RNA–Protein interactions for RNA: ENST00000569001.1

BBS4-215, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 3

Gene BBS4, Length 349 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-215ENST00000569001 MT2AP02795 61 aa-0.34□□□□□ -2.46
BBS4-215ENST00000569001 MT1XP80297 61 aa-0.34□□□□□ -2.46
BBS4-215ENST00000569001 MT1MQ8N339 61 aa-0.34□□□□□ -2.46
BBS4-215ENST00000569001 MGAQ8IWI9 3026 aa-0.34□□□□□ -2.46
BBS4-215ENST00000569001 DEPDC5O75140 1603 aa-0.35□□□□□ -2.46
BBS4-215ENST00000569001 FRYQ5TBA9 3013 aa-0.35□□□□□ -2.46
BBS4-215ENST00000569001 NCOA2Q15596 1464 aa-0.35□□□□□ -2.46
BBS4-215ENST00000569001 MT1FP04733 61 aa-0.35□□□□□ -2.47
BBS4-215ENST00000569001 MT1GP13640 62 aa-0.35□□□□□ -2.47
BBS4-215ENST00000569001 MT1HP80294 61 aa-0.35□□□□□ -2.47
BBS4-215ENST00000569001 DEFA5Q01523 94 aa-0.35□□□□□ -2.47
BBS4-215ENST00000569001 TDRG1Q3Y452 100 aa-0.35□□□□□ -2.47
BBS4-215ENST00000569001 KRTAP8-1Q8IUC2 63 aa-0.35□□□□□ -2.47
BBS4-215ENST00000569001 WFDC9Q8NEX5 89 aa-0.35□□□□□ -2.47
BBS4-215ENST00000569001 ZZEF1O43149 2961 aa-0.35□□□□□ -2.47
BBS4-215ENST00000569001 ADGRG4Q8IZF6 3080 aa-0.35□□□□□ -2.47
BBS4-215ENST00000569001 SMARCA2P51531 1590 aa-0.36□□□□□ -2.47
BBS4-215ENST00000569001 DMXL1Q9Y485 3027 aa-0.36□□□□□ -2.47
BBS4-215ENST00000569001 KANTRA0A1W2PQU2 76 aa-0.36□□□□□ -2.47
BBS4-215ENST00000569001 H0YGG7 62 aa-0.36□□□□□ -2.47
BBS4-215ENST00000569001 C3orf79P0CE67 100 aa-0.36□□□□□ -2.47
BBS4-215ENST00000569001 GNG2P59768 71 aa-0.36□□□□□ -2.47
BBS4-215ENST00000569001 EP400Q96L91 3159 aa-0.36□□□□□ -2.47
BBS4-215ENST00000569001 CRYBG3Q68DQ2 2970 aa-0.36□□□□□ -2.47
BBS4-215ENST00000569001 CFAP43Q8NDM7 1665 aa-0.37□□□□□ -2.47
BBS4-215ENST00000569001 FREM2Q5SZK8 3169 aa-0.37□□□□□ -2.47
BBS4-215ENST00000569001 VCANP13611 3396 aa-0.37□□□□□ -2.47
BBS4-215ENST00000569001 UTP20O75691 2785 aaKnown RBP-0.37□□□□□ -2.47
BBS4-215ENST00000569001 MT1EP04732 61 aa-0.37□□□□□ -2.47
BBS4-215ENST00000569001 HMGA1P17096 107 aaKnown RBP-0.37□□□□□ -2.47
BBS4-215ENST00000569001 THOC2Q8NI27 1593 aaKnown RBP-0.37□□□□□ -2.47
BBS4-215ENST00000569001 CFAP54Q96N23 3096 aa-0.37□□□□□ -2.47
BBS4-215ENST00000569001 KDM5DQ9BY66 1539 aa-0.38□□□□□ -2.47
BBS4-215ENST00000569001 DCAF1Q9Y4B6 1507 aa-0.38□□□□□ -2.47
BBS4-215ENST00000569001 DDX60LQ5H9U9 1706 aaKnown RBP-0.38□□□□□ -2.47
BBS4-215ENST00000569001 C5orf42Q9H799 3197 aa-0.38□□□□□ -2.47
BBS4-215ENST00000569001 HTTP42858 3142 aa-0.38□□□□□ -2.47
BBS4-215ENST00000569001 SMR3BP02814 79 aaPredicted RBP-0.38□□□□□ -2.47
BBS4-215ENST00000569001 DEFB121Q5J5C9 76 aa-0.38□□□□□ -2.47
BBS4-215ENST00000569001 ATP5EP2Q5VTU8 51 aa-0.38□□□□□ -2.47
BBS4-215ENST00000569001 MT1LQ93083 61 aa-0.38□□□□□ -2.47
BBS4-215ENST00000569001 PRO3102Q9H379 93 aa-0.38□□□□□ -2.47
BBS4-215ENST00000569001 CFAP74Q9C0B2 1584 aa-0.38□□□□□ -2.47
BBS4-215ENST00000569001 PLCH1Q4KWH8 1693 aa-0.38□□□□□ -2.47
BBS4-215ENST00000569001 PRUNE2Q8WUY3 3088 aa-0.38□□□□□ -2.47
BBS4-215ENST00000569001 DNAH14Q0VDD8 3507 aa-0.38□□□□□ -2.47
BBS4-215ENST00000569001 USP34Q70CQ2 3546 aa-0.38□□□□□ -2.47
BBS4-215ENST00000569001 DMDP11532 3685 aa-0.39□□□□□ -2.47
BBS4-215ENST00000569001 RANBP2P49792 3224 aaKnown RBP-0.39□□□□□ -2.47
BBS4-215ENST00000569001 ATMQ13315 3056 aa-0.39□□□□□ -2.47
BBS4-215ENST00000569001 UMAD1C9J7I0 102 aa-0.39□□□□□ -2.47
BBS4-215ENST00000569001 LYNX1G3V0Z9 82 aa-0.39□□□□□ -2.47
BBS4-215ENST00000569001 H0YAA0 97 aa-0.39□□□□□ -2.47
BBS4-215ENST00000569001 ABCC1P33527 1531 aa-0.39□□□□□ -2.47
BBS4-215ENST00000569001 MKI67P46013 3256 aaKnown RBP-0.39□□□□□ -2.47
BBS4-215ENST00000569001 PCNTO95613 3336 aa-0.39□□□□□ -2.47
BBS4-215ENST00000569001 VPS13CQ709C8 3753 aa-0.4□□□□□ -2.47
BBS4-215ENST00000569001 ITSN1Q15811 1721 aa-0.4□□□□□ -2.47
BBS4-215ENST00000569001 IFI6P09912 130 aa-0.4□□□□□ -2.47
BBS4-215ENST00000569001 IFI27P40305 119 aaPredicted RBP-0.4□□□□□ -2.47
BBS4-215ENST00000569001 ST20Q9HBF5 79 aa-0.4□□□□□ -2.47
BBS4-215ENST00000569001 RNF17Q9BXT8 1623 aaKnown RBP-0.4□□□□□ -2.47
BBS4-215ENST00000569001 EIF2AK4Q9P2K8 1649 aaKnown RBP-0.4□□□□□ -2.47
BBS4-215ENST00000569001 WDFY3Q8IZQ1 3526 aa-0.4□□□□□ -2.47
BBS4-215ENST00000569001 CEP290O15078 2479 aa-0.4□□□□□ -2.47
BBS4-215ENST00000569001 CEP350Q5VT06 3117 aa-0.4□□□□□ -2.47
BBS4-215ENST00000569001 ERVK-7P63135 1459 aa-0.41□□□□□ -2.47
BBS4-215ENST00000569001 CCDC18Q5T9S5 1454 aa-0.41□□□□□ -2.47
BBS4-215ENST00000569001 SPTBN5Q9NRC6 3674 aaKnown RBP-0.41□□□□□ -2.47
BBS4-215ENST00000569001 C9orf92A6NGG3 77 aa-0.41□□□□□ -2.48
BBS4-215ENST00000569001 LINC00158P58513 81 aa-0.41□□□□□ -2.48
BBS4-215ENST00000569001 KRTAP19-5Q3LI72 72 aa-0.41□□□□□ -2.48
BBS4-215ENST00000569001 ZC3H13Q5T200 1668 aaKnown RBP-0.41□□□□□ -2.48
BBS4-215ENST00000569001 CD163L1Q9NR16 1453 aa-0.41□□□□□ -2.48
BBS4-215ENST00000569001 FRYLO94915 3013 aa-0.42□□□□□ -2.48
BBS4-215ENST00000569001 SPTAN1Q13813 2472 aaKnown RBP-0.42□□□□□ -2.48
BBS4-215ENST00000569001 DEFB1P60022 68 aa-0.42□□□□□ -2.48
BBS4-215ENST00000569001 KRTAP19-2Q3LHN2 52 aa-0.42□□□□□ -2.48
BBS4-215ENST00000569001 S100A13Q99584 98 aa-0.42□□□□□ -2.48
BBS4-215ENST00000569001 ANKRD50Q9ULJ7 1429 aa-0.42□□□□□ -2.48
BBS4-215ENST00000569001 RICTORQ6R327 1708 aa-0.42□□□□□ -2.48
BBS4-215ENST00000569001 ACACAQ13085 2346 aa-0.42□□□□□ -2.48
BBS4-215ENST00000569001 ARHGAP35Q9NRY4 1499 aa-0.42□□□□□ -2.48
BBS4-215ENST00000569001 TJP1Q07157 1748 aa-0.43□□□□□ -2.48
BBS4-215ENST00000569001 NDUFA4O00483 81 aa-0.43□□□□□ -2.48
BBS4-215ENST00000569001 ADIRFQ15847 76 aa-0.43□□□□□ -2.48
BBS4-215ENST00000569001 NREPQ16612 68 aa-0.43□□□□□ -2.48
BBS4-215ENST00000569001 MAP3K1Q13233 1512 aa-0.43□□□□□ -2.48
BBS4-215ENST00000569001 ASXL1Q8IXJ9 1541 aa-0.43□□□□□ -2.48
BBS4-215ENST00000569001 CEP250Q9BV73 2442 aa-0.44□□□□□ -2.48
BBS4-215ENST00000569001 CFAP47Q6ZTR5 3102 aa-0.44□□□□□ -2.48
BBS4-215ENST00000569001 DNAH12Q6ZR08 3092 aa-0.44□□□□□ -2.48
BBS4-215ENST00000569001 CDH23Q9H251 3354 aa-0.44□□□□□ -2.48
BBS4-215ENST00000569001 BRCA2P51587 3418 aa-0.44□□□□□ -2.48
BBS4-215ENST00000569001 CDC42BPGQ6DT37 1551 aa-0.45□□□□□ -2.48
BBS4-215ENST00000569001 INO80Q9ULG1 1556 aaPredicted RBP-0.45□□□□□ -2.48
BBS4-215ENST00000569001 DEFB131BA0A096LNP1 70 aa-0.45□□□□□ -2.48
BBS4-215ENST00000569001 RPS29P62273 56 aaKnown RBP-0.45□□□□□ -2.48
BBS4-215ENST00000569001 PRLHP81277 87 aa-0.45□□□□□ -2.48
BBS4-215ENST00000569001 BVES-AS1Q5T3Y7 98 aa-0.45□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms