RNA–Protein interactions for RNA: ENST00000571995.5

RAB40B-206, Transcript of RAB40B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40B, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-206ENST00000571995 Q8N9P0 234 aaPredicted RBP9.57□□□□□ -0.88
RAB40B-206ENST00000571995 SVIPQ8NHG7 77 aa9.56□□□□□ -0.88
RAB40B-206ENST00000571995 SSBP3-AS1Q7Z2R9 100 aa9.55□□□□□ -0.88
RAB40B-206ENST00000571995 CD164Q04900 197 aa9.54□□□□□ -0.88
RAB40B-206ENST00000571995 PRKDCP78527 4128 aaKnown RBP9.53□□□□□ -0.88
RAB40B-206ENST00000571995 LIMD2Q9BT23 127 aa9.52□□□□□ -0.89
RAB40B-206ENST00000571995 CMYA5Q8N3K9 4069 aa9.52□□□□□ -0.89
RAB40B-206ENST00000571995 PRO0628Q9UI54 55 aa9.51□□□□□ -0.89
RAB40B-206ENST00000571995 LINC00304Q8N9R0 145 aa9.5□□□□□ -0.89
RAB40B-206ENST00000571995 C7orf65Q6ZTY9 151 aa9.49□□□□□ -0.89
RAB40B-206ENST00000571995 Q8N1X5 172 aa9.49□□□□□ -0.89
RAB40B-206ENST00000571995 Q5W150 140 aa9.49□□□□□ -0.89
RAB40B-206ENST00000571995 ZCCHC13Q8WW36 166 aaKnown RBP9.48□□□□□ -0.89
RAB40B-206ENST00000571995 PMAIP1Q13794 54 aa9.47□□□□□ -0.89
RAB40B-206ENST00000571995 DNAH7Q8WXX0 4024 aa9.47□□□□□ -0.89
RAB40B-206ENST00000571995 STARD9Q9P2P6 4700 aa9.46□□□□□ -0.89
RAB40B-206ENST00000571995 LINC00483Q53H64 154 aa9.46□□□□□ -0.9
RAB40B-206ENST00000571995 C1orf195Q5TG92 126 aa9.45□□□□□ -0.9
RAB40B-206ENST00000571995 H3BPC8 53 aa9.45□□□□□ -0.9
RAB40B-206ENST00000571995 V9GYY9 64 aa9.43□□□□□ -0.9
RAB40B-206ENST00000571995 A8MU10 97 aa9.43□□□□□ -0.9
RAB40B-206ENST00000571995 KRTAP13-2Q52LG2 175 aa9.42□□□□□ -0.9
RAB40B-206ENST00000571995 KMT2AQ03164 3969 aa9.41□□□□□ -0.9
RAB40B-206ENST00000571995 FAM229AH3BQW9 127 aa9.4□□□□□ -0.9
RAB40B-206ENST00000571995 LOC101927531A0A1B0GV80 90 aa9.4□□□□□ -0.91
RAB40B-206ENST00000571995 HRES1P13985 223 aa9.37□□□□□ -0.91
RAB40B-206ENST00000571995 ACYP2P14621 99 aa9.37□□□□□ -0.91
RAB40B-206ENST00000571995 CYP4F30PQ9H0H9 118 aa9.36□□□□□ -0.91
RAB40B-206ENST00000571995 IGLV7-46A0A075B6I9 117 aa9.35□□□□□ -0.91
RAB40B-206ENST00000571995 C8orf87E5RJ46 101 aa9.35□□□□□ -0.91
RAB40B-206ENST00000571995 DNAH1Q9P2D7 4330 aa9.35□□□□□ -0.91
RAB40B-206ENST00000571995 LCE6AA0A183 80 aa9.34□□□□□ -0.91
RAB40B-206ENST00000571995 SEC61GP60059 68 aa9.32□□□□□ -0.92
RAB40B-206ENST00000571995 DNAH11Q96DT5 4516 aa9.32□□□□□ -0.92
RAB40B-206ENST00000571995 SPANXA2-OT1Q8N9U9 137 aa9.32□□□□□ -0.92
RAB40B-206ENST00000571995 A0A1B0GU69 56 aa9.31□□□□□ -0.92
RAB40B-206ENST00000571995 Q1T7F1 81 aa9.28□□□□□ -0.92
RAB40B-206ENST00000571995 DNAH3Q8TD57 4116 aa9.27□□□□□ -0.93
RAB40B-206ENST00000571995 Q5VV11 94 aa9.26□□□□□ -0.93
RAB40B-206ENST00000571995 FRAS1Q86XX4 4008 aa9.21□□□□□ -0.93
RAB40B-206ENST00000571995 SPINK7P58062 85 aa9.2□□□□□ -0.94
RAB40B-206ENST00000571995 KRTAP1-4P0C5Y4 121 aa9.16□□□□□ -0.94
RAB40B-206ENST00000571995 ATP11AUNQ6ZP68 121 aa9.15□□□□□ -0.95
RAB40B-206ENST00000571995 VPS13DQ5THJ4 4388 aa9.14□□□□□ -0.95
RAB40B-206ENST00000571995 DNAH8Q96JB1 4490 aa9.13□□□□□ -0.95
RAB40B-206ENST00000571995 Q6ZSA8 131 aa9.12□□□□□ -0.95
RAB40B-206ENST00000571995 Q5VSD8 79 aa9.11□□□□□ -0.95
RAB40B-206ENST00000571995 DNAH6Q9C0G6 4158 aa9.1□□□□□ -0.95
RAB40B-206ENST00000571995 LRP1BQ9NZR2 4599 aa9.09□□□□□ -0.95
RAB40B-206ENST00000571995 DNAH2Q9P225 4427 aa9.08□□□□□ -0.96
RAB40B-206ENST00000571995 LCA10Q71F78 164 aa9.06□□□□□ -0.96
RAB40B-206ENST00000571995 FAT1Q14517 4588 aa9.06□□□□□ -0.96
RAB40B-206ENST00000571995 DNAH17Q9UFH2 4485 aa9.05□□□□□ -0.96
RAB40B-206ENST00000571995 ASB16-AS1Q495Z4 193 aa9.03□□□□□ -0.96
RAB40B-206ENST00000571995 LINC01558Q9Y6Z2 57 aa9.02□□□□□ -0.97
RAB40B-206ENST00000571995 Q75L30 129 aa9□□□□□ -0.97
RAB40B-206ENST00000571995 DNAH5Q8TE73 4624 aa8.97□□□□□ -0.97
RAB40B-206ENST00000571995 HYDINQ4G0P3 5121 aa8.97□□□□□ -0.97
RAB40B-206ENST00000571995 DMAC1Q96GE9 116 aa8.97□□□□□ -0.97
RAB40B-206ENST00000571995 MIR22HGQ0VDD5 57 aa8.97□□□□□ -0.97
RAB40B-206ENST00000571995 UQCR11O14957 56 aa8.96□□□□□ -0.98
RAB40B-206ENST00000571995 A0A0D9SG42 100 aa8.95□□□□□ -0.98
RAB40B-206ENST00000571995 CDC42SE1Q9NRR8 79 aa8.95□□□□□ -0.98
RAB40B-206ENST00000571995 HECTD4Q9Y4D8 3996 aa8.93□□□□□ -0.98
RAB40B-206ENST00000571995 PRAC1Q96KF2 57 aa8.92□□□□□ -0.98
RAB40B-206ENST00000571995 J3QL48 77 aa8.89□□□□□ -0.99
RAB40B-206ENST00000571995 KRTAP16-1A8MUX0 517 aa8.89□□□□□ -0.99
RAB40B-206ENST00000571995 DYNC2H1Q8NCM8 4307 aaKnown RBP8.85□□□□□ -0.99
RAB40B-206ENST00000571995 KRTAP13-3Q3SY46 172 aa8.84□□□□□ -0.99
RAB40B-206ENST00000571995 PKHD1P08F94 4074 aa8.84□□□□□ -0.99
RAB40B-206ENST00000571995 CRIPTQ9P021 101 aa8.83□□□□□ -1
RAB40B-206ENST00000571995 MYCBP2O75592 4640 aa8.82□□□□□ -1
RAB40B-206ENST00000571995 VPS13BQ7Z7G8 4022 aa8.81□□□□□ -1
RAB40B-206ENST00000571995 K7ERS5 55 aa8.8□□□□□ -1
RAB40B-206ENST00000571995 SPATA8Q6RVD6 105 aa8.8□□□□□ -1
RAB40B-206ENST00000571995 LINC01554Q52M75 96 aa8.79□□□□□ -1
RAB40B-206ENST00000571995 ADM2Q7Z4H4 148 aa8.78□□□□□ -1
RAB40B-206ENST00000571995 KTN1-AS1Q86SY8 53 aa8.78□□□□□ -1
RAB40B-206ENST00000571995 KRTAP21-3Q3LHN1 58 aa8.76□□□□□ -1.01
RAB40B-206ENST00000571995 DYNC1H1Q14204 4646 aaKnown RBP8.75□□□□□ -1.01
RAB40B-206ENST00000571995 A0A1B0GU33 70 aa8.73□□□□□ -1.01
RAB40B-206ENST00000571995 A0A1B0GVY2 172 aa8.72□□□□□ -1.01
RAB40B-206ENST00000571995 SPINT4Q6UDR6 99 aa8.66□□□□□ -1.02
RAB40B-206ENST00000571995 RBM12B-AS1Q9P1G2 102 aa8.66□□□□□ -1.02
RAB40B-206ENST00000571995 FAT3Q8TDW7 4589 aa8.64□□□□□ -1.03
RAB40B-206ENST00000571995 KIAA1109Q2LD37 5005 aa8.64□□□□□ -1.03
RAB40B-206ENST00000571995 LRP1Q07954 4544 aaKnown RBP8.64□□□□□ -1.03
RAB40B-206ENST00000571995 KMT2CQ8NEZ4 4911 aaKnown RBP8.64□□□□□ -1.03
RAB40B-206ENST00000571995 COX6B2Q6YFQ2 88 aa8.63□□□□□ -1.03
RAB40B-206ENST00000571995 A8MUU9 505 aa8.62□□□□□ -1.03
RAB40B-206ENST00000571995 A6NN06 94 aa8.61□□□□□ -1.03
RAB40B-206ENST00000571995 C20orf166-AS1Q96NR2 134 aa8.59□□□□□ -1.03
RAB40B-206ENST00000571995 FAT2Q9NYQ8 4349 aa8.59□□□□□ -1.03
RAB40B-206ENST00000571995 SACSQ9NZJ4 4579 aa8.58□□□□□ -1.04
RAB40B-206ENST00000571995 ALMS1Q8TCU4 4167 aa8.58□□□□□ -1.04
RAB40B-206ENST00000571995 S4R3F8 94 aa8.56□□□□□ -1.04
RAB40B-206ENST00000571995 RPS29P62273 56 aaKnown RBP8.55□□□□□ -1.04
RAB40B-206ENST00000571995 CSAG1Q6PB30 78 aa8.54□□□□□ -1.04
RAB40B-206ENST00000571995 XP32Q5T750 250 aa8.53□□□□□ -1.04
RAB40B-206ENST00000571995 APOBP04114 4563 aaKnown RBP8.52□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms