P2X8 69 aa0.21□□□□□ -2.38
GAPLINC-204ENST00000581442 C6orf48Q9UBA6 75 aa0.21□□□□□ -2.38
GAPLINC-204ENST00000581442 UBE2D4Q9Y2X8 147 aa0.21□□□□□ -2.38
GAPLINC-204ENST00000581442 V9GYV3 84 aa0.21□□□□□ -2.38
GAPLINC-204ENST00000581442 MUC2Q02817 5179 aa0.21□□□□□ -2.38
GAPLINC-204ENST00000581442 FAT3Q8TDW7 4589 aa0.21□□□□□ -2.38
GAPLINC-204ENST00000581442 PLECQ15149 4684 aaKnown RBP0.21□□□□□ -2.38
GAPLINC-204ENST00000581442 DYNC1H1Q14204 4646 aaKnown RBP0.21□□□□□ -2.38
GAPLINC-204ENST00000581442 FAT1Q14517 4588 aa0.21□□□□□ -2.38
GAPLINC-204ENST00000581442 DNAH5Q8TE73 4624 aa0.2□□□□□ -2.38
GAPLINC-204ENST00000581442 FAT4Q6V0I7 4981 aa0.2□□□□□ -2.38
GAPLINC-204ENST00000581442 DNAH8Q96JB1 4490 aa0.2□□□□□ -2.38
GAPLINC-204ENST00000581442 TRBV20-1A0A075B6N2 111 aa0.2□□□□□ -2.38
GAPLINC-204ENST00000581442 TRBV10-3A0A0K0K1G6 114 aa0.2□□□□□ -2.38
GAPLINC-204ENST00000581442 A0A1B0GUT8 65 aa0.2□□□□□ -2.38
GAPLINC-204ENST00000581442 KANTRA0A1W2PQU2 76 aa0.2□□□□□ -2.38
GAPLINC-204ENST00000581442 SMIM27A0A1W2PRY6 76 aa0.2□□□□□ -2.38
GAPLINC-204ENST00000581442 LINC01546A6NGU7 62 aa0.2□□□□□ -2.38
GAPLINC-204ENST00000581442 IGIPA6NJ69 53 aa0.2□□□□□ -2.38
GAPLINC-204ENST00000581442 UMAD1C9J7I0 102 aa0.2□□□□□ -2.38
GAPLINC-204ENST00000581442 D6R8Y8 96 aa0.2□□□□□ -2.38
GAPLINC-204ENST00000581442 F2Z2F3 143 aa0.2□□□□□ -2.38
GAPLINC-204ENST00000581442 F8VRH5 84 aa0.2□□□□□ -2.38
GAPLINC-204ENST00000581442 I3L3M4 83 aa0.2□□□□□ -2.38
GAPLINC-204ENST00000581442 MT2AP02795 61 aa0.2□□□□□ -2.38
GAPLINC-204ENST00000581442 MT1FP04733 61 aa0.2□□□□□ -2.38
GAPLINC-204ENST00000581442 IGLC3P0DOY3 106 aa0.2□□□□□ -2.38
GAPLINC-204ENST00000581442 FCER1GP30273 86 aa0.2□□□□□ -2.38
GAPLINC-204ENST00000581442 SPRR1AP35321 89 aa0.2□□□□□ -2.38
GAPLINC-204ENST00000581442 IFI27P40305 119 aaPredicted RBP0.2□□□□□ -2.38
GAPLINC-204ENST00000581442 POLR2KP53803 58 aaKnown RBP0.2□□□□□ -2.38
GAPLINC-204ENST00000581442 RPS29P62273 56 aaKnown RBP0.2□□□□□ -2.38
GAPLINC-204ENST00000581442 ADIRFQ15847 76 aa0.2□□□□□ -2.38
GAPLINC-204ENST00000581442 PMCHL1Q16048 86 aa0.2□□□□□ -2.38
GAPLINC-204ENST00000581442 SPANXN1Q5VSR9 72 aa0.2□□□□□ -2.38
GAPLINC-204ENST00000581442 LINC01545Q5VT33 79 aa0.2□□□□□ -2.38
GAPLINC-204ENST00000581442 MRPL54Q6P161 138 aaKnown RBP0.2□□□□□ -2.38
GAPLINC-204ENST00000581442 Q6ZRX8 168 aa0.2□□□□□ -2.38
GAPLINC-204ENST00000581442 C5orf38Q86SI9 138 aa0.2□□□□□ -2.38
GAPLINC-204ENST00000581442 BAGE2Q86Y30 109 aa0.2□□□□□ -2.38
GAPLINC-204ENST00000581442 COX7B2Q8TF08 81 aa0.2□□□□□ -2.38
GAPLINC-204ENST00000581442 TMEM141Q96I45 108 aa0.2□□□□□ -2.38
GAPLINC-204ENST00000581442 SPRR4Q96PI1 79 aa0.2□□□□□ -2.38
GAPLINC-204ENST00000581442 AMELXQ99217 191 aa0.2□□□□□ -2.38
GAPLINC-204ENST00000581442 C2orf88Q9BSF0 95 aa0.2□□□□□ -2.38
GAPLINC-204ENST00000581442 ST20Q9HBF5 79 aa0.2□□□□□ -2.38
GAPLINC-204ENST00000581442 CDC42SE2Q9NRR3 84 aa0.2□□□□□ -2.38
GAPLINC-204ENST00000581442 CDKN2A-AS1Q9UH64 79 aa0.2□□□□□ -2.38
GAPLINC-204ENST00000581442 NDUFA12Q9UI09 145 aa0.2□□□□□ -2.38
GAPLINC-204ENST00000581442 ERG28Q9UKR5 140 aa0.2□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms