RNA–Protein interactions for RNA: ENST00000578029.1

KRT39-202, Transcript of keratin 39, humanhuman

TSL 3

Gene KRT39, Length 777 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39-202ENST00000578029 M0QY20 66 aa2.51□□□□□ -2.01
KRT39-202ENST00000578029 MRPL33O75394 65 aaKnown RBP2.51□□□□□ -2.01
KRT39-202ENST00000578029 RNASE3P12724 160 aaKnown RBP2.51□□□□□ -2.01
KRT39-202ENST00000578029 U3KQA8 63 aa2.51□□□□□ -2.01
KRT39-202ENST00000578029 ALPK2Q86TB3 2170 aa2.51□□□□□ -2.01
KRT39-202ENST00000578029 IGKV3-7A0A075B6H7 116 aa2.5□□□□□ -2.01
KRT39-202ENST00000578029 A0A096LNT2 108 aa2.5□□□□□ -2.01
KRT39-202ENST00000578029 A0A1W2PNN7 141 aa2.5□□□□□ -2.01
KRT39-202ENST00000578029 CCL3L1P16619 93 aa2.5□□□□□ -2.01
KRT39-202ENST00000578029 LINC00304Q8N9R0 145 aa2.5□□□□□ -2.01
KRT39-202ENST00000578029 USF3Q68DE3 2245 aa2.49□□□□□ -2.01
KRT39-202ENST00000578029 DEFB131BA0A096LNP1 70 aa2.49□□□□□ -2.01
KRT39-202ENST00000578029 Q6ZQY7 126 aa2.49□□□□□ -2.01
KRT39-202ENST00000578029 MINOS1-NBL1R4GNA1 71 aa2.49□□□□□ -2.01
KRT39-202ENST00000578029 ROS1P08922 2347 aa2.48□□□□□ -2.01
KRT39-202ENST00000578029 HYDINQ4G0P3 5121 aa2.48□□□□□ -2.01
KRT39-202ENST00000578029 KRTAP13-3Q3SY46 172 aa2.48□□□□□ -2.01
KRT39-202ENST00000578029 TENM1Q9UKZ4 2725 aa2.48□□□□□ -2.01
KRT39-202ENST00000578029 ABCA1O95477 2261 aa2.47□□□□□ -2.01
KRT39-202ENST00000578029 K7EIM0 57 aa2.47□□□□□ -2.01
KRT39-202ENST00000578029 DEFB109BQ30KR1 87 aa2.47□□□□□ -2.01
KRT39-202ENST00000578029 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.47□□□□□ -2.01
KRT39-202ENST00000578029 TENM3Q9P273 2699 aa2.47□□□□□ -2.01
KRT39-202ENST00000578029 IGKV3OR2-268A0A0C4DH90 116 aa2.46□□□□□ -2.02
KRT39-202ENST00000578029 COX6A2Q02221 97 aa2.46□□□□□ -2.02
KRT39-202ENST00000578029 PRB3Q04118 309 aaPredicted RBP2.46□□□□□ -2.02
KRT39-202ENST00000578029 C10orf55Q5SWW7 151 aa2.46□□□□□ -2.02
KRT39-202ENST00000578029 Q8IZM0 81 aa2.46□□□□□ -2.02
KRT39-202ENST00000578029 HRNRQ86YZ3 2850 aaPredicted RBP2.45□□□□□ -2.02
KRT39-202ENST00000578029 COX17Q14061 63 aa2.45□□□□□ -2.02
KRT39-202ENST00000578029 SMR3AQ99954 134 aa2.45□□□□□ -2.02
KRT39-202ENST00000578029 PSORS1C2Q9UIG4 136 aa2.45□□□□□ -2.02
KRT39-202ENST00000578029 VWFP04275 2813 aa2.45□□□□□ -2.02
KRT39-202ENST00000578029 TRGV1A0A0A0MS02 117 aa2.44□□□□□ -2.02
KRT39-202ENST00000578029 A0A1B0GU69 56 aa2.44□□□□□ -2.02
KRT39-202ENST00000578029 LINC00472Q9H8W2 130 aa2.44□□□□□ -2.02
KRT39-202ENST00000578029 MALRD1Q5VYJ5 2156 aa2.43□□□□□ -2.02
KRT39-202ENST00000578029 CADP27708 2225 aa2.43□□□□□ -2.02
KRT39-202ENST00000578029 HERC2O95714 4834 aa2.43□□□□□ -2.02
KRT39-202ENST00000578029 RYR2Q92736 4967 aa2.42□□□□□ -2.02
KRT39-202ENST00000578029 IGLV5-48A0A075B6I7 105 aa2.42□□□□□ -2.02
KRT39-202ENST00000578029 SPTY2D1-AS1A0A0U1RR47 76 aa2.42□□□□□ -2.02
KRT39-202ENST00000578029 SACSQ9NZJ4 4579 aa2.42□□□□□ -2.02
KRT39-202ENST00000578029 DNAH1Q9P2D7 4330 aa2.41□□□□□ -2.02
KRT39-202ENST00000578029 KLK9Q2XQG4 91 aa2.41□□□□□ -2.02
KRT39-202ENST00000578029 TP53AIP1Q9HCN2 124 aa2.41□□□□□ -2.02
KRT39-202ENST00000578029 DYNC2H1Q8NCM8 4307 aaKnown RBP2.41□□□□□ -2.02
KRT39-202ENST00000578029 A0A087WTM6 91 aa2.4□□□□□ -2.03
KRT39-202ENST00000578029 K7EQZ3 153 aa2.4□□□□□ -2.03
KRT39-202ENST00000578029 ACYP2P14621 99 aa2.4□□□□□ -2.03
KRT39-202ENST00000578029 DEFB133Q30KQ1 61 aa2.4□□□□□ -2.03
KRT39-202ENST00000578029 KRTAP5-1Q6L8H4 278 aa2.4□□□□□ -2.03
KRT39-202ENST00000578029 DEFB104AQ8WTQ1 72 aa2.4□□□□□ -2.03
KRT39-202ENST00000578029 COL7A1Q02388 2944 aa2.39□□□□□ -2.03
KRT39-202ENST00000578029 CMYA5Q8N3K9 4069 aa2.39□□□□□ -2.03
KRT39-202ENST00000578029 C4orf3Q8WVX3 66 aa2.39□□□□□ -2.03
KRT39-202ENST00000578029 ANGP03950 147 aaKnown RBP2.38□□□□□ -2.03
KRT39-202ENST00000578029 DEFB110Q30KQ9 67 aa2.38□□□□□ -2.03
KRT39-202ENST00000578029 PATE1Q8WXA2 126 aa2.38□□□□□ -2.03
KRT39-202ENST00000578029 TOMM7Q9P0U1 55 aa2.38□□□□□ -2.03
KRT39-202ENST00000578029 UBR4Q5T4S7 5183 aa2.37□□□□□ -2.03
KRT39-202ENST00000578029 STAB2Q8WWQ8 2551 aa2.37□□□□□ -2.03
KRT39-202ENST00000578029 TENM2Q9NT68 2774 aa2.37□□□□□ -2.03
KRT39-202ENST00000578029 CCL19Q99731 98 aa2.37□□□□□ -2.03
KRT39-202ENST00000578029 NBDYA0A0U1RRE5 68 aa2.36□□□□□ -2.03
KRT39-202ENST00000578029 LYNX1G3V0Z9 82 aa2.36□□□□□ -2.03
KRT39-202ENST00000578029 WFDC13Q8IUB5 93 aa2.36□□□□□ -2.03
KRT39-202ENST00000578029 Q96NJ1 140 aa2.36□□□□□ -2.03
KRT39-202ENST00000578029 BRD3OSQ6XYD6 125 aa2.35□□□□□ -2.03
KRT39-202ENST00000578029 KAAG1Q9UBP8 84 aa2.35□□□□□ -2.03
KRT39-202ENST00000578029 SORL1Q92673 2214 aa2.35□□□□□ -2.03
KRT39-202ENST00000578029 APELAP0DMC3 54 aa2.34□□□□□ -2.03
KRT39-202ENST00000578029 KRTAP10-8P60410 259 aa2.34□□□□□ -2.03
KRT39-202ENST00000578029 PCOTHQ58A44 107 aa2.33□□□□□ -2.04
KRT39-202ENST00000578029 WFDC10BQ8IUB3 73 aa2.33□□□□□ -2.04
KRT39-202ENST00000578029 C5orf56Q8N8D9 126 aa2.33□□□□□ -2.04
KRT39-202ENST00000578029 MINOS1Q5TGZ0 78 aa2.32□□□□□ -2.04
KRT39-202ENST00000578029 PRO2289Q9P1D8 64 aa2.32□□□□□ -2.04
KRT39-202ENST00000578029 C6orf48Q9UBA6 75 aa2.32□□□□□ -2.04
KRT39-202ENST00000578029 LY6G6CO95867 125 aa2.31□□□□□ -2.04
KRT39-202ENST00000578029 KRTAP10-10P60014 251 aa2.31□□□□□ -2.04
KRT39-202ENST00000578029 RPL37AP61513 92 aaKnown RBP2.31□□□□□ -2.04
KRT39-202ENST00000578029 LCE3DQ9BYE3 92 aa2.31□□□□□ -2.04
KRT39-202ENST00000578029 LYSTQ99698 3801 aa2.31□□□□□ -2.04
KRT39-202ENST00000578029 DNAH9Q9NYC9 4486 aa2.3□□□□□ -2.04
KRT39-202ENST00000578029 PLCE1Q9P212 2302 aa2.3□□□□□ -2.04
KRT39-202ENST00000578029 A0A0G2JQZ4 141 aa2.3□□□□□ -2.04
KRT39-202ENST00000578029 DEFB131AP59861 70 aa2.3□□□□□ -2.04
KRT39-202ENST00000578029 SSBP3-AS1Q7Z2R9 100 aa2.3□□□□□ -2.04
KRT39-202ENST00000578029 HERC1Q15751 4861 aa2.3□□□□□ -2.04
KRT39-202ENST00000578029 FRAS1Q86XX4 4008 aa2.3□□□□□ -2.04
KRT39-202ENST00000578029 KIAA1109Q2LD37 5005 aa2.3□□□□□ -2.04
KRT39-202ENST00000578029 GVQW2A0A096LPI5 108 aaPredicted RBP2.29□□□□□ -2.04
KRT39-202ENST00000578029 A8MTW9 85 aa2.29□□□□□ -2.04
KRT39-202ENST00000578029 KRTAP5-4Q6L8H1 288 aa2.28□□□□□ -2.04
KRT39-202ENST00000578029 KRTAP4-4Q9BYR3 166 aa2.28□□□□□ -2.04
KRT39-202ENST00000578029 ABCA13Q86UQ4 5058 aa2.28□□□□□ -2.04
KRT39-202ENST00000578029 MMP24-AS1A0A0U1RRL7 71 aa2.27□□□□□ -2.05
KRT39-202ENST00000578029 CSMD3Q7Z407 3707 aa2.27□□□□□ -2.05
KRT39-202ENST00000578029 DNAH3Q8TD57 4116 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 142.1 ms