RNA–Protein interactions for RNA: ENST00000573212.5

NPLOC4-211, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-211ENST00000573212 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.92□□□□□ -1.78
NPLOC4-211ENST00000573212 HIST1H2BHQ93079 126 aa3.92□□□□□ -1.78
NPLOC4-211ENST00000573212 HIST1H2BNQ99877 126 aa3.92□□□□□ -1.78
NPLOC4-211ENST00000573212 HIST1H2BMQ99879 126 aa3.92□□□□□ -1.78
NPLOC4-211ENST00000573212 SNHG12Q9BXW3 62 aa3.92□□□□□ -1.78
NPLOC4-211ENST00000573212 A0A087WSZ3 146 aa3.9□□□□□ -1.79
NPLOC4-211ENST00000573212 LINC00313P59037 77 aa3.9□□□□□ -1.79
NPLOC4-211ENST00000573212 KRTDAPP60985 99 aa3.88□□□□□ -1.79
NPLOC4-211ENST00000573212 BVES-AS1Q5T3Y7 98 aa3.87□□□□□ -1.79
NPLOC4-211ENST00000573212 CAMK2N1Q7Z7J9 78 aa3.87□□□□□ -1.79
NPLOC4-211ENST00000573212 ATOH7Q8N100 152 aa3.87□□□□□ -1.79
NPLOC4-211ENST00000573212 A8MWP4 228 aa3.86□□□□□ -1.79
NPLOC4-211ENST00000573212 A0A1W2PNM2 257 aa3.85□□□□□ -1.79
NPLOC4-211ENST00000573212 H3BMG7 143 aa3.83□□□□□ -1.8
NPLOC4-211ENST00000573212 IGKV4-1P06312 121 aa3.83□□□□□ -1.8
NPLOC4-211ENST00000573212 C12orf57Q99622 126 aa3.83□□□□□ -1.8
NPLOC4-211ENST00000573212 SIGMAR1Q99720 223 aa3.83□□□□□ -1.8
NPLOC4-211ENST00000573212 LINC00472Q9H8W2 130 aa3.83□□□□□ -1.8
NPLOC4-211ENST00000573212 SPINK7P58062 85 aa3.82□□□□□ -1.8
NPLOC4-211ENST00000573212 H0YGX0 51 aa3.81□□□□□ -1.8
NPLOC4-211ENST00000573212 KRTAP2-2Q9BYT5 123 aa3.81□□□□□ -1.8
NPLOC4-211ENST00000573212 MUC12Q9UKN1 5478 aa3.81□□□□□ -1.8
NPLOC4-211ENST00000573212 TRBV7-4A0A0J9YYF1 115 aa3.8□□□□□ -1.8
NPLOC4-211ENST00000573212 DEFB116Q30KQ4 102 aa3.8□□□□□ -1.8
NPLOC4-211ENST00000573212 KRTAP20-1Q3LI63 56 aa3.8□□□□□ -1.8
NPLOC4-211ENST00000573212 NEBP20929 6669 aa3.8□□□□□ -1.8
NPLOC4-211ENST00000573212 IGHV6-1A0A0B4J1U7 121 aa3.79□□□□□ -1.8
NPLOC4-211ENST00000573212 SNCGO76070 127 aa3.79□□□□□ -1.8
NPLOC4-211ENST00000573212 ZCCHC13Q8WW36 166 aaKnown RBP3.79□□□□□ -1.8
NPLOC4-211ENST00000573212 A0A1B0GX51 115 aa3.78□□□□□ -1.8
NPLOC4-211ENST00000573212 RAB37Q96AX2 223 aa3.78□□□□□ -1.8
NPLOC4-211ENST00000573212 C8orf87E5RJ46 101 aa3.77□□□□□ -1.81
NPLOC4-211ENST00000573212 FABP2P12104 132 aa3.77□□□□□ -1.81
NPLOC4-211ENST00000573212 ANKRD29Q8N6D5 301 aa3.77□□□□□ -1.81
NPLOC4-211ENST00000573212 C5orf47Q569G3 176 aa3.76□□□□□ -1.81
NPLOC4-211ENST00000573212 HIST3H2BBQ8N257 126 aa3.76□□□□□ -1.81
NPLOC4-211ENST00000573212 HIST1H2BLQ99880 126 aa3.76□□□□□ -1.81
NPLOC4-211ENST00000573212 SMIM26A0A096LP01 95 aa3.75□□□□□ -1.81
NPLOC4-211ENST00000573212 A0A1B0GVX0 72 aa3.75□□□□□ -1.81
NPLOC4-211ENST00000573212 LCE1FQ5T754 118 aa3.75□□□□□ -1.81
NPLOC4-211ENST00000573212 A0A0B4J2C4 111 aa3.74□□□□□ -1.81
NPLOC4-211ENST00000573212 FAM240AA0A1B0GVK7 77 aa3.74□□□□□ -1.81
NPLOC4-211ENST00000573212 WFDC13Q8IUB5 93 aa3.74□□□□□ -1.81
NPLOC4-211ENST00000573212 KRTAP5-9P26371 169 aa3.73□□□□□ -1.81
NPLOC4-211ENST00000573212 KRTAP5-3Q6L8H2 238 aa3.73□□□□□ -1.81
NPLOC4-211ENST00000573212 PSPHP1O15172 72 aa3.72□□□□□ -1.81
NPLOC4-211ENST00000573212 DLEU1O43261 78 aa3.72□□□□□ -1.81
NPLOC4-211ENST00000573212 CCKP06307 115 aa3.72□□□□□ -1.81
NPLOC4-211ENST00000573212 COX8AP10176 69 aa3.72□□□□□ -1.81
NPLOC4-211ENST00000573212 A6NN06 94 aa3.71□□□□□ -1.82
NPLOC4-211ENST00000573212 TRACP01848 142 aa3.71□□□□□ -1.82
NPLOC4-211ENST00000573212 MT1BP07438 61 aa3.71□□□□□ -1.82
NPLOC4-211ENST00000573212 H1FX-AS1Q4G0G2 97 aa3.71□□□□□ -1.82
NPLOC4-211ENST00000573212 H3BQ85 93 aa3.7□□□□□ -1.82
NPLOC4-211ENST00000573212 TMEM256-PLSCR3K7ERE1 68 aa3.69□□□□□ -1.82
NPLOC4-211ENST00000573212 ORMDL1Q9P0S3 153 aa3.69□□□□□ -1.82
NPLOC4-211ENST00000573212 HIGD1BQ9P298 99 aa3.69□□□□□ -1.82
NPLOC4-211ENST00000573212 A0A1B0GV72 72 aa3.68□□□□□ -1.82
NPLOC4-211ENST00000573212 S100A1P23297 94 aa3.68□□□□□ -1.82
NPLOC4-211ENST00000573212 PRO1854Q9UHT4 67 aa3.68□□□□□ -1.82
NPLOC4-211ENST00000573212 J3KT08 172 aa3.67□□□□□ -1.82
NPLOC4-211ENST00000573212 KRTAP2-3P0C7H8 128 aa3.67□□□□□ -1.82
NPLOC4-211ENST00000573212 KRTAP10-5P60370 271 aa3.67□□□□□ -1.82
NPLOC4-211ENST00000573212 KRTAP19-8Q3LI54 63 aa3.67□□□□□ -1.82
NPLOC4-211ENST00000573212 KRTAP2-4Q9BYR9 128 aa3.67□□□□□ -1.82
NPLOC4-211ENST00000573212 KMT2DO14686 5537 aa3.66□□□□□ -1.82
NPLOC4-211ENST00000573212 C2orf91Q6ZV80 131 aa3.66□□□□□ -1.82
NPLOC4-211ENST00000573212 C8orf17Q9NRJ1 99 aa3.66□□□□□ -1.82
NPLOC4-211ENST00000573212 IGKV3D-7A0A0C4DH55 119 aa3.65□□□□□ -1.83
NPLOC4-211ENST00000573212 NDUFS5O43920 106 aa3.65□□□□□ -1.83
NPLOC4-211ENST00000573212 S100A2P29034 98 aa3.65□□□□□ -1.83
NPLOC4-211ENST00000573212 C14orf144Q96I85 54 aa3.65□□□□□ -1.83
NPLOC4-211ENST00000573212 NDUFB1O75438 58 aa3.64□□□□□ -1.83
NPLOC4-211ENST00000573212 DNAL4O96015 105 aa3.64□□□□□ -1.83
NPLOC4-211ENST00000573212 Q6ZQT0 140 aa3.64□□□□□ -1.83
NPLOC4-211ENST00000573212 BPY2O14599 106 aa3.63□□□□□ -1.83
NPLOC4-211ENST00000573212 S100A6P06703 90 aa3.63□□□□□ -1.83
NPLOC4-211ENST00000573212 FXYD2P54710 66 aa3.63□□□□□ -1.83
NPLOC4-211ENST00000573212 RBM3P98179 157 aaKnown RBP3.63□□□□□ -1.83
NPLOC4-211ENST00000573212 LYRM7Q5U5X0 104 aa3.63□□□□□ -1.83
NPLOC4-211ENST00000573212 Q5VV11 94 aa3.63□□□□□ -1.83
NPLOC4-211ENST00000573212 VPS25Q9BRG1 176 aa3.63□□□□□ -1.83
NPLOC4-211ENST00000573212 SPRR2GQ9BYE4 73 aa3.63□□□□□ -1.83
NPLOC4-211ENST00000573212 MDN1Q9NU22 5596 aa3.63□□□□□ -1.83
NPLOC4-211ENST00000573212 PSMB2P49721 201 aa3.62□□□□□ -1.83
NPLOC4-211ENST00000573212 PRO0628Q9UI54 55 aa3.61□□□□□ -1.83
NPLOC4-211ENST00000573212 DSCR8Q96T75 97 aa3.6□□□□□ -1.83
NPLOC4-211ENST00000573212 SPATA45Q537H7 98 aa3.59□□□□□ -1.83
NPLOC4-211ENST00000573212 MRPL34Q9BQ48 92 aaKnown RBP3.59□□□□□ -1.83
NPLOC4-211ENST00000573212 A0A1B0GW54 56 aa3.58□□□□□ -1.84
NPLOC4-211ENST00000573212 C9JAW5 83 aa3.58□□□□□ -1.84
NPLOC4-211ENST00000573212 COX6CP09669 75 aa3.58□□□□□ -1.84
NPLOC4-211ENST00000573212 PYY3Q5JQD4 70 aa3.58□□□□□ -1.84
NPLOC4-211ENST00000573212 PRR15Q8IV56 129 aa3.58□□□□□ -1.84
NPLOC4-211ENST00000573212 TMEM254Q8TBM7 123 aa3.58□□□□□ -1.84
NPLOC4-211ENST00000573212 Q5W150 140 aa3.57□□□□□ -1.84
NPLOC4-211ENST00000573212 MMP24-AS1A0A0U1RRL7 71 aa3.56□□□□□ -1.84
NPLOC4-211ENST00000573212 FAM236AA0A1B0GUQ0 79 aa3.55□□□□□ -1.84
NPLOC4-211ENST00000573212 FAM236BA0A1B0GV22 79 aa3.55□□□□□ -1.84
NPLOC4-211ENST00000573212 BAALC-AS2P0C853 105 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms