RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 LEPROTL1O95214 131 aa3.44□□□□□ -1.86
NUP88-212ENST00000576708 IGLV6-57P01721 117 aa3.44□□□□□ -1.86
NUP88-212ENST00000576708 LGALS3P17931 250 aaKnown RBP3.44□□□□□ -1.86
NUP88-212ENST00000576708 Q6ZRX8 168 aa3.44□□□□□ -1.86
NUP88-212ENST00000576708 SSBP3-AS1Q7Z2R9 100 aa3.44□□□□□ -1.86
NUP88-212ENST00000576708 ARL17AQ8IVW1 177 aa3.44□□□□□ -1.86
NUP88-212ENST00000576708 TRAV23DV6A0A075B6W5 121 aa3.43□□□□□ -1.86
NUP88-212ENST00000576708 TRBV10-2A0A0K0K1G8 114 aa3.43□□□□□ -1.86
NUP88-212ENST00000576708 S100A7L2Q5SY68 101 aa3.43□□□□□ -1.86
NUP88-212ENST00000576708 A0A0J9YXY3 114 aa3.42□□□□□ -1.86
NUP88-212ENST00000576708 H3BT86 120 aa3.42□□□□□ -1.86
NUP88-212ENST00000576708 SLC25A20O43772 301 aa3.42□□□□□ -1.86
NUP88-212ENST00000576708 IGKCP01834 107 aa3.42□□□□□ -1.86
NUP88-212ENST00000576708 TRACP01848 142 aa3.42□□□□□ -1.86
NUP88-212ENST00000576708 PLNP26678 52 aa3.42□□□□□ -1.86
NUP88-212ENST00000576708 HERVK_113P61574 105 aa3.42□□□□□ -1.86
NUP88-212ENST00000576708 BVES-AS1Q5T3Y7 98 aa3.42□□□□□ -1.86
NUP88-212ENST00000576708 K7ERJ3 54 aa3.41□□□□□ -1.86
NUP88-212ENST00000576708 SNCGO76070 127 aa3.41□□□□□ -1.86
NUP88-212ENST00000576708 COX7CP15954 63 aa3.41□□□□□ -1.86
NUP88-212ENST00000576708 RPS29P62273 56 aaKnown RBP3.41□□□□□ -1.86
NUP88-212ENST00000576708 LINC01545Q5VT33 79 aa3.41□□□□□ -1.86
NUP88-212ENST00000576708 COPS9Q8WXC6 57 aa3.41□□□□□ -1.86
NUP88-212ENST00000576708 DSCR8Q96T75 97 aa3.41□□□□□ -1.86
NUP88-212ENST00000576708 SCGB1C2P0DMR2 95 aa3.4□□□□□ -1.87
NUP88-212ENST00000576708 SPCS1Q9Y6A9 102 aa3.4□□□□□ -1.87
NUP88-212ENST00000576708 TRBV7-7A0A0K0K1E9 115 aa3.39□□□□□ -1.87
NUP88-212ENST00000576708 A0A1W2PPM0 123 aa3.39□□□□□ -1.87
NUP88-212ENST00000576708 C9orf92A6NGG3 77 aa3.39□□□□□ -1.87
NUP88-212ENST00000576708 KRTAP19-2Q3LHN2 52 aa3.39□□□□□ -1.87
NUP88-212ENST00000576708 SPATA45Q537H7 98 aa3.39□□□□□ -1.87
NUP88-212ENST00000576708 PCOTHQ58A44 107 aa3.39□□□□□ -1.87
NUP88-212ENST00000576708 LINC00308Q8TCZ7 52 aa3.39□□□□□ -1.87
NUP88-212ENST00000576708 TTTY13Q9BZ97 58 aa3.39□□□□□ -1.87
NUP88-212ENST00000576708 TCL1BO95988 128 aa3.38□□□□□ -1.87
NUP88-212ENST00000576708 SPRR1BP22528 89 aa3.38□□□□□ -1.87
NUP88-212ENST00000576708 LINC01554Q52M75 96 aa3.38□□□□□ -1.87
NUP88-212ENST00000576708 DEFB105AQ8NG35 78 aa3.38□□□□□ -1.87
NUP88-212ENST00000576708 A0A0G2JQZ4 141 aa3.37□□□□□ -1.87
NUP88-212ENST00000576708 SYS1-DBNDD2H3BUS1 97 aa3.37□□□□□ -1.87
NUP88-212ENST00000576708 Q1RN00 199 aa3.37□□□□□ -1.87
NUP88-212ENST00000576708 C7orf65Q6ZTY9 151 aa3.37□□□□□ -1.87
NUP88-212ENST00000576708 FSIP2Q5CZC0 6907 aa3.36□□□□□ -1.87
NUP88-212ENST00000576708 IGLV8-61A0A075B6I0 122 aa3.36□□□□□ -1.87
NUP88-212ENST00000576708 ZNF815PA8K554 130 aa3.36□□□□□ -1.87
NUP88-212ENST00000576708 H7C2G1 150 aa3.36□□□□□ -1.87
NUP88-212ENST00000576708 COX7BP24311 80 aa3.36□□□□□ -1.87
NUP88-212ENST00000576708 KRTAP5-9P26371 169 aa3.36□□□□□ -1.87
NUP88-212ENST00000576708 MT1HP80294 61 aa3.36□□□□□ -1.87
NUP88-212ENST00000576708 PRO0461Q9UI25 63 aa3.36□□□□□ -1.87
NUP88-212ENST00000576708 TIMM17BO60830 172 aa3.35□□□□□ -1.87
NUP88-212ENST00000576708 ELOF1P60002 83 aaKnown RBP3.35□□□□□ -1.87
NUP88-212ENST00000576708 KRTAP10-12P60413 245 aa3.35□□□□□ -1.87
NUP88-212ENST00000576708 CXCL6P80162 114 aa3.35□□□□□ -1.87
NUP88-212ENST00000576708 KRTAP5-4Q6L8H1 288 aa3.35□□□□□ -1.87
NUP88-212ENST00000576708 PPDPFLQ8WWR9 84 aa3.35□□□□□ -1.87
NUP88-212ENST00000576708 DHRS4-AS1Q9P1J3 65 aa3.35□□□□□ -1.87
NUP88-212ENST00000576708 CRCT1Q9UGL9 99 aa3.35□□□□□ -1.87
NUP88-212ENST00000576708 ETDBQ3ZM63 59 aa3.34□□□□□ -1.87
NUP88-212ENST00000576708 LIMD2Q9BT23 127 aa3.34□□□□□ -1.87
NUP88-212ENST00000576708 KRTAP4-4Q9BYR3 166 aa3.34□□□□□ -1.87
NUP88-212ENST00000576708 TEX49A0A1B0GTD5 131 aa3.33□□□□□ -1.88
NUP88-212ENST00000576708 C3orf79P0CE67 100 aa3.33□□□□□ -1.88
NUP88-212ENST00000576708 DSCR10P59022 87 aa3.33□□□□□ -1.88
NUP88-212ENST00000576708 hADV29S1A0JD25 119 aa3.32□□□□□ -1.88
NUP88-212ENST00000576708 H3BUT2 72 aa3.32□□□□□ -1.88
NUP88-212ENST00000576708 KRTDAPP60985 99 aa3.32□□□□□ -1.88
NUP88-212ENST00000576708 A6NN06 94 aa3.31□□□□□ -1.88
NUP88-212ENST00000576708 ATP5EP56381 51 aaPredicted RBP3.31□□□□□ -1.88
NUP88-212ENST00000576708 MUSTN1Q8IVN3 82 aa3.31□□□□□ -1.88
NUP88-212ENST00000576708 IGLV5-48A0A075B6I7 105 aa3.3□□□□□ -1.88
NUP88-212ENST00000576708 ATOX1O00244 68 aa3.3□□□□□ -1.88
NUP88-212ENST00000576708 RPL37P61927 97 aaKnown RBP3.3□□□□□ -1.88
NUP88-212ENST00000576708 HIST1H4AP62805 103 aaKnown RBP3.3□□□□□ -1.88
NUP88-212ENST00000576708 A0A1B0GW54 56 aa3.29□□□□□ -1.88
NUP88-212ENST00000576708 SMIM11BQ8TCY0 68 aa3.29□□□□□ -1.88
NUP88-212ENST00000576708 OCR1Q9BZK8 76 aa3.29□□□□□ -1.88
NUP88-212ENST00000576708 FLGP20930 4061 aaPredicted RBP3.29□□□□□ -1.88
NUP88-212ENST00000576708 M0R2T5 61 aa3.28□□□□□ -1.88
NUP88-212ENST00000576708 CYSTM1Q9H1C7 97 aa3.28□□□□□ -1.88
NUP88-212ENST00000576708 KRTAP10-5P60370 271 aa3.27□□□□□ -1.89
NUP88-212ENST00000576708 COX6B2Q6YFQ2 88 aa3.27□□□□□ -1.89
NUP88-212ENST00000576708 CEND1Q8N111 149 aa3.27□□□□□ -1.89
NUP88-212ENST00000576708 LCE3CQ5T5A8 94 aa3.26□□□□□ -1.89
NUP88-212ENST00000576708 ATP11AUNQ6ZP68 121 aa3.26□□□□□ -1.89
NUP88-212ENST00000576708 TRAV13-2A0A0B4J235 113 aa3.25□□□□□ -1.89
NUP88-212ENST00000576708 LINC00575Q6W349 94 aa3.25□□□□□ -1.89
NUP88-212ENST00000576708 SERP2Q8N6R1 65 aa3.25□□□□□ -1.89
NUP88-212ENST00000576708 CLEC2BQ92478 149 aa3.25□□□□□ -1.89
NUP88-212ENST00000576708 NHP2Q9NX24 153 aaKnown RBP3.25□□□□□ -1.89
NUP88-212ENST00000576708 F8WEM9 126 aa3.24□□□□□ -1.89
NUP88-212ENST00000576708 CCKP06307 115 aa3.24□□□□□ -1.89
NUP88-212ENST00000576708 IGFL1Q6UW32 110 aa3.24□□□□□ -1.89
NUP88-212ENST00000576708 Q6ZQY7 126 aa3.24□□□□□ -1.89
NUP88-212ENST00000576708 OBSCN-AS1Q96MR7 158 aa3.24□□□□□ -1.89
NUP88-212ENST00000576708 C8orf17Q9NRJ1 99 aa3.23□□□□□ -1.89
NUP88-212ENST00000576708 HIGD1BQ9P298 99 aa3.23□□□□□ -1.89
NUP88-212ENST00000576708 C2orf91Q6ZV80 131 aa3.22□□□□□ -1.89
NUP88-212ENST00000576708 Q1T7F1 81 aa3.21□□□□□ -1.9
NUP88-212ENST00000576708 Q6JHZ5 121 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms