RNA–Protein interactions for RNA: ENST00000578093.1

PTPRM-206, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 464 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-206ENST00000578093 HIST1H4GQ99525 98 aa2.1□□□□□ -2.07
PTPRM-206ENST00000578093 Q9BRP9 147 aa2.1□□□□□ -2.07
PTPRM-206ENST00000578093 NXT2Q9NPJ8 142 aaKnown RBP2.1□□□□□ -2.07
PTPRM-206ENST00000578093 LAMTOR3Q9UHA4 124 aa2.1□□□□□ -2.07
PTPRM-206ENST00000578093 TRBV10-3A0A0K0K1G6 114 aa2.09□□□□□ -2.07
PTPRM-206ENST00000578093 FAM236AA0A1B0GUQ0 79 aa2.09□□□□□ -2.07
PTPRM-206ENST00000578093 FAM236BA0A1B0GV22 79 aa2.09□□□□□ -2.07
PTPRM-206ENST00000578093 LINC01546A6NGU7 62 aa2.09□□□□□ -2.07
PTPRM-206ENST00000578093 C11orf86A6NJI1 115 aa2.09□□□□□ -2.07
PTPRM-206ENST00000578093 K7ERJ3 54 aa2.09□□□□□ -2.07
PTPRM-206ENST00000578093 ATOX1O00244 68 aa2.09□□□□□ -2.07
PTPRM-206ENST00000578093 IGKCP01834 107 aa2.09□□□□□ -2.07
PTPRM-206ENST00000578093 CD164Q04900 197 aa2.09□□□□□ -2.07
PTPRM-206ENST00000578093 COX17Q14061 63 aa2.09□□□□□ -2.07
PTPRM-206ENST00000578093 TMEM170BQ5T4T1 132 aa2.09□□□□□ -2.07
PTPRM-206ENST00000578093 Q5XG85 94 aa2.09□□□□□ -2.07
PTPRM-206ENST00000578093 LOC107984156A0A0G2JMH3 177 aa2.08□□□□□ -2.08
PTPRM-206ENST00000578093 FAM236DA0A1B0GTK5 79 aa2.08□□□□□ -2.08
PTPRM-206ENST00000578093 ETDCA0A1B0GVM5 59 aa2.08□□□□□ -2.08
PTPRM-206ENST00000578093 J3QQQ9 107 aa2.08□□□□□ -2.08
PTPRM-206ENST00000578093 FAM236CP0DP71 79 aa2.08□□□□□ -2.08
PTPRM-206ENST00000578093 LINC00158P58513 81 aa2.08□□□□□ -2.08
PTPRM-206ENST00000578093 COX6B2Q6YFQ2 88 aa2.08□□□□□ -2.08
PTPRM-206ENST00000578093 SSBP3-AS1Q7Z2R9 100 aa2.08□□□□□ -2.08
PTPRM-206ENST00000578093 PCP2Q8IVA1 136 aa2.08□□□□□ -2.08
PTPRM-206ENST00000578093 ARL17AQ8IVW1 177 aa2.08□□□□□ -2.08
PTPRM-206ENST00000578093 ST20-AS1Q8NBB2 130 aa2.08□□□□□ -2.08
PTPRM-206ENST00000578093 IFI27L1Q96BM0 104 aa2.08□□□□□ -2.08
PTPRM-206ENST00000578093 KCNQ1DNQ9H478 68 aa2.08□□□□□ -2.08
PTPRM-206ENST00000578093 SERP1Q9Y6X1 66 aa2.08□□□□□ -2.08
PTPRM-206ENST00000578093 SMIM26A0A096LP01 95 aa2.07□□□□□ -2.08
PTPRM-206ENST00000578093 IGLV6-57P01721 117 aa2.07□□□□□ -2.08
PTPRM-206ENST00000578093 HBDP02042 147 aa2.07□□□□□ -2.08
PTPRM-206ENST00000578093 NPC2P61916 151 aa2.07□□□□□ -2.08
PTPRM-206ENST00000578093 PMAIP1Q13794 54 aa2.07□□□□□ -2.08
PTPRM-206ENST00000578093 ATXN8Q156A1 80 aa2.07□□□□□ -2.08
PTPRM-206ENST00000578093 LINC00643Q86TS7 51 aa2.07□□□□□ -2.08
PTPRM-206ENST00000578093 MIR7-3HGQ8N6C7 128 aa2.07□□□□□ -2.08
PTPRM-206ENST00000578093 NEBP20929 6669 aa2.06□□□□□ -2.08
PTPRM-206ENST00000578093 TRBV10-2A0A0K0K1G8 114 aa2.06□□□□□ -2.08
PTPRM-206ENST00000578093 hADV29S1A0JD25 119 aa2.06□□□□□ -2.08
PTPRM-206ENST00000578093 LINC01549A6NIU2 74 aa2.06□□□□□ -2.08
PTPRM-206ENST00000578093 H3BT86 120 aa2.06□□□□□ -2.08
PTPRM-206ENST00000578093 TCL1BO95988 128 aa2.06□□□□□ -2.08
PTPRM-206ENST00000578093 HERVK_113P61574 105 aa2.06□□□□□ -2.08
PTPRM-206ENST00000578093 RPL37P61927 97 aaKnown RBP2.06□□□□□ -2.08
PTPRM-206ENST00000578093 Q1RN00 199 aa2.06□□□□□ -2.08
PTPRM-206ENST00000578093 Q6ZRX8 168 aa2.06□□□□□ -2.08
PTPRM-206ENST00000578093 SERP2Q8N6R1 65 aa2.06□□□□□ -2.08
PTPRM-206ENST00000578093 DHRS4-AS1Q9P1J3 65 aa2.06□□□□□ -2.08
PTPRM-206ENST00000578093 TMEM223A0PJW6 202 aa2.05□□□□□ -2.08
PTPRM-206ENST00000578093 PLNP26678 52 aa2.05□□□□□ -2.08
PTPRM-206ENST00000578093 TSPEAR-AS2P59090 65 aa2.05□□□□□ -2.08
PTPRM-206ENST00000578093 PRO1854Q9UHT4 67 aa2.05□□□□□ -2.08
PTPRM-206ENST00000578093 A0A0B4J2C4 111 aa2.04□□□□□ -2.08
PTPRM-206ENST00000578093 A0A0G2JQZ4 141 aa2.04□□□□□ -2.08
PTPRM-206ENST00000578093 H7C2G1 150 aa2.04□□□□□ -2.08
PTPRM-206ENST00000578093 COX6CP09669 75 aa2.04□□□□□ -2.08
PTPRM-206ENST00000578093 ATP5EP56381 51 aaPredicted RBP2.04□□□□□ -2.08
PTPRM-206ENST00000578093 HIST1H4AP62805 103 aaKnown RBP2.04□□□□□ -2.08
PTPRM-206ENST00000578093 SFTA2Q6UW10 78 aa2.04□□□□□ -2.08
PTPRM-206ENST00000578093 BRK1Q8WUW1 75 aa2.04□□□□□ -2.08
PTPRM-206ENST00000578093 DSCR8Q96T75 97 aa2.04□□□□□ -2.08
PTPRM-206ENST00000578093 LIMD2Q9BT23 127 aa2.04□□□□□ -2.08
PTPRM-206ENST00000578093 MUC12Q9UKN1 5478 aa2.04□□□□□ -2.08
PTPRM-206ENST00000578093 TRAV23DV6A0A075B6W5 121 aa2.03□□□□□ -2.08
PTPRM-206ENST00000578093 TRAV12-1A0A0B4J245 112 aa2.03□□□□□ -2.08
PTPRM-206ENST00000578093 TEX49A0A1B0GTD5 131 aa2.03□□□□□ -2.08
PTPRM-206ENST00000578093 MT2AP02795 61 aa2.03□□□□□ -2.08
PTPRM-206ENST00000578093 MT1FP04733 61 aa2.03□□□□□ -2.08
PTPRM-206ENST00000578093 SOSTDC1Q6X4U4 206 aa2.03□□□□□ -2.08
PTPRM-206ENST00000578093 SCGB1D4Q6XE38 83 aa2.03□□□□□ -2.08
PTPRM-206ENST00000578093 PRR15Q8IV56 129 aa2.03□□□□□ -2.08
PTPRM-206ENST00000578093 TRBV7-6A0A0J9YX20 115 aa2.02□□□□□ -2.09
PTPRM-206ENST00000578093 SPRR1BP22528 89 aa2.02□□□□□ -2.09
PTPRM-206ENST00000578093 ZNF815PA8K554 130 aa2.01□□□□□ -2.09
PTPRM-206ENST00000578093 NDUFC1O43677 76 aa2.01□□□□□ -2.09
PTPRM-206ENST00000578093 ZNF73O43830 326 aaPredicted RBP2.01□□□□□ -2.09
PTPRM-206ENST00000578093 LGALS3P17931 250 aaKnown RBP2.01□□□□□ -2.09
PTPRM-206ENST00000578093 S100A7L2Q5SY68 101 aa2.01□□□□□ -2.09
PTPRM-206ENST00000578093 TTTY13Q9BZ97 58 aa2.01□□□□□ -2.09
PTPRM-206ENST00000578093 HMCN1Q96RW7 5635 aa2□□□□□ -2.09
PTPRM-206ENST00000578093 Q6JHZ5 121 aa2□□□□□ -2.09
PTPRM-206ENST00000578093 NDUFS5O43920 106 aa1.99□□□□□ -2.09
PTPRM-206ENST00000578093 TIMM17BO60830 172 aa1.99□□□□□ -2.09
PTPRM-206ENST00000578093 RBM3P98179 157 aaKnown RBP1.99□□□□□ -2.09
PTPRM-206ENST00000578093 LCE3CQ5T5A8 94 aa1.99□□□□□ -2.09
PTPRM-206ENST00000578093 ATP5EP2Q5VTU8 51 aa1.99□□□□□ -2.09
PTPRM-206ENST00000578093 DEFB105AQ8NG35 78 aa1.99□□□□□ -2.09
PTPRM-206ENST00000578093 LST1O00453 97 aa1.98□□□□□ -2.09
PTPRM-206ENST00000578093 LEPROTO15243 131 aa1.98□□□□□ -2.09
PTPRM-206ENST00000578093 CCKP06307 115 aa1.98□□□□□ -2.09
PTPRM-206ENST00000578093 ELOF1P60002 83 aaKnown RBP1.98□□□□□ -2.09
PTPRM-206ENST00000578093 CXCL6P80162 114 aa1.98□□□□□ -2.09
PTPRM-206ENST00000578093 TRAV7A0A075B6U4 112 aa1.97□□□□□ -2.09
PTPRM-206ENST00000578093 TRAV13-2A0A0B4J235 113 aa1.97□□□□□ -2.09
PTPRM-206ENST00000578093 A0A0J9YXY3 114 aa1.97□□□□□ -2.09
PTPRM-206ENST00000578093 A8MU10 97 aa1.97□□□□□ -2.09
PTPRM-206ENST00000578093 DNAL4O96015 105 aa1.97□□□□□ -2.09
PTPRM-206ENST00000578093 COX7BP24311 80 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms