RNA–Protein interactions for RNA: ENST00000571252.2

PCDHGA4-201, Transcript of protocadherin gamma subfamily A, 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA4, Length 4,778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4-201ENST00000571252 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.86□□□□□ -1.31
PCDHGA4-201ENST00000571252 MIR22HGQ0VDD5 57 aa6.86□□□□□ -1.31
PCDHGA4-201ENST00000571252 Q5VV11 94 aa6.84□□□□□ -1.31
PCDHGA4-201ENST00000571252 Q75L30 129 aa6.84□□□□□ -1.31
PCDHGA4-201ENST00000571252 KRTAP1-5Q9BYS1 174 aa6.84□□□□□ -1.32
PCDHGA4-201ENST00000571252 C9orf92A6NGG3 77 aa6.82□□□□□ -1.32
PCDHGA4-201ENST00000571252 LCA10Q71F78 164 aa6.82□□□□□ -1.32
PCDHGA4-201ENST00000571252 ZCCHC13Q8WW36 166 aaKnown RBP6.81□□□□□ -1.32
PCDHGA4-201ENST00000571252 LINC01558Q9Y6Z2 57 aa6.8□□□□□ -1.32
PCDHGA4-201ENST00000571252 KRTAP29-1A8MX34 341 aaPredicted RBP6.78□□□□□ -1.32
PCDHGA4-201ENST00000571252 HRES1P13985 223 aa6.77□□□□□ -1.33
PCDHGA4-201ENST00000571252 RBM12B-AS1Q9P1G2 102 aa6.75□□□□□ -1.33
PCDHGA4-201ENST00000571252 Q8N1X5 172 aa6.73□□□□□ -1.33
PCDHGA4-201ENST00000571252 KRTAP7-1Q8IUC3 87 aa6.72□□□□□ -1.33
PCDHGA4-201ENST00000571252 LCE6AA0A183 80 aa6.72□□□□□ -1.33
PCDHGA4-201ENST00000571252 SPINK7P58062 85 aa6.71□□□□□ -1.33
PCDHGA4-201ENST00000571252 KRTAP21-3Q3LHN1 58 aa6.7□□□□□ -1.34
PCDHGA4-201ENST00000571252 PLAC8Q9NZF1 115 aa6.7□□□□□ -1.34
PCDHGA4-201ENST00000571252 TENM2Q9NT68 2774 aa6.7□□□□□ -1.34
PCDHGA4-201ENST00000571252 PANO1I0J062 215 aa6.68□□□□□ -1.34
PCDHGA4-201ENST00000571252 SPINT4Q6UDR6 99 aa6.68□□□□□ -1.34
PCDHGA4-201ENST00000571252 Q5W150 140 aa6.66□□□□□ -1.34
PCDHGA4-201ENST00000571252 Q6ZSA8 131 aa6.66□□□□□ -1.34
PCDHGA4-201ENST00000571252 KRTAP11-1Q8IUC1 163 aa6.66□□□□□ -1.34
PCDHGA4-201ENST00000571252 Q6ZR54 194 aa6.65□□□□□ -1.34
PCDHGA4-201ENST00000571252 PRAC1Q96KF2 57 aa6.63□□□□□ -1.35
PCDHGA4-201ENST00000571252 LINC00483Q53H64 154 aa6.62□□□□□ -1.35
PCDHGA4-201ENST00000571252 CRIPTQ9P021 101 aa6.6□□□□□ -1.35
PCDHGA4-201ENST00000571252 LINC01554Q52M75 96 aa6.6□□□□□ -1.35
PCDHGA4-201ENST00000571252 A0A087X002 238 aa6.59□□□□□ -1.35
PCDHGA4-201ENST00000571252 NOTCH2NLQ7Z3S9 236 aa6.59□□□□□ -1.35
PCDHGA4-201ENST00000571252 DMAC1Q96GE9 116 aa6.57□□□□□ -1.36
PCDHGA4-201ENST00000571252 A8MU10 97 aa6.56□□□□□ -1.36
PCDHGA4-201ENST00000571252 A0A1B0GU33 70 aa6.54□□□□□ -1.36
PCDHGA4-201ENST00000571252 SRRM2Q9UQ35 2752 aaKnown RBP6.54□□□□□ -1.36
PCDHGA4-201ENST00000571252 M0R2T5 61 aa6.53□□□□□ -1.36
PCDHGA4-201ENST00000571252 A0A0D9SG42 100 aa6.5□□□□□ -1.37
PCDHGA4-201ENST00000571252 KRTAP13-1Q8IUC0 172 aa6.5□□□□□ -1.37
PCDHGA4-201ENST00000571252 CSMD3Q7Z407 3707 aa6.49□□□□□ -1.37
PCDHGA4-201ENST00000571252 Q6ZRN7 208 aaPredicted RBP6.49□□□□□ -1.37
PCDHGA4-201ENST00000571252 Q5VSD8 79 aa6.48□□□□□ -1.37
PCDHGA4-201ENST00000571252 CSAG1Q6PB30 78 aa6.48□□□□□ -1.37
PCDHGA4-201ENST00000571252 KRTAP10-1P60331 282 aa6.47□□□□□ -1.37
PCDHGA4-201ENST00000571252 TGP01266 2768 aa6.47□□□□□ -1.37
PCDHGA4-201ENST00000571252 A6NN06 94 aa6.46□□□□□ -1.37
PCDHGA4-201ENST00000571252 KRTAP10-2P60368 255 aa6.46□□□□□ -1.37
PCDHGA4-201ENST00000571252 ANK2Q01484 3957 aa6.45□□□□□ -1.38
PCDHGA4-201ENST00000571252 SEC61BP60468 96 aaKnown RBP6.45□□□□□ -1.38
PCDHGA4-201ENST00000571252 CAMK2N1Q7Z7J9 78 aa6.44□□□□□ -1.38
PCDHGA4-201ENST00000571252 SPATA8Q6RVD6 105 aa6.41□□□□□ -1.38
PCDHGA4-201ENST00000571252 ASB16-AS1Q495Z4 193 aa6.4□□□□□ -1.38
PCDHGA4-201ENST00000571252 COL7A1Q02388 2944 aa6.4□□□□□ -1.38
PCDHGA4-201ENST00000571252 HUWE1Q7Z6Z7 4374 aaKnown RBP6.38□□□□□ -1.39
PCDHGA4-201ENST00000571252 KRTAP13-2Q52LG2 175 aa6.32□□□□□ -1.4
PCDHGA4-201ENST00000571252 ADM2Q7Z4H4 148 aa6.32□□□□□ -1.4
PCDHGA4-201ENST00000571252 S4R3F8 94 aa6.31□□□□□ -1.4
PCDHGA4-201ENST00000571252 H3BS24 57 aa6.31□□□□□ -1.4
PCDHGA4-201ENST00000571252 H1FX-AS1Q4G0G2 97 aa6.3□□□□□ -1.4
PCDHGA4-201ENST00000571252 R4GN34 69 aa6.3□□□□□ -1.4
PCDHGA4-201ENST00000571252 DNAH10Q8IVF4 4471 aa6.3□□□□□ -1.4
PCDHGA4-201ENST00000571252 RPL37P61927 97 aaKnown RBP6.26□□□□□ -1.41
PCDHGA4-201ENST00000571252 FBN3Q75N90 2809 aa6.25□□□□□ -1.41
PCDHGA4-201ENST00000571252 MEGF8Q7Z7M0 2845 aa6.24□□□□□ -1.41
PCDHGA4-201ENST00000571252 LUZP6Q538Z0 58 aa6.24□□□□□ -1.41
PCDHGA4-201ENST00000571252 LYSTQ99698 3801 aa6.23□□□□□ -1.41
PCDHGA4-201ENST00000571252 CMYA5Q8N3K9 4069 aa6.23□□□□□ -1.41
PCDHGA4-201ENST00000571252 ROMO1P60602 79 aa6.22□□□□□ -1.41
PCDHGA4-201ENST00000571252 DNAH9Q9NYC9 4486 aa6.19□□□□□ -1.42
PCDHGA4-201ENST00000571252 RPS29P62273 56 aaKnown RBP6.17□□□□□ -1.42
PCDHGA4-201ENST00000571252 DNAH3Q8TD57 4116 aa6.17□□□□□ -1.42
PCDHGA4-201ENST00000571252 PLECQ15149 4684 aaKnown RBP6.16□□□□□ -1.42
PCDHGA4-201ENST00000571252 KRTAP25-1Q3LHN0 102 aa6.14□□□□□ -1.43
PCDHGA4-201ENST00000571252 M0QZ58 72 aa6.13□□□□□ -1.43
PCDHGA4-201ENST00000571252 KRTAP1-4P0C5Y4 121 aa6.09□□□□□ -1.43
PCDHGA4-201ENST00000571252 DNAH7Q8WXX0 4024 aa6.07□□□□□ -1.44
PCDHGA4-201ENST00000571252 DNAH1Q9P2D7 4330 aa6.06□□□□□ -1.44
PCDHGA4-201ENST00000571252 A8MUU9 505 aa6.06□□□□□ -1.44
PCDHGA4-201ENST00000571252 PLAC4Q8WY50 150 aa6.06□□□□□ -1.44
PCDHGA4-201ENST00000571252 KRTAP13-3Q3SY46 172 aa6.06□□□□□ -1.44
PCDHGA4-201ENST00000571252 KRTAP16-1A8MUX0 517 aa6.05□□□□□ -1.44
PCDHGA4-201ENST00000571252 STARD9Q9P2P6 4700 aa6.05□□□□□ -1.44
PCDHGA4-201ENST00000571252 C20orf166-AS1Q96NR2 134 aa6.04□□□□□ -1.44
PCDHGA4-201ENST00000571252 PRKDCP78527 4128 aaKnown RBP6.03□□□□□ -1.44
PCDHGA4-201ENST00000571252 A0A0A0MQY5 61 aa6.01□□□□□ -1.45
PCDHGA4-201ENST00000571252 KMT2AQ03164 3969 aa6□□□□□ -1.45
PCDHGA4-201ENST00000571252 H0YAA0 97 aa5.99□□□□□ -1.45
PCDHGA4-201ENST00000571252 VPS13DQ5THJ4 4388 aa5.96□□□□□ -1.46
PCDHGA4-201ENST00000571252 FRAS1Q86XX4 4008 aa5.92□□□□□ -1.46
PCDHGA4-201ENST00000571252 DNHD1Q96M86 4753 aa5.91□□□□□ -1.46
PCDHGA4-201ENST00000571252 DNAH11Q96DT5 4516 aa5.9□□□□□ -1.46
PCDHGA4-201ENST00000571252 DNAH8Q96JB1 4490 aa5.88□□□□□ -1.47
PCDHGA4-201ENST00000571252 DYNC2H1Q8NCM8 4307 aaKnown RBP5.86□□□□□ -1.47
PCDHGA4-201ENST00000571252 DNAH17Q9UFH2 4485 aa5.86□□□□□ -1.47
PCDHGA4-201ENST00000571252 NDUFAF8A1L188 74 aa5.86□□□□□ -1.47
PCDHGA4-201ENST00000571252 HECTD4Q9Y4D8 3996 aa5.85□□□□□ -1.47
PCDHGA4-201ENST00000571252 DNAH2Q9P225 4427 aa5.84□□□□□ -1.47
PCDHGA4-201ENST00000571252 C10orf95Q9H7T3 257 aa5.82□□□□□ -1.48
PCDHGA4-201ENST00000571252 DNAH6Q9C0G6 4158 aa5.81□□□□□ -1.48
PCDHGA4-201ENST00000571252 XP32Q5T750 250 aa5.79□□□□□ -1.48
PCDHGA4-201ENST00000571252 LRP1BQ9NZR2 4599 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms