RNA–Protein interactions for RNA: ENST00000578373.5

ERBB2-206, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 4,523 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-206ENST00000578373 CDC42SE1Q9NRR8 79 aa7.29□□□□□ -1.24
ERBB2-206ENST00000578373 SPINT4Q6UDR6 99 aa7.28□□□□□ -1.24
ERBB2-206ENST00000578373 Q5VV11 94 aa7.28□□□□□ -1.24
ERBB2-206ENST00000578373 TENM2Q9NT68 2774 aa7.27□□□□□ -1.25
ERBB2-206ENST00000578373 KRTAP7-1Q8IUC3 87 aa7.27□□□□□ -1.25
ERBB2-206ENST00000578373 TGP01266 2768 aa7.25□□□□□ -1.25
ERBB2-206ENST00000578373 SPRR1BP22528 89 aa7.25□□□□□ -1.25
ERBB2-206ENST00000578373 A0A0D9SG42 100 aa7.25□□□□□ -1.25
ERBB2-206ENST00000578373 VPS13CQ709C8 3753 aa7.25□□□□□ -1.25
ERBB2-206ENST00000578373 SPINK7P58062 85 aa7.24□□□□□ -1.25
ERBB2-206ENST00000578373 SRRM2Q9UQ35 2752 aaKnown RBP7.24□□□□□ -1.25
ERBB2-206ENST00000578373 PRAC1Q96KF2 57 aa7.23□□□□□ -1.25
ERBB2-206ENST00000578373 J3QL48 77 aa7.23□□□□□ -1.25
ERBB2-206ENST00000578373 A0A087X002 238 aa7.22□□□□□ -1.25
ERBB2-206ENST00000578373 NOTCH2NLQ7Z3S9 236 aa7.22□□□□□ -1.25
ERBB2-206ENST00000578373 PLAC8Q9NZF1 115 aa7.21□□□□□ -1.25
ERBB2-206ENST00000578373 LINC01554Q52M75 96 aa7.2□□□□□ -1.26
ERBB2-206ENST00000578373 COX6B2Q6YFQ2 88 aa7.2□□□□□ -1.26
ERBB2-206ENST00000578373 Q75L30 129 aa7.2□□□□□ -1.26
ERBB2-206ENST00000578373 KRTAP29-1A8MX34 341 aaPredicted RBP7.19□□□□□ -1.26
ERBB2-206ENST00000578373 Q5W150 140 aa7.19□□□□□ -1.26
ERBB2-206ENST00000578373 KRTAP10-2P60368 255 aa7.18□□□□□ -1.26
ERBB2-206ENST00000578373 LCA10Q71F78 164 aa7.18□□□□□ -1.26
ERBB2-206ENST00000578373 LINC01558Q9Y6Z2 57 aa7.17□□□□□ -1.26
ERBB2-206ENST00000578373 CRIPTQ9P021 101 aa7.17□□□□□ -1.26
ERBB2-206ENST00000578373 RBM12B-AS1Q9P1G2 102 aa7.16□□□□□ -1.26
ERBB2-206ENST00000578373 ZCCHC13Q8WW36 166 aaKnown RBP7.16□□□□□ -1.26
ERBB2-206ENST00000578373 A8MU10 97 aa7.15□□□□□ -1.27
ERBB2-206ENST00000578373 KRTAP10-1P60331 282 aa7.11□□□□□ -1.27
ERBB2-206ENST00000578373 A0A1B0GU33 70 aa7.09□□□□□ -1.28
ERBB2-206ENST00000578373 LINC00483Q53H64 154 aa7.02□□□□□ -1.28
ERBB2-206ENST00000578373 ZNF469Q96JG9 3925 aaPredicted RBP7.02□□□□□ -1.29
ERBB2-206ENST00000578373 Q6ZR54 194 aa7.02□□□□□ -1.29
ERBB2-206ENST00000578373 Q6ZSA8 131 aa7.02□□□□□ -1.29
ERBB2-206ENST00000578373 Q6ZRN7 208 aaPredicted RBP7.01□□□□□ -1.29
ERBB2-206ENST00000578373 TRRAPQ9Y4A5 3859 aa7□□□□□ -1.29
ERBB2-206ENST00000578373 CSAG1Q6PB30 78 aa7□□□□□ -1.29
ERBB2-206ENST00000578373 LCE6AA0A183 80 aa6.97□□□□□ -1.29
ERBB2-206ENST00000578373 DMAC1Q96GE9 116 aa6.97□□□□□ -1.29
ERBB2-206ENST00000578373 FBN3Q75N90 2809 aa6.93□□□□□ -1.3
ERBB2-206ENST00000578373 KRTAP13-1Q8IUC0 172 aa6.92□□□□□ -1.3
ERBB2-206ENST00000578373 SPATA8Q6RVD6 105 aa6.9□□□□□ -1.31
ERBB2-206ENST00000578373 ADM2Q7Z4H4 148 aa6.89□□□□□ -1.31
ERBB2-206ENST00000578373 KRTAP13-2Q52LG2 175 aa6.88□□□□□ -1.31
ERBB2-206ENST00000578373 CAMK2N1Q7Z7J9 78 aa6.88□□□□□ -1.31
ERBB2-206ENST00000578373 S4R3F8 94 aa6.85□□□□□ -1.31
ERBB2-206ENST00000578373 COL7A1Q02388 2944 aa6.83□□□□□ -1.32
ERBB2-206ENST00000578373 Q5VSD8 79 aa6.83□□□□□ -1.32
ERBB2-206ENST00000578373 ANK3Q12955 4377 aaKnown RBP6.82□□□□□ -1.32
ERBB2-206ENST00000578373 A6NN06 94 aa6.8□□□□□ -1.32
ERBB2-206ENST00000578373 R4GN34 69 aa6.79□□□□□ -1.32
ERBB2-206ENST00000578373 M0R2T5 61 aa6.77□□□□□ -1.33
ERBB2-206ENST00000578373 LUZP6Q538Z0 58 aa6.77□□□□□ -1.33
ERBB2-206ENST00000578373 H3BS24 57 aa6.76□□□□□ -1.33
ERBB2-206ENST00000578373 RPL37P61927 97 aaKnown RBP6.76□□□□□ -1.33
ERBB2-206ENST00000578373 H1FX-AS1Q4G0G2 97 aa6.76□□□□□ -1.33
ERBB2-206ENST00000578373 MEGF8Q7Z7M0 2845 aa6.72□□□□□ -1.33
ERBB2-206ENST00000578373 ASB16-AS1Q495Z4 193 aa6.7□□□□□ -1.34
ERBB2-206ENST00000578373 AKAP9Q99996 3911 aa6.69□□□□□ -1.34
ERBB2-206ENST00000578373 M0QZ58 72 aa6.67□□□□□ -1.34
ERBB2-206ENST00000578373 ROMO1P60602 79 aa6.66□□□□□ -1.34
ERBB2-206ENST00000578373 SEC61BP60468 96 aaKnown RBP6.66□□□□□ -1.34
ERBB2-206ENST00000578373 CSMD3Q7Z407 3707 aa6.63□□□□□ -1.35
ERBB2-206ENST00000578373 KRTAP1-4P0C5Y4 121 aa6.59□□□□□ -1.35
ERBB2-206ENST00000578373 RPS29P62273 56 aaKnown RBP6.52□□□□□ -1.37
ERBB2-206ENST00000578373 KRTAP25-1Q3LHN0 102 aa6.52□□□□□ -1.37
ERBB2-206ENST00000578373 A8MUU9 505 aa6.47□□□□□ -1.37
ERBB2-206ENST00000578373 KRTAP21-3Q3LHN1 58 aa6.46□□□□□ -1.38
ERBB2-206ENST00000578373 KRTAP16-1A8MUX0 517 aa6.45□□□□□ -1.38
ERBB2-206ENST00000578373 C20orf166-AS1Q96NR2 134 aa6.44□□□□□ -1.38
ERBB2-206ENST00000578373 H0YAA0 97 aa6.42□□□□□ -1.38
ERBB2-206ENST00000578373 C10orf95Q9H7T3 257 aa6.41□□□□□ -1.38
ERBB2-206ENST00000578373 A0A0A0MQY5 61 aa6.38□□□□□ -1.39
ERBB2-206ENST00000578373 KRTAP13-3Q3SY46 172 aa6.38□□□□□ -1.39
ERBB2-206ENST00000578373 NDUFAF8A1L188 74 aa6.35□□□□□ -1.39
ERBB2-206ENST00000578373 PLAC4Q8WY50 150 aa6.33□□□□□ -1.4
ERBB2-206ENST00000578373 XP32Q5T750 250 aa6.31□□□□□ -1.4
ERBB2-206ENST00000578373 P0C880 135 aa6.28□□□□□ -1.4
ERBB2-206ENST00000578373 DNHD1Q96M86 4753 aa6.28□□□□□ -1.4
ERBB2-206ENST00000578373 HUWE1Q7Z6Z7 4374 aaKnown RBP6.18□□□□□ -1.42
ERBB2-206ENST00000578373 A0A1B0GVY2 172 aa6.15□□□□□ -1.43
ERBB2-206ENST00000578373 KRTAP3-1Q9BYR8 98 aa6.13□□□□□ -1.43
ERBB2-206ENST00000578373 TNP1P09430 55 aa6.11□□□□□ -1.43
ERBB2-206ENST00000578373 ANK2Q01484 3957 aa6.07□□□□□ -1.44
ERBB2-206ENST00000578373 KRTAP10-8P60410 259 aa6.07□□□□□ -1.44
ERBB2-206ENST00000578373 DNAH9Q9NYC9 4486 aa6.07□□□□□ -1.44
ERBB2-206ENST00000578373 PRKDCP78527 4128 aaKnown RBP6.06□□□□□ -1.44
ERBB2-206ENST00000578373 TPRXLQ17RH7 258 aa6.03□□□□□ -1.44
ERBB2-206ENST00000578373 KRTAP12-2P59991 146 aa6.01□□□□□ -1.45
ERBB2-206ENST00000578373 PLECQ15149 4684 aaKnown RBP6□□□□□ -1.45
ERBB2-206ENST00000578373 KRTAP13-4Q3LI77 160 aa5.96□□□□□ -1.45
ERBB2-206ENST00000578373 DNAH10Q8IVF4 4471 aa5.95□□□□□ -1.46
ERBB2-206ENST00000578373 STARD9Q9P2P6 4700 aa5.92□□□□□ -1.46
ERBB2-206ENST00000578373 PP632Q6XCG6 107 aa5.91□□□□□ -1.46
ERBB2-206ENST00000578373 DNAH11Q96DT5 4516 aa5.89□□□□□ -1.47
ERBB2-206ENST00000578373 KRTAP10-6P60371 365 aaPredicted RBP5.89□□□□□ -1.47
ERBB2-206ENST00000578373 KRTAP12-1P59990 96 aa5.88□□□□□ -1.47
ERBB2-206ENST00000578373 LYSTQ99698 3801 aa5.88□□□□□ -1.47
ERBB2-206ENST00000578373 KRTAP10-10P60014 251 aa5.87□□□□□ -1.47
ERBB2-206ENST00000578373 CMYA5Q8N3K9 4069 aa5.84□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 186.5 ms