RNA–Protein interactions for RNA: ENST00000574408.5

USP43-205, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 3,425 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-205ENST00000574408 SPAG11AQ6PDA7 123 aa6.28□□□□□ -1.4
USP43-205ENST00000574408 hDV103S1A0JD37 113 aa6.27□□□□□ -1.41
USP43-205ENST00000574408 Q6ZSA8 131 aa6.27□□□□□ -1.41
USP43-205ENST00000574408 LINC00472Q9H8W2 130 aa6.27□□□□□ -1.41
USP43-205ENST00000574408 RETNLBQ9BQ08 111 aa6.26□□□□□ -1.41
USP43-205ENST00000574408 PKD1P98161 4303 aa6.25□□□□□ -1.41
USP43-205ENST00000574408 SACSQ9NZJ4 4579 aa6.24□□□□□ -1.41
USP43-205ENST00000574408 CDK2AP2O75956 126 aa6.24□□□□□ -1.41
USP43-205ENST00000574408 A8MWP4 228 aa6.23□□□□□ -1.41
USP43-205ENST00000574408 PRR15Q8IV56 129 aa6.23□□□□□ -1.41
USP43-205ENST00000574408 LRP1BQ9NZR2 4599 aa6.23□□□□□ -1.41
USP43-205ENST00000574408 IGHV6-1A0A0B4J1U7 121 aa6.22□□□□□ -1.41
USP43-205ENST00000574408 NDUFB1O75438 58 aa6.22□□□□□ -1.41
USP43-205ENST00000574408 DMBT1Q9UGM3 2413 aaPredicted RBP6.22□□□□□ -1.41
USP43-205ENST00000574408 Q96NJ1 140 aa6.2□□□□□ -1.42
USP43-205ENST00000574408 LCE6AA0A183 80 aa6.19□□□□□ -1.42
USP43-205ENST00000574408 CD164Q04900 197 aa6.19□□□□□ -1.42
USP43-205ENST00000574408 KRTAP29-1A8MX34 341 aaPredicted RBP6.18□□□□□ -1.42
USP43-205ENST00000574408 H3BS24 57 aa6.16□□□□□ -1.42
USP43-205ENST00000574408 A0A087X002 238 aa6.16□□□□□ -1.42
USP43-205ENST00000574408 SSBP3-AS1Q7Z2R9 100 aa6.16□□□□□ -1.42
USP43-205ENST00000574408 PKHD1P08F94 4074 aa6.16□□□□□ -1.42
USP43-205ENST00000574408 MMP24-AS1A0A0U1RRL7 71 aa6.15□□□□□ -1.42
USP43-205ENST00000574408 COA5Q86WW8 74 aa6.14□□□□□ -1.43
USP43-205ENST00000574408 RBM12B-AS1Q9P1G2 102 aa6.14□□□□□ -1.43
USP43-205ENST00000574408 VPS13BQ7Z7G8 4022 aa6.14□□□□□ -1.43
USP43-205ENST00000574408 FLG2Q5D862 2391 aaPredicted RBP6.14□□□□□ -1.43
USP43-205ENST00000574408 KRTAP13-2Q52LG2 175 aa6.13□□□□□ -1.43
USP43-205ENST00000574408 A0A1B0GVX0 72 aa6.12□□□□□ -1.43
USP43-205ENST00000574408 DYNC1H1Q14204 4646 aaKnown RBP6.12□□□□□ -1.43
USP43-205ENST00000574408 C8orf17Q9NRJ1 99 aa6.12□□□□□ -1.43
USP43-205ENST00000574408 Q5VV11 94 aa6.11□□□□□ -1.43
USP43-205ENST00000574408 KRTAP1-4P0C5Y4 121 aa6.11□□□□□ -1.43
USP43-205ENST00000574408 Q1T7F1 81 aa6.11□□□□□ -1.43
USP43-205ENST00000574408 PRR26Q8N8Z3 221 aa6.1□□□□□ -1.43
USP43-205ENST00000574408 A0A1B0GVY2 172 aa6.09□□□□□ -1.43
USP43-205ENST00000574408 Q8N9P0 234 aaPredicted RBP6.09□□□□□ -1.43
USP43-205ENST00000574408 ZCCHC13Q8WW36 166 aaKnown RBP6.09□□□□□ -1.43
USP43-205ENST00000574408 SMR3BP02814 79 aaPredicted RBP6.09□□□□□ -1.44
USP43-205ENST00000574408 LIMD2Q9BT23 127 aa6.09□□□□□ -1.44
USP43-205ENST00000574408 PLA2G1BP04054 148 aaKnown RBP6.08□□□□□ -1.44
USP43-205ENST00000574408 NOTCH2NLQ7Z3S9 236 aa6.08□□□□□ -1.44
USP43-205ENST00000574408 RYR2Q92736 4967 aa6.07□□□□□ -1.44
USP43-205ENST00000574408 ASB16-AS1Q495Z4 193 aa6.07□□□□□ -1.44
USP43-205ENST00000574408 SPINK1P00995 79 aa6.06□□□□□ -1.44
USP43-205ENST00000574408 KTN1-AS1Q86SY8 53 aa6.05□□□□□ -1.44
USP43-205ENST00000574408 PRAC1Q96KF2 57 aa6.05□□□□□ -1.44
USP43-205ENST00000574408 KMT2CQ8NEZ4 4911 aaKnown RBP6.05□□□□□ -1.44
USP43-205ENST00000574408 MRPL34Q9BQ48 92 aaKnown RBP6.04□□□□□ -1.44
USP43-205ENST00000574408 TYMSOSQ8TAI1 123 aa6.04□□□□□ -1.44
USP43-205ENST00000574408 LCA10Q71F78 164 aa6.03□□□□□ -1.44
USP43-205ENST00000574408 SPINK7P58062 85 aa6.03□□□□□ -1.44
USP43-205ENST00000574408 TP53AIP1Q9HCN2 124 aa6.03□□□□□ -1.44
USP43-205ENST00000574408 FAT1Q14517 4588 aa6.02□□□□□ -1.45
USP43-205ENST00000574408 APOBP04114 4563 aaKnown RBP6.02□□□□□ -1.45
USP43-205ENST00000574408 H3BPC8 53 aa6.02□□□□□ -1.45
USP43-205ENST00000574408 CYP4F30PQ9H0H9 118 aa6.02□□□□□ -1.45
USP43-205ENST00000574408 LOC101927531A0A1B0GV80 90 aa6.01□□□□□ -1.45
USP43-205ENST00000574408 C8orf87E5RJ46 101 aa5.99□□□□□ -1.45
USP43-205ENST00000574408 LINC00313P59037 77 aa5.97□□□□□ -1.45
USP43-205ENST00000574408 IGKV2D-30A0A075B6S6 120 aa5.97□□□□□ -1.45
USP43-205ENST00000574408 IGKV2-30P06310 120 aa5.97□□□□□ -1.45
USP43-205ENST00000574408 LINC00304Q8N9R0 145 aa5.96□□□□□ -1.46
USP43-205ENST00000574408 KRTAP10-4P60372 401 aaPredicted RBP5.96□□□□□ -1.46
USP43-205ENST00000574408 ATP11AUNQ6ZP68 121 aa5.96□□□□□ -1.46
USP43-205ENST00000574408 HRES1P13985 223 aa5.94□□□□□ -1.46
USP43-205ENST00000574408 ADM2Q7Z4H4 148 aa5.94□□□□□ -1.46
USP43-205ENST00000574408 Q5W150 140 aa5.93□□□□□ -1.46
USP43-205ENST00000574408 IGLV7-46A0A075B6I9 117 aa5.92□□□□□ -1.46
USP43-205ENST00000574408 SPANXA2-OT1Q8N9U9 137 aa5.92□□□□□ -1.46
USP43-205ENST00000574408 A0A1B0GU69 56 aa5.91□□□□□ -1.46
USP43-205ENST00000574408 CDC42SE1Q9NRR8 79 aa5.9□□□□□ -1.46
USP43-205ENST00000574408 KRTAP13-3Q3SY46 172 aa5.89□□□□□ -1.47
USP43-205ENST00000574408 KRTAP16-1A8MUX0 517 aa5.89□□□□□ -1.47
USP43-205ENST00000574408 Q75L30 129 aa5.89□□□□□ -1.47
USP43-205ENST00000574408 RPS29P62273 56 aaKnown RBP5.88□□□□□ -1.47
USP43-205ENST00000574408 A6NN06 94 aa5.88□□□□□ -1.47
USP43-205ENST00000574408 C7orf65Q6ZTY9 151 aa5.88□□□□□ -1.47
USP43-205ENST00000574408 RYR3Q15413 4870 aa5.87□□□□□ -1.47
USP43-205ENST00000574408 FAM229AH3BQW9 127 aa5.87□□□□□ -1.47
USP43-205ENST00000574408 ACYP2P14621 99 aa5.86□□□□□ -1.47
USP43-205ENST00000574408 PKHD1L1Q86WI1 4243 aa5.85□□□□□ -1.47
USP43-205ENST00000574408 Q5VSD8 79 aa5.83□□□□□ -1.48
USP43-205ENST00000574408 LINC01558Q9Y6Z2 57 aa5.82□□□□□ -1.48
USP43-205ENST00000574408 HSPG2P98160 4391 aa5.82□□□□□ -1.48
USP43-205ENST00000574408 Q8N1X5 172 aa5.81□□□□□ -1.48
USP43-205ENST00000574408 CRIPTQ9P021 101 aa5.8□□□□□ -1.48
USP43-205ENST00000574408 C9orf92A6NGG3 77 aa5.79□□□□□ -1.48
USP43-205ENST00000574408 RYR1P21817 5038 aa5.78□□□□□ -1.48
USP43-205ENST00000574408 MIR22HGQ0VDD5 57 aa5.78□□□□□ -1.48
USP43-205ENST00000574408 LRP1Q07954 4544 aaKnown RBP5.78□□□□□ -1.48
USP43-205ENST00000574408 CSAG1Q6PB30 78 aa5.74□□□□□ -1.49
USP43-205ENST00000574408 KIAA1109Q2LD37 5005 aa5.74□□□□□ -1.49
USP43-205ENST00000574408 UQCR11O14957 56 aa5.73□□□□□ -1.49
USP43-205ENST00000574408 KRTAP17-1Q9BYP8 105 aa5.73□□□□□ -1.49
USP43-205ENST00000574408 KRTAP10-8P60410 259 aa5.73□□□□□ -1.49
USP43-205ENST00000574408 LINC01554Q52M75 96 aa5.73□□□□□ -1.49
USP43-205ENST00000574408 TNXBP22105 4242 aa5.72□□□□□ -1.49
USP43-205ENST00000574408 A8MUU9 505 aa5.7□□□□□ -1.5
USP43-205ENST00000574408 C20orf166-AS1Q96NR2 134 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms