RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 SS18L2Q9UHA2 77 aa3.95□□□□□ -1.78
NUP88-205ENST00000572809 NDUFAF8A1L188 74 aa3.94□□□□□ -1.78
NUP88-205ENST00000572809 COX6CP09669 75 aa3.94□□□□□ -1.78
NUP88-205ENST00000572809 PSMB2P49721 201 aa3.94□□□□□ -1.78
NUP88-205ENST00000572809 KRTAP19-2Q3LHN2 52 aa3.94□□□□□ -1.78
NUP88-205ENST00000572809 OBSCN-AS1Q96MR7 158 aa3.94□□□□□ -1.78
NUP88-205ENST00000572809 A0A087WSZ3 146 aa3.93□□□□□ -1.78
NUP88-205ENST00000572809 H3BQ85 93 aa3.93□□□□□ -1.78
NUP88-205ENST00000572809 DNAL4O96015 105 aa3.93□□□□□ -1.78
NUP88-205ENST00000572809 MT3P25713 68 aa3.93□□□□□ -1.78
NUP88-205ENST00000572809 ATP11AUNQ6ZP68 121 aa3.93□□□□□ -1.78
NUP88-205ENST00000572809 OCR1Q9BZK8 76 aa3.93□□□□□ -1.78
NUP88-205ENST00000572809 UQCR10Q9UDW1 63 aa3.93□□□□□ -1.78
NUP88-205ENST00000572809 TMEM256-PLSCR3K7ERE1 68 aa3.92□□□□□ -1.78
NUP88-205ENST00000572809 K7ERJ3 54 aa3.92□□□□□ -1.78
NUP88-205ENST00000572809 KRTAP5-9P26371 169 aa3.92□□□□□ -1.78
NUP88-205ENST00000572809 KRTAP5-4Q6L8H1 288 aa3.92□□□□□ -1.78
NUP88-205ENST00000572809 Q96NJ1 140 aa3.92□□□□□ -1.78
NUP88-205ENST00000572809 ORMDL1Q9P0S3 153 aa3.92□□□□□ -1.78
NUP88-205ENST00000572809 A0A1W2PNM2 257 aa3.91□□□□□ -1.78
NUP88-205ENST00000572809 MT1HP80294 61 aa3.91□□□□□ -1.78
NUP88-205ENST00000572809 ANKRD29Q8N6D5 301 aa3.91□□□□□ -1.78
NUP88-205ENST00000572809 KRTAP4-4Q9BYR3 166 aa3.91□□□□□ -1.78
NUP88-205ENST00000572809 SCGB1C2P0DMR2 95 aa3.9□□□□□ -1.79
NUP88-205ENST00000572809 TRBV7-4A0A0J9YYF1 115 aa3.89□□□□□ -1.79
NUP88-205ENST00000572809 COX6B2Q6YFQ2 88 aa3.89□□□□□ -1.79
NUP88-205ENST00000572809 A0A1B0GV72 72 aa3.88□□□□□ -1.79
NUP88-205ENST00000572809 TRACP01848 142 aa3.88□□□□□ -1.79
NUP88-205ENST00000572809 A8MUU9 505 aa3.87□□□□□ -1.79
NUP88-205ENST00000572809 M0R2T5 61 aa3.87□□□□□ -1.79
NUP88-205ENST00000572809 CCKP06307 115 aa3.87□□□□□ -1.79
NUP88-205ENST00000572809 IGKV4-1P06312 121 aa3.87□□□□□ -1.79
NUP88-205ENST00000572809 DSCR10P59022 87 aa3.87□□□□□ -1.79
NUP88-205ENST00000572809 C20orf166-AS1Q96NR2 134 aa3.87□□□□□ -1.79
NUP88-205ENST00000572809 LINC00313P59037 77 aa3.86□□□□□ -1.79
NUP88-205ENST00000572809 RBM3P98179 157 aaKnown RBP3.86□□□□□ -1.79
NUP88-205ENST00000572809 SIGMAR1Q99720 223 aa3.86□□□□□ -1.79
NUP88-205ENST00000572809 BAALC-AS2P0C853 105 aa3.85□□□□□ -1.79
NUP88-205ENST00000572809 DEFB116Q30KQ4 102 aa3.85□□□□□ -1.79
NUP88-205ENST00000572809 LINC00472Q9H8W2 130 aa3.85□□□□□ -1.79
NUP88-205ENST00000572809 DSCR8Q96T75 97 aa3.84□□□□□ -1.79
NUP88-205ENST00000572809 VPS25Q9BRG1 176 aa3.84□□□□□ -1.79
NUP88-205ENST00000572809 C9JAW5 83 aa3.82□□□□□ -1.8
NUP88-205ENST00000572809 M0R143 59 aa3.82□□□□□ -1.8
NUP88-205ENST00000572809 TRBV20-1A0A075B6N2 111 aa3.81□□□□□ -1.8
NUP88-205ENST00000572809 IGHV6-1A0A0B4J1U7 121 aa3.81□□□□□ -1.8
NUP88-205ENST00000572809 KRTAP16-1A8MUX0 517 aa3.81□□□□□ -1.8
NUP88-205ENST00000572809 ATXN8Q156A1 80 aa3.81□□□□□ -1.8
NUP88-205ENST00000572809 NAA38Q9BRA0 125 aaKnown RBP3.8□□□□□ -1.8
NUP88-205ENST00000572809 JMJD7-PLA2G4BH0Y9G9 81 aa3.79□□□□□ -1.8
NUP88-205ENST00000572809 Q6ZQT0 140 aa3.79□□□□□ -1.8
NUP88-205ENST00000572809 A0A1B0GVX0 72 aa3.78□□□□□ -1.8
NUP88-205ENST00000572809 C8orf87E5RJ46 101 aa3.78□□□□□ -1.8
NUP88-205ENST00000572809 J3KT08 172 aa3.78□□□□□ -1.8
NUP88-205ENST00000572809 SMIM6P0DI80 62 aa3.78□□□□□ -1.8
NUP88-205ENST00000572809 A0A1B0GW54 56 aa3.77□□□□□ -1.81
NUP88-205ENST00000572809 CRCT1Q9UGL9 99 aa3.77□□□□□ -1.81
NUP88-205ENST00000572809 LOC110117498A0A087WWA1 95 aa3.76□□□□□ -1.81
NUP88-205ENST00000572809 TSTD3H0UI37 97 aa3.76□□□□□ -1.81
NUP88-205ENST00000572809 NDUFB1O75438 58 aa3.76□□□□□ -1.81
NUP88-205ENST00000572809 PDE6GP18545 87 aa3.76□□□□□ -1.81
NUP88-205ENST00000572809 LYRM7Q5U5X0 104 aa3.76□□□□□ -1.81
NUP88-205ENST00000572809 FLGP20930 4061 aaPredicted RBP3.75□□□□□ -1.81
NUP88-205ENST00000572809 BATFQ16520 125 aa3.75□□□□□ -1.81
NUP88-205ENST00000572809 FAM236DA0A1B0GTK5 79 aa3.74□□□□□ -1.81
NUP88-205ENST00000572809 FAM236CP0DP71 79 aa3.74□□□□□ -1.81
NUP88-205ENST00000572809 C14orf132Q9NPU4 83 aa3.74□□□□□ -1.81
NUP88-205ENST00000572809 RBM12B-AS1Q9P1G2 102 aa3.74□□□□□ -1.81
NUP88-205ENST00000572809 PCP4L1A6NKN8 68 aa3.73□□□□□ -1.81
NUP88-205ENST00000572809 HRES1P13985 223 aa3.73□□□□□ -1.81
NUP88-205ENST00000572809 KRTAP10-5P60370 271 aa3.73□□□□□ -1.81
NUP88-205ENST00000572809 NREPQ16612 68 aa3.73□□□□□ -1.81
NUP88-205ENST00000572809 A8MWP4 228 aa3.72□□□□□ -1.81
NUP88-205ENST00000572809 MTURNQ8N3F0 131 aa3.72□□□□□ -1.81
NUP88-205ENST00000572809 ZCCHC13Q8WW36 166 aaKnown RBP3.72□□□□□ -1.81
NUP88-205ENST00000572809 C8orf17Q9NRJ1 99 aa3.72□□□□□ -1.81
NUP88-205ENST00000572809 IGKV3D-7A0A0C4DH55 119 aa3.71□□□□□ -1.82
NUP88-205ENST00000572809 LOC105371267A0A1B0GV96 52 aa3.71□□□□□ -1.82
NUP88-205ENST00000572809 FSIP2Q5CZC0 6907 aa3.7□□□□□ -1.82
NUP88-205ENST00000572809 A0A1W2PPM0 123 aa3.7□□□□□ -1.82
NUP88-205ENST00000572809 TAX1BP3O14907 124 aa3.7□□□□□ -1.82
NUP88-205ENST00000572809 SPINK7P58062 85 aa3.7□□□□□ -1.82
NUP88-205ENST00000572809 PRR15Q8IV56 129 aa3.7□□□□□ -1.82
NUP88-205ENST00000572809 H3BT86 120 aa3.69□□□□□ -1.82
NUP88-205ENST00000572809 KRTAP9-6A8MVA2 160 aa3.66□□□□□ -1.82
NUP88-205ENST00000572809 TMEM254Q8TBM7 123 aa3.66□□□□□ -1.82
NUP88-205ENST00000572809 MRPL34Q9BQ48 92 aaKnown RBP3.66□□□□□ -1.82
NUP88-205ENST00000572809 MMP24-AS1A0A0U1RRL7 71 aa3.65□□□□□ -1.83
NUP88-205ENST00000572809 K7EQZ3 153 aa3.65□□□□□ -1.83
NUP88-205ENST00000572809 hDV103S1A0JD37 113 aa3.64□□□□□ -1.83
NUP88-205ENST00000572809 BPY2O14599 106 aa3.64□□□□□ -1.83
NUP88-205ENST00000572809 NDUFS5O43920 106 aa3.64□□□□□ -1.83
NUP88-205ENST00000572809 MT2AP02795 61 aa3.64□□□□□ -1.83
NUP88-205ENST00000572809 CXCL6P80162 114 aa3.64□□□□□ -1.83
NUP88-205ENST00000572809 SPCS1Q9Y6A9 102 aa3.64□□□□□ -1.83
NUP88-205ENST00000572809 WFDC13Q8IUB5 93 aa3.63□□□□□ -1.83
NUP88-205ENST00000572809 KRTAP10-10P60014 251 aa3.62□□□□□ -1.83
NUP88-205ENST00000572809 MT1FP04733 61 aa3.61□□□□□ -1.83
NUP88-205ENST00000572809 COL5A1-AS1Q5SY13 56 aa3.61□□□□□ -1.83
NUP88-205ENST00000572809 Q5W150 140 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms