RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 KRTAP13-1Q8IUC0 172 aa8.62□□□□□ -1.03
SMG6-215ENST00000574501 FRAS1Q86XX4 4008 aa8.61□□□□□ -1.03
SMG6-215ENST00000574501 ANAPC11Q9NYG5 84 aa8.59□□□□□ -1.03
SMG6-215ENST00000574501 ACYP2P14621 99 aa8.56□□□□□ -1.04
SMG6-215ENST00000574501 SPINK6Q6UWN8 80 aa8.56□□□□□ -1.04
SMG6-215ENST00000574501 C14orf177Q52M58 125 aa8.54□□□□□ -1.04
SMG6-215ENST00000574501 UBE2DNLQ8IWF7 75 aa8.53□□□□□ -1.04
SMG6-215ENST00000574501 PLA2G1BP04054 148 aaKnown RBP8.52□□□□□ -1.05
SMG6-215ENST00000574501 C4orf48Q5BLP8 95 aa8.52□□□□□ -1.05
SMG6-215ENST00000574501 KRTAP13-3Q3SY46 172 aa8.52□□□□□ -1.05
SMG6-215ENST00000574501 WWC2-AS2Q96NR7 200 aa8.52□□□□□ -1.05
SMG6-215ENST00000574501 STAB2Q8WWQ8 2551 aa8.52□□□□□ -1.05
SMG6-215ENST00000574501 A0A1B0GU69 56 aa8.51□□□□□ -1.05
SMG6-215ENST00000574501 LINC00483Q53H64 154 aa8.51□□□□□ -1.05
SMG6-215ENST00000574501 DNHD1Q96M86 4753 aa8.5□□□□□ -1.05
SMG6-215ENST00000574501 KRTAP21-3Q3LHN1 58 aa8.5□□□□□ -1.05
SMG6-215ENST00000574501 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.5□□□□□ -1.05
SMG6-215ENST00000574501 LINC01554Q52M75 96 aa8.49□□□□□ -1.05
SMG6-215ENST00000574501 RETNLBQ9BQ08 111 aa8.48□□□□□ -1.05
SMG6-215ENST00000574501 DNAH8Q96JB1 4490 aa8.48□□□□□ -1.05
SMG6-215ENST00000574501 RTL8CO15255 209 aa8.46□□□□□ -1.06
SMG6-215ENST00000574501 DMAC1Q96GE9 116 aa8.46□□□□□ -1.06
SMG6-215ENST00000574501 SPATA8Q6RVD6 105 aa8.45□□□□□ -1.06
SMG6-215ENST00000574501 MIR22HGQ0VDD5 57 aa8.43□□□□□ -1.06
SMG6-215ENST00000574501 ZNF706Q9Y5V0 76 aaPredicted RBP8.43□□□□□ -1.06
SMG6-215ENST00000574501 SPACA4Q8TDM5 124 aa8.42□□□□□ -1.06
SMG6-215ENST00000574501 PSORS1C2Q9UIG4 136 aa8.42□□□□□ -1.06
SMG6-215ENST00000574501 HECTD4Q9Y4D8 3996 aa8.42□□□□□ -1.06
SMG6-215ENST00000574501 PLECQ15149 4684 aaKnown RBP8.4□□□□□ -1.06
SMG6-215ENST00000574501 CIRBP-AS1Q8TBR5 109 aa8.39□□□□□ -1.07
SMG6-215ENST00000574501 UQCR11O14957 56 aa8.39□□□□□ -1.07
SMG6-215ENST00000574501 APLNQ9ULZ1 77 aa8.39□□□□□ -1.07
SMG6-215ENST00000574501 CSAG1Q6PB30 78 aa8.37□□□□□ -1.07
SMG6-215ENST00000574501 IGLV5-52A0A0A0MRZ9 124 aa8.36□□□□□ -1.07
SMG6-215ENST00000574501 H3BS24 57 aa8.35□□□□□ -1.07
SMG6-215ENST00000574501 ZNF861PO60384 105 aa8.35□□□□□ -1.07
SMG6-215ENST00000574501 NBDYA0A0U1RRE5 68 aa8.33□□□□□ -1.08
SMG6-215ENST00000574501 Q6ZRN7 208 aaPredicted RBP8.33□□□□□ -1.08
SMG6-215ENST00000574501 MEGF8Q7Z7M0 2845 aa8.33□□□□□ -1.08
SMG6-215ENST00000574501 IGKV2-30P06310 120 aa8.31□□□□□ -1.08
SMG6-215ENST00000574501 FAM229AH3BQW9 127 aa8.31□□□□□ -1.08
SMG6-215ENST00000574501 DNAH17Q9UFH2 4485 aa8.3□□□□□ -1.08
SMG6-215ENST00000574501 DYNC2H1Q8NCM8 4307 aaKnown RBP8.3□□□□□ -1.08
SMG6-215ENST00000574501 IGKV2D-30A0A075B6S6 120 aa8.26□□□□□ -1.09
SMG6-215ENST00000574501 VPS13DQ5THJ4 4388 aa8.25□□□□□ -1.09
SMG6-215ENST00000574501 TGP01266 2768 aa8.24□□□□□ -1.09
SMG6-215ENST00000574501 PRKDCP78527 4128 aaKnown RBP8.23□□□□□ -1.09
SMG6-215ENST00000574501 A0A087WTM6 91 aa8.23□□□□□ -1.09
SMG6-215ENST00000574501 SPINK1P00995 79 aa8.22□□□□□ -1.09
SMG6-215ENST00000574501 FBN3Q75N90 2809 aa8.21□□□□□ -1.09
SMG6-215ENST00000574501 KMT2AQ03164 3969 aa8.21□□□□□ -1.1
SMG6-215ENST00000574501 IGLV7-43P04211 117 aa8.19□□□□□ -1.1
SMG6-215ENST00000574501 DNAH2Q9P225 4427 aa8.19□□□□□ -1.1
SMG6-215ENST00000574501 STARD9Q9P2P6 4700 aa8.18□□□□□ -1.1
SMG6-215ENST00000574501 KRTAP16-1A8MUX0 517 aa8.16□□□□□ -1.1
SMG6-215ENST00000574501 SSBP3-AS1Q7Z2R9 100 aa8.16□□□□□ -1.1
SMG6-215ENST00000574501 DNAH6Q9C0G6 4158 aa8.12□□□□□ -1.11
SMG6-215ENST00000574501 Q8N1X5 172 aa8.11□□□□□ -1.11
SMG6-215ENST00000574501 C1orf134Q5TEV5 83 aa8.1□□□□□ -1.11
SMG6-215ENST00000574501 DNAH11Q96DT5 4516 aa8.09□□□□□ -1.11
SMG6-215ENST00000574501 KRTAP13-2Q52LG2 175 aa8.08□□□□□ -1.12
SMG6-215ENST00000574501 H0YAA0 97 aa8.06□□□□□ -1.12
SMG6-215ENST00000574501 Q6ZSA8 131 aa8.05□□□□□ -1.12
SMG6-215ENST00000574501 NUPR2A6NF83 97 aa8.05□□□□□ -1.12
SMG6-215ENST00000574501 A8MUU9 505 aa8.04□□□□□ -1.12
SMG6-215ENST00000574501 KRTAP25-1Q3LHN0 102 aa8.02□□□□□ -1.13
SMG6-215ENST00000574501 LINC00304Q8N9R0 145 aa8.02□□□□□ -1.13
SMG6-215ENST00000574501 LY6G6CO95867 125 aa8.01□□□□□ -1.13
SMG6-215ENST00000574501 TYMSOSQ8TAI1 123 aa8□□□□□ -1.13
SMG6-215ENST00000574501 FLG2Q5D862 2391 aaPredicted RBP8□□□□□ -1.13
SMG6-215ENST00000574501 DNAH5Q8TE73 4624 aa7.97□□□□□ -1.13
SMG6-215ENST00000574501 ROMO1P60602 79 aa7.97□□□□□ -1.13
SMG6-215ENST00000574501 CRIPTQ9P021 101 aa7.96□□□□□ -1.14
SMG6-215ENST00000574501 LRP1BQ9NZR2 4599 aa7.95□□□□□ -1.14
SMG6-215ENST00000574501 A0A1B0GU33 70 aa7.93□□□□□ -1.14
SMG6-215ENST00000574501 VPS13BQ7Z7G8 4022 aa7.89□□□□□ -1.15
SMG6-215ENST00000574501 KRTAP10-2P60368 255 aa7.87□□□□□ -1.15
SMG6-215ENST00000574501 KRTAP1-4P0C5Y4 121 aa7.87□□□□□ -1.15
SMG6-215ENST00000574501 H1FX-AS1Q4G0G2 97 aa7.87□□□□□ -1.15
SMG6-215ENST00000574501 KRTAP3-1Q9BYR8 98 aa7.82□□□□□ -1.16
SMG6-215ENST00000574501 FAT2Q9NYQ8 4349 aa7.79□□□□□ -1.16
SMG6-215ENST00000574501 P0C880 135 aa7.79□□□□□ -1.16
SMG6-215ENST00000574501 PKD1P98161 4303 aa7.76□□□□□ -1.17
SMG6-215ENST00000574501 C9orf92A6NGG3 77 aa7.76□□□□□ -1.17
SMG6-215ENST00000574501 KRTAP10-1P60331 282 aa7.76□□□□□ -1.17
SMG6-215ENST00000574501 K7ERS5 55 aa7.74□□□□□ -1.17
SMG6-215ENST00000574501 COX6B2Q6YFQ2 88 aa7.73□□□□□ -1.17
SMG6-215ENST00000574501 HYDINQ4G0P3 5121 aa7.64□□□□□ -1.19
SMG6-215ENST00000574501 C20orf166-AS1Q96NR2 134 aa7.63□□□□□ -1.19
SMG6-215ENST00000574501 SPINT4Q6UDR6 99 aa7.62□□□□□ -1.19
SMG6-215ENST00000574501 KMT2CQ8NEZ4 4911 aaKnown RBP7.61□□□□□ -1.19
SMG6-215ENST00000574501 A0A0D9SG42 100 aa7.6□□□□□ -1.19
SMG6-215ENST00000574501 DMBT1Q9UGM3 2413 aaPredicted RBP7.6□□□□□ -1.19
SMG6-215ENST00000574501 TPRXLQ17RH7 258 aa7.59□□□□□ -1.19
SMG6-215ENST00000574501 RPL37P61927 97 aaKnown RBP7.57□□□□□ -1.2
SMG6-215ENST00000574501 SACSQ9NZJ4 4579 aa7.57□□□□□ -1.2
SMG6-215ENST00000574501 KRTAP13-4Q3LI77 160 aa7.56□□□□□ -1.2
SMG6-215ENST00000574501 C10orf95Q9H7T3 257 aa7.56□□□□□ -1.2
SMG6-215ENST00000574501 RPS29P62273 56 aaKnown RBP7.54□□□□□ -1.2
SMG6-215ENST00000574501 PKHD1P08F94 4074 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 160.8 ms