RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 XP32Q5T750 250 aa6.06□□□□□ -1.44
CHD3-216ENST00000573936 SEC61BP60468 96 aaKnown RBP6.05□□□□□ -1.44
CHD3-216ENST00000573936 A0A1B0GW54 56 aa6.03□□□□□ -1.44
CHD3-216ENST00000573936 CRCT1Q9UGL9 99 aa6.02□□□□□ -1.45
CHD3-216ENST00000573936 Q96NJ1 140 aa6.01□□□□□ -1.45
CHD3-216ENST00000573936 FSIP2Q5CZC0 6907 aa5.99□□□□□ -1.45
CHD3-216ENST00000573936 IGKV4-1P06312 121 aa5.99□□□□□ -1.45
CHD3-216ENST00000573936 LINC00472Q9H8W2 130 aa5.99□□□□□ -1.45
CHD3-216ENST00000573936 SIGMAR1Q99720 223 aa5.98□□□□□ -1.45
CHD3-216ENST00000573936 LINC00846Q9NV44 126 aa5.98□□□□□ -1.45
CHD3-216ENST00000573936 FAM240AA0A1B0GVK7 77 aa5.96□□□□□ -1.46
CHD3-216ENST00000573936 J3KT08 172 aa5.96□□□□□ -1.46
CHD3-216ENST00000573936 RPL37P61927 97 aaKnown RBP5.96□□□□□ -1.46
CHD3-216ENST00000573936 NREPQ16612 68 aa5.95□□□□□ -1.46
CHD3-216ENST00000573936 DEFB116Q30KQ4 102 aa5.95□□□□□ -1.46
CHD3-216ENST00000573936 Q6ZVQ6 151 aa5.95□□□□□ -1.46
CHD3-216ENST00000573936 ACYP1P07311 99 aa5.94□□□□□ -1.46
CHD3-216ENST00000573936 LINC00313P59037 77 aa5.94□□□□□ -1.46
CHD3-216ENST00000573936 PCOTHQ58A44 107 aa5.93□□□□□ -1.46
CHD3-216ENST00000573936 Q75L30 129 aa5.93□□□□□ -1.46
CHD3-216ENST00000573936 UBL5Q9BZL1 73 aa5.93□□□□□ -1.46
CHD3-216ENST00000573936 J3QR89 54 aa5.92□□□□□ -1.46
CHD3-216ENST00000573936 DSCR10P59022 87 aa5.92□□□□□ -1.46
CHD3-216ENST00000573936 C8orf87E5RJ46 101 aa5.91□□□□□ -1.46
CHD3-216ENST00000573936 NDUFB1O75438 58 aa5.91□□□□□ -1.46
CHD3-216ENST00000573936 KRTAP4-8Q9BYQ9 185 aa5.91□□□□□ -1.46
CHD3-216ENST00000573936 IGHV6-1A0A0B4J1U7 121 aa5.9□□□□□ -1.46
CHD3-216ENST00000573936 A0A1B0GVX0 72 aa5.9□□□□□ -1.46
CHD3-216ENST00000573936 ATP11AUNQ6ZP68 121 aa5.9□□□□□ -1.46
CHD3-216ENST00000573936 K7ERU9 68 aa5.89□□□□□ -1.47
CHD3-216ENST00000573936 C20orf166-AS1Q96NR2 134 aa5.89□□□□□ -1.47
CHD3-216ENST00000573936 A8MUU9 505 aa5.88□□□□□ -1.47
CHD3-216ENST00000573936 BPY2O14599 106 aa5.88□□□□□ -1.47
CHD3-216ENST00000573936 A8MWP4 228 aa5.87□□□□□ -1.47
CHD3-216ENST00000573936 KRTAP4-1Q9BYQ7 146 aa5.87□□□□□ -1.47
CHD3-216ENST00000573936 IGKV3D-7A0A0C4DH55 119 aa5.85□□□□□ -1.47
CHD3-216ENST00000573936 KRTAP16-1A8MUX0 517 aa5.85□□□□□ -1.47
CHD3-216ENST00000573936 NOTCH2NLQ7Z3S9 236 aa5.85□□□□□ -1.47
CHD3-216ENST00000573936 K7EQZ3 153 aa5.83□□□□□ -1.48
CHD3-216ENST00000573936 CXCL6P80162 114 aa5.83□□□□□ -1.48
CHD3-216ENST00000573936 LINC00643Q86TS7 51 aa5.83□□□□□ -1.48
CHD3-216ENST00000573936 Q8N9L7 120 aa5.83□□□□□ -1.48
CHD3-216ENST00000573936 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.82□□□□□ -1.48
CHD3-216ENST00000573936 ATP5EP2Q5VTU8 51 aa5.82□□□□□ -1.48
CHD3-216ENST00000573936 PRR15Q8IV56 129 aa5.82□□□□□ -1.48
CHD3-216ENST00000573936 C8orf17Q9NRJ1 99 aa5.81□□□□□ -1.48
CHD3-216ENST00000573936 MMP24-AS1A0A0U1RRL7 71 aa5.78□□□□□ -1.48
CHD3-216ENST00000573936 LCE2CQ5TA81 110 aa5.78□□□□□ -1.48
CHD3-216ENST00000573936 Q8N9P0 234 aaPredicted RBP5.77□□□□□ -1.49
CHD3-216ENST00000573936 TMEM254Q8TBM7 123 aa5.75□□□□□ -1.49
CHD3-216ENST00000573936 hDV103S1A0JD37 113 aa5.74□□□□□ -1.49
CHD3-216ENST00000573936 MT-ATP8P03928 68 aa5.74□□□□□ -1.49
CHD3-216ENST00000573936 HIST1H4AP62805 103 aaKnown RBP5.74□□□□□ -1.49
CHD3-216ENST00000573936 MRPL34Q9BQ48 92 aaKnown RBP5.74□□□□□ -1.49
CHD3-216ENST00000573936 WFDC13Q8IUB5 93 aa5.73□□□□□ -1.49
CHD3-216ENST00000573936 ZCCHC13Q8WW36 166 aaKnown RBP5.73□□□□□ -1.49
CHD3-216ENST00000573936 HCG22E2RYF7 251 aa5.72□□□□□ -1.49
CHD3-216ENST00000573936 CASC2Q6XLA1 102 aa5.72□□□□□ -1.49
CHD3-216ENST00000573936 A0A087WVE0 104 aa5.71□□□□□ -1.5
CHD3-216ENST00000573936 KRTAP9-7A8MTY7 169 aa5.7□□□□□ -1.5
CHD3-216ENST00000573936 KRTAP19-2Q3LHN2 52 aa5.7□□□□□ -1.5
CHD3-216ENST00000573936 COX6B2Q6YFQ2 88 aa5.7□□□□□ -1.5
CHD3-216ENST00000573936 LORP23490 312 aaPredicted RBP5.69□□□□□ -1.5
CHD3-216ENST00000573936 NDUFS5O43920 106 aa5.68□□□□□ -1.5
CHD3-216ENST00000573936 M0R2T5 61 aa5.67□□□□□ -1.5
CHD3-216ENST00000573936 MT1HP80294 61 aa5.67□□□□□ -1.5
CHD3-216ENST00000573936 IMUPQ9GZP8 106 aa5.67□□□□□ -1.5
CHD3-216ENST00000573936 FLGP20930 4061 aaPredicted RBP5.66□□□□□ -1.5
CHD3-216ENST00000573936 RBM12B-AS1Q9P1G2 102 aa5.65□□□□□ -1.5
CHD3-216ENST00000573936 SPINK7P58062 85 aa5.63□□□□□ -1.51
CHD3-216ENST00000573936 LCE3BQ5TA77 95 aa5.62□□□□□ -1.51
CHD3-216ENST00000573936 HRES1P13985 223 aa5.61□□□□□ -1.51
CHD3-216ENST00000573936 FAM236DA0A1B0GTK5 79 aa5.6□□□□□ -1.51
CHD3-216ENST00000573936 FAM236CP0DP71 79 aa5.6□□□□□ -1.51
CHD3-216ENST00000573936 KRTAP10-6P60371 365 aaPredicted RBP5.6□□□□□ -1.51
CHD3-216ENST00000573936 FAM236AA0A1B0GUQ0 79 aa5.59□□□□□ -1.51
CHD3-216ENST00000573936 FAM236BA0A1B0GV22 79 aa5.59□□□□□ -1.51
CHD3-216ENST00000573936 MPLKIPQ8TAP9 179 aa5.59□□□□□ -1.51
CHD3-216ENST00000573936 Q5W150 140 aa5.58□□□□□ -1.52
CHD3-216ENST00000573936 TP53AIP1Q9HCN2 124 aa5.58□□□□□ -1.52
CHD3-216ENST00000573936 OCR1Q9BZK8 76 aa5.56□□□□□ -1.52
CHD3-216ENST00000573936 SCGB1A1P11684 91 aa5.55□□□□□ -1.52
CHD3-216ENST00000573936 C7orf65Q6ZTY9 151 aa5.55□□□□□ -1.52
CHD3-216ENST00000573936 UQCRQO14949 82 aa5.54□□□□□ -1.52
CHD3-216ENST00000573936 IGKV2D-30A0A075B6S6 120 aa5.53□□□□□ -1.52
CHD3-216ENST00000573936 IGKV2-30P06310 120 aa5.53□□□□□ -1.52
CHD3-216ENST00000573936 KRTAP4-8A0A0G2JLE6 195 aa5.52□□□□□ -1.53
CHD3-216ENST00000573936 TRAV22A0A0B4J277 110 aa5.51□□□□□ -1.53
CHD3-216ENST00000573936 ATOX1O00244 68 aa5.51□□□□□ -1.53
CHD3-216ENST00000573936 KRTAP9-9Q9BYP9 154 aa5.5□□□□□ -1.53
CHD3-216ENST00000573936 KRTAP9-4Q9BYQ2 154 aa5.5□□□□□ -1.53
CHD3-216ENST00000573936 H0Y9P7 68 aa5.49□□□□□ -1.53
CHD3-216ENST00000573936 SMIM20Q8N5G0 67 aa5.49□□□□□ -1.53
CHD3-216ENST00000573936 TRAV7A0A075B6U4 112 aa5.48□□□□□ -1.53
CHD3-216ENST00000573936 C5orf47Q569G3 176 aa5.46□□□□□ -1.54
CHD3-216ENST00000573936 KRTAP4-12Q9BQ66 201 aa5.45□□□□□ -1.54
CHD3-216ENST00000573936 MP68P56378 58 aa5.44□□□□□ -1.54
CHD3-216ENST00000573936 SERP2Q8N6R1 65 aa5.44□□□□□ -1.54
CHD3-216ENST00000573936 USH2AO75445 5202 aa5.44□□□□□ -1.54
CHD3-216ENST00000573936 LOC101927531A0A1B0GV80 90 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 125.3 ms