RNA–Protein interactions for RNA: ENST00000569794.1

CHD9-220, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-220ENST00000569794 GAFA1Q96PS6 74 aa1.77□□□□□ -2.13
CHD9-220ENST00000569794 PRKDCP78527 4128 aaKnown RBP1.76□□□□□ -2.13
CHD9-220ENST00000569794 SONP18583 2426 aaKnown RBP1.76□□□□□ -2.13
CHD9-220ENST00000569794 TRRAPQ9Y4A5 3859 aa1.76□□□□□ -2.13
CHD9-220ENST00000569794 K7EIL1 84 aa1.76□□□□□ -2.13
CHD9-220ENST00000569794 IFI6P09912 130 aa1.76□□□□□ -2.13
CHD9-220ENST00000569794 U3KQA8 63 aa1.76□□□□□ -2.13
CHD9-220ENST00000569794 TENM2Q9NT68 2774 aa1.76□□□□□ -2.13
CHD9-220ENST00000569794 DNAJC13O75165 2243 aa1.75□□□□□ -2.13
CHD9-220ENST00000569794 SFTA3P0C7M3 94 aa1.74□□□□□ -2.13
CHD9-220ENST00000569794 ANK3Q12955 4377 aaKnown RBP1.74□□□□□ -2.13
CHD9-220ENST00000569794 PKDREJQ9NTG1 2253 aa1.74□□□□□ -2.13
CHD9-220ENST00000569794 FLG2Q5D862 2391 aaPredicted RBP1.73□□□□□ -2.13
CHD9-220ENST00000569794 ATXN8Q156A1 80 aa1.73□□□□□ -2.13
CHD9-220ENST00000569794 KIAA1109Q2LD37 5005 aa1.73□□□□□ -2.13
CHD9-220ENST00000569794 KNL1Q8NG31 2342 aa1.73□□□□□ -2.13
CHD9-220ENST00000569794 DNAH1Q9P2D7 4330 aa1.72□□□□□ -2.13
CHD9-220ENST00000569794 NREPQ16612 68 aa1.71□□□□□ -2.14
CHD9-220ENST00000569794 SPINK9Q5DT21 86 aa1.71□□□□□ -2.14
CHD9-220ENST00000569794 HERC1Q15751 4861 aa1.71□□□□□ -2.14
CHD9-220ENST00000569794 DYNC2H1Q8NCM8 4307 aaKnown RBP1.7□□□□□ -2.14
CHD9-220ENST00000569794 LINC00959A0A1B0GUT2 108 aa1.7□□□□□ -2.14
CHD9-220ENST00000569794 C3orf79P0CE67 100 aa1.7□□□□□ -2.14
CHD9-220ENST00000569794 COL7A1Q02388 2944 aa1.69□□□□□ -2.14
CHD9-220ENST00000569794 HMGA1P17096 107 aaKnown RBP1.69□□□□□ -2.14
CHD9-220ENST00000569794 AKAP6Q13023 2319 aa1.69□□□□□ -2.14
CHD9-220ENST00000569794 LCE6AA0A183 80 aa1.68□□□□□ -2.14
CHD9-220ENST00000569794 COX7BP24311 80 aa1.68□□□□□ -2.14
CHD9-220ENST00000569794 DEFB133Q30KQ1 61 aa1.68□□□□□ -2.14
CHD9-220ENST00000569794 FXYD6-FXYD2A0A087WZ82 144 aa1.67□□□□□ -2.14
CHD9-220ENST00000569794 A0A0D9SFI3 127 aa1.67□□□□□ -2.14
CHD9-220ENST00000569794 TFF3Q07654 80 aa1.67□□□□□ -2.14
CHD9-220ENST00000569794 STAB2Q8WWQ8 2551 aa1.67□□□□□ -2.14
CHD9-220ENST00000569794 CNTRLQ7Z7A1 2325 aa1.67□□□□□ -2.14
CHD9-220ENST00000569794 SACSQ9NZJ4 4579 aa1.67□□□□□ -2.14
CHD9-220ENST00000569794 ABCA13Q86UQ4 5058 aa1.66□□□□□ -2.14
CHD9-220ENST00000569794 RPL38P63173 70 aaKnown RBP1.66□□□□□ -2.14
CHD9-220ENST00000569794 SPTY2D1-AS1A0A0U1RR47 76 aa1.65□□□□□ -2.15
CHD9-220ENST00000569794 TP53AIP1Q9HCN2 124 aa1.65□□□□□ -2.15
CHD9-220ENST00000569794 FAM103A1Q9BTL3 118 aaKnown RBP1.64□□□□□ -2.15
CHD9-220ENST00000569794 PIGYQ3MUY2 71 aa1.63□□□□□ -2.15
CHD9-220ENST00000569794 HECTD4Q9Y4D8 3996 aa1.63□□□□□ -2.15
CHD9-220ENST00000569794 CMYA5Q8N3K9 4069 aa1.62□□□□□ -2.15
CHD9-220ENST00000569794 MUC2Q02817 5179 aa1.62□□□□□ -2.15
CHD9-220ENST00000569794 STATHP02808 62 aa1.62□□□□□ -2.15
CHD9-220ENST00000569794 CRIPTQ9P021 101 aa1.62□□□□□ -2.15
CHD9-220ENST00000569794 CADP27708 2225 aa1.62□□□□□ -2.15
CHD9-220ENST00000569794 USF3Q68DE3 2245 aa1.62□□□□□ -2.15
CHD9-220ENST00000569794 SORL1Q92673 2214 aa1.62□□□□□ -2.15
CHD9-220ENST00000569794 ARL14EPLP0DKL9 152 aa1.61□□□□□ -2.15
CHD9-220ENST00000569794 ENHOQ6UWT2 76 aa1.61□□□□□ -2.15
CHD9-220ENST00000569794 ROS1P08922 2347 aa1.61□□□□□ -2.15
CHD9-220ENST00000569794 CACNA1CQ13936 2221 aa1.6□□□□□ -2.15
CHD9-220ENST00000569794 LYSTQ99698 3801 aa1.6□□□□□ -2.15
CHD9-220ENST00000569794 LINC01549A6NIU2 74 aa1.6□□□□□ -2.15
CHD9-220ENST00000569794 NDUFA4O00483 81 aa1.6□□□□□ -2.15
CHD9-220ENST00000569794 COX6A2Q02221 97 aa1.6□□□□□ -2.15
CHD9-220ENST00000569794 PRO0255Q9UI72 69 aa1.6□□□□□ -2.15
CHD9-220ENST00000569794 I3L2K1 104 aa1.59□□□□□ -2.15
CHD9-220ENST00000569794 USMG5Q96IX5 58 aa1.59□□□□□ -2.15
CHD9-220ENST00000569794 CNFNQ9BYD5 112 aa1.59□□□□□ -2.15
CHD9-220ENST00000569794 CSMD3Q7Z407 3707 aa1.59□□□□□ -2.16
CHD9-220ENST00000569794 DMBT1Q9UGM3 2413 aaPredicted RBP1.59□□□□□ -2.16
CHD9-220ENST00000569794 SRRM2Q9UQ35 2752 aaKnown RBP1.58□□□□□ -2.16
CHD9-220ENST00000569794 A0A0D9SG42 100 aa1.58□□□□□ -2.16
CHD9-220ENST00000569794 CPSF4LA6NMK7 179 aaKnown RBP1.58□□□□□ -2.16
CHD9-220ENST00000569794 I3L3M4 83 aa1.58□□□□□ -2.16
CHD9-220ENST00000569794 UBL5Q9BZL1 73 aa1.58□□□□□ -2.16
CHD9-220ENST00000569794 C10orf95Q9H7T3 257 aa1.58□□□□□ -2.16
CHD9-220ENST00000569794 HRNRQ86YZ3 2850 aaPredicted RBP1.57□□□□□ -2.16
CHD9-220ENST00000569794 FRAS1Q86XX4 4008 aa1.56□□□□□ -2.16
CHD9-220ENST00000569794 DNAH9Q9NYC9 4486 aa1.55□□□□□ -2.16
CHD9-220ENST00000569794 Q8IZM0 81 aa1.55□□□□□ -2.16
CHD9-220ENST00000569794 ANKRD36A6QL64 1941 aa1.54□□□□□ -2.16
CHD9-220ENST00000569794 PLCE1Q9P212 2302 aa1.54□□□□□ -2.16
CHD9-220ENST00000569794 K7EQZ3 153 aa1.54□□□□□ -2.16
CHD9-220ENST00000569794 KRTAP10-4P60372 401 aaPredicted RBP1.54□□□□□ -2.16
CHD9-220ENST00000569794 RNF213Q63HN8 5207 aa1.53□□□□□ -2.16
CHD9-220ENST00000569794 DNAH10Q8IVF4 4471 aa1.52□□□□□ -2.17
CHD9-220ENST00000569794 DEFB108AA8MXU0 73 aa1.52□□□□□ -2.17
CHD9-220ENST00000569794 FCER1GP30273 86 aa1.52□□□□□ -2.17
CHD9-220ENST00000569794 KMT2AQ03164 3969 aa1.51□□□□□ -2.17
CHD9-220ENST00000569794 FSIP2Q5CZC0 6907 aa1.51□□□□□ -2.17
CHD9-220ENST00000569794 FAT4Q6V0I7 4981 aa1.5□□□□□ -2.17
CHD9-220ENST00000569794 MRPL34Q9BQ48 92 aaKnown RBP1.5□□□□□ -2.17
CHD9-220ENST00000569794 DNAH7Q8WXX0 4024 aa1.5□□□□□ -2.17
CHD9-220ENST00000569794 PKHD1P08F94 4074 aa1.49□□□□□ -2.17
CHD9-220ENST00000569794 HMCN2Q8NDA2 5059 aa1.49□□□□□ -2.17
CHD9-220ENST00000569794 DNAH3Q8TD57 4116 aa1.49□□□□□ -2.17
CHD9-220ENST00000569794 PLECQ15149 4684 aaKnown RBP1.48□□□□□ -2.17
CHD9-220ENST00000569794 WNK2Q9Y3S1 2297 aa1.48□□□□□ -2.17
CHD9-220ENST00000569794 MYCBP2O75592 4640 aa1.48□□□□□ -2.17
CHD9-220ENST00000569794 HSPG2P98160 4391 aa1.48□□□□□ -2.17
CHD9-220ENST00000569794 FAT2Q9NYQ8 4349 aa1.47□□□□□ -2.17
CHD9-220ENST00000569794 DNAH11Q96DT5 4516 aa1.47□□□□□ -2.17
CHD9-220ENST00000569794 STARD9Q9P2P6 4700 aa1.46□□□□□ -2.18
CHD9-220ENST00000569794 HUWE1Q7Z6Z7 4374 aaKnown RBP1.46□□□□□ -2.18
CHD9-220ENST00000569794 CCL22O00626 93 aa1.46□□□□□ -2.18
CHD9-220ENST00000569794 FXYD6Q9H0Q3 95 aa1.46□□□□□ -2.18
CHD9-220ENST00000569794 APOBP04114 4563 aaKnown RBP1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms