RNA–Protein interactions for RNA: ENST00000568744.1

CYLD-213, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 2

Gene CYLD, Length 370 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-213ENST00000568744 KDM5DQ9BY66 1539 aa-1.75□□□□□ -2.69
CYLD-213ENST00000568744 ADIRFQ15847 76 aa-1.75□□□□□ -2.69
CYLD-213ENST00000568744 TIMM8BQ9Y5J9 83 aaPredicted RBP-1.75□□□□□ -2.69
CYLD-213ENST00000568744 ARHGAP35Q9NRY4 1499 aa-1.75□□□□□ -2.69
CYLD-213ENST00000568744 UBL5Q9BZL1 73 aa-1.76□□□□□ -2.69
CYLD-213ENST00000568744 TJP1Q07157 1748 aa-1.77□□□□□ -2.69
CYLD-213ENST00000568744 PARP4Q9UKK3 1724 aaKnown RBP-1.77□□□□□ -2.69
CYLD-213ENST00000568744 KCNQ1DNQ9H478 68 aa-1.77□□□□□ -2.69
CYLD-213ENST00000568744 PLECQ15149 4684 aaKnown RBP-1.77□□□□□ -2.69
CYLD-213ENST00000568744 NIPBLQ6KC79 2804 aaeCLIP-1.78□□□□□ -2.69
CYLD-213ENST00000568744 WT1-ASQ06250 92 aa-1.78□□□□□ -2.69
CYLD-213ENST00000568744 RALGAPBQ86X10 1494 aa-1.78□□□□□ -2.69
CYLD-213ENST00000568744 ITSN2Q9NZM3 1697 aa-1.79□□□□□ -2.7
CYLD-213ENST00000568744 H3BUT2 72 aa-1.79□□□□□ -2.7
CYLD-213ENST00000568744 TLN2Q9Y4G6 2542 aa-1.79□□□□□ -2.7
CYLD-213ENST00000568744 TOGARAM1Q9Y4F4 1720 aa-1.8□□□□□ -2.7
CYLD-213ENST00000568744 CRIP1P50238 77 aa-1.8□□□□□ -2.7
CYLD-213ENST00000568744 RELNP78509 3460 aa-1.8□□□□□ -2.7
CYLD-213ENST00000568744 RIF1Q5UIP0 2472 aaKnown RBP-1.8□□□□□ -2.7
CYLD-213ENST00000568744 SACSQ9NZJ4 4579 aa-1.8□□□□□ -2.7
CYLD-213ENST00000568744 RNF17Q9BXT8 1623 aaKnown RBP-1.8□□□□□ -2.7
CYLD-213ENST00000568744 S100A13Q99584 98 aa-1.81□□□□□ -2.7
CYLD-213ENST00000568744 NRAPQ86VF7 1730 aa-1.83□□□□□ -2.7
CYLD-213ENST00000568744 MMP24-AS1A0A0U1RRL7 71 aa-1.84□□□□□ -2.7
CYLD-213ENST00000568744 MINOS1Q5TGZ0 78 aa-1.84□□□□□ -2.7
CYLD-213ENST00000568744 DNAH8Q96JB1 4490 aa-1.84□□□□□ -2.7
CYLD-213ENST00000568744 ABCC1P33527 1531 aa-1.85□□□□□ -2.71
CYLD-213ENST00000568744 DCAF1Q9Y4B6 1507 aa-1.85□□□□□ -2.71
CYLD-213ENST00000568744 KIF1AQ12756 1690 aa-1.85□□□□□ -2.71
CYLD-213ENST00000568744 IGLV5-48A0A075B6I7 105 aa-1.85□□□□□ -2.71
CYLD-213ENST00000568744 TNP1P09430 55 aa-1.85□□□□□ -2.71
CYLD-213ENST00000568744 RPS27P42677 84 aaKnown RBP-1.85□□□□□ -2.71
CYLD-213ENST00000568744 RPS27LQ71UM5 84 aaKnown RBP-1.85□□□□□ -2.71
CYLD-213ENST00000568744 RYR2Q92736 4967 aa-1.86□□□□□ -2.71
CYLD-213ENST00000568744 USP9XQ93008 2570 aaPredicted RBP-1.86□□□□□ -2.71
CYLD-213ENST00000568744 GNG2P59768 71 aa-1.86□□□□□ -2.71
CYLD-213ENST00000568744 CLPSL2Q6UWE3 100 aa-1.86□□□□□ -2.71
CYLD-213ENST00000568744 INO80Q9ULG1 1556 aaPredicted RBP-1.86□□□□□ -2.71
CYLD-213ENST00000568744 FRYQ5TBA9 3013 aa-1.87□□□□□ -2.71
CYLD-213ENST00000568744 EIF2AK4Q9P2K8 1649 aaKnown RBP-1.87□□□□□ -2.71
CYLD-213ENST00000568744 BVES-AS1Q5T3Y7 98 aa-1.87□□□□□ -2.71
CYLD-213ENST00000568744 ENHOQ6UWT2 76 aa-1.88□□□□□ -2.71
CYLD-213ENST00000568744 C5orf42Q9H799 3197 aa-1.88□□□□□ -2.71
CYLD-213ENST00000568744 CMYA5Q8N3K9 4069 aa-1.89□□□□□ -2.71
CYLD-213ENST00000568744 CD163L1Q9NR16 1453 aa-1.89□□□□□ -2.71
CYLD-213ENST00000568744 LMTK2Q8IWU2 1503 aa-1.9□□□□□ -2.71
CYLD-213ENST00000568744 ETDCA0A1B0GVM5 59 aa-1.9□□□□□ -2.71
CYLD-213ENST00000568744 SMR3BP02814 79 aaPredicted RBP-1.91□□□□□ -2.72
CYLD-213ENST00000568744 ERVK-7P63135 1459 aa-1.91□□□□□ -2.72
CYLD-213ENST00000568744 DNHD1Q96M86 4753 aa-1.91□□□□□ -2.72
CYLD-213ENST00000568744 MED14O60244 1454 aa-1.92□□□□□ -2.72
CYLD-213ENST00000568744 CFAP74Q9C0B2 1584 aa-1.93□□□□□ -2.72
CYLD-213ENST00000568744 H3BUA1 57 aa-1.93□□□□□ -2.72
CYLD-213ENST00000568744 NHSQ6T4R5 1651 aa-1.93□□□□□ -2.72
CYLD-213ENST00000568744 H3BVH4 76 aa-1.94□□□□□ -2.72
CYLD-213ENST00000568744 C6orf48Q9UBA6 75 aa-1.94□□□□□ -2.72
CYLD-213ENST00000568744 LY75O60449 1722 aa-1.94□□□□□ -2.72
CYLD-213ENST00000568744 LRRIQ1Q96JM4 1722 aa-1.94□□□□□ -2.72
CYLD-213ENST00000568744 FCER1GP30273 86 aa-1.95□□□□□ -2.72
CYLD-213ENST00000568744 RB1CC1Q8TDY2 1594 aa-1.95□□□□□ -2.72
CYLD-213ENST00000568744 BPTFQ12830 3046 aa-1.96□□□□□ -2.72
CYLD-213ENST00000568744 MT1XP80297 61 aa-1.96□□□□□ -2.72
CYLD-213ENST00000568744 NCBP2-AS2Q69YL0 99 aa-1.96□□□□□ -2.72
CYLD-213ENST00000568744 C18orf32Q8TCD1 76 aa-1.96□□□□□ -2.72
CYLD-213ENST00000568744 NOP10Q9NPE3 64 aaKnown RBP-1.96□□□□□ -2.72
CYLD-213ENST00000568744 CCDC18Q5T9S5 1454 aa-1.96□□□□□ -2.72
CYLD-213ENST00000568744 CDC42BPAQ5VT25 1732 aa-1.97□□□□□ -2.72
CYLD-213ENST00000568744 COL12A1Q99715 3063 aa-1.97□□□□□ -2.72
CYLD-213ENST00000568744 DYNC2H1Q8NCM8 4307 aaKnown RBP-1.97□□□□□ -2.73
CYLD-213ENST00000568744 ANKARQ7Z5J8 1434 aa-1.98□□□□□ -2.73
CYLD-213ENST00000568744 SFTA3P0C7M3 94 aa-1.98□□□□□ -2.73
CYLD-213ENST00000568744 KRTAP8-1Q8IUC2 63 aa-1.98□□□□□ -2.73
CYLD-213ENST00000568744 RNF213Q63HN8 5207 aa-1.98□□□□□ -2.73
CYLD-213ENST00000568744 ITPR1Q14643 2758 aa-1.99□□□□□ -2.73
CYLD-213ENST00000568744 DNAH7Q8WXX0 4024 aa-2.02□□□□□ -2.73
CYLD-213ENST00000568744 MYO5CQ9NQX4 1742 aa-2.03□□□□□ -2.73
CYLD-213ENST00000568744 SPTAN1Q13813 2472 aaKnown RBP-2.03□□□□□ -2.73
CYLD-213ENST00000568744 DEFB114Q30KQ6 69 aa-2.03□□□□□ -2.73
CYLD-213ENST00000568744 ABCC6O95255 1503 aa-2.04□□□□□ -2.74
CYLD-213ENST00000568744 SPENQ96T58 3664 aaKnown RBP-2.05□□□□□ -2.74
CYLD-213ENST00000568744 SPTBN5Q9NRC6 3674 aaKnown RBP-2.06□□□□□ -2.74
CYLD-213ENST00000568744 MYO9AB2RTY4 2548 aa-2.06□□□□□ -2.74
CYLD-213ENST00000568744 SRCAPQ6ZRS2 3230 aa-2.06□□□□□ -2.74
CYLD-213ENST00000568744 DIP2AQ14689 1571 aa-2.06□□□□□ -2.74
CYLD-213ENST00000568744 DYNC1H1Q14204 4646 aaKnown RBP-2.06□□□□□ -2.74
CYLD-213ENST00000568744 MT1EP04732 61 aa-2.07□□□□□ -2.74
CYLD-213ENST00000568744 CELSR3Q9NYQ7 3312 aa-2.07□□□□□ -2.74
CYLD-213ENST00000568744 MAST1Q9Y2H9 1570 aa-2.07□□□□□ -2.74
CYLD-213ENST00000568744 C3P01024 1663 aa-2.08□□□□□ -2.74
CYLD-213ENST00000568744 ABCA8O94911 1581 aa-2.08□□□□□ -2.74
CYLD-213ENST00000568744 CHD7Q9P2D1 2997 aa-2.08□□□□□ -2.74
CYLD-213ENST00000568744 DNMBPQ6XZF7 1577 aa-2.09□□□□□ -2.74
CYLD-213ENST00000568744 ATXN8Q156A1 80 aa-2.09□□□□□ -2.74
CYLD-213ENST00000568744 LRBAP50851 2863 aa-2.09□□□□□ -2.74
CYLD-213ENST00000568744 RRBP1Q9P2E9 1410 aaKnown RBP-2.09□□□□□ -2.74
CYLD-213ENST00000568744 MROH1Q8NDA8 1641 aa-2.09□□□□□ -2.74
CYLD-213ENST00000568744 ASXL1Q8IXJ9 1541 aa-2.11□□□□□ -2.75
CYLD-213ENST00000568744 SMARCA2P51531 1590 aa-2.12□□□□□ -2.75
CYLD-213ENST00000568744 CDC42BPGQ6DT37 1551 aa-2.13□□□□□ -2.75
CYLD-213ENST00000568744 M0QY20 66 aa-2.13□□□□□ -2.75
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms