RNA–Protein interactions for RNA: ENST00000568358.1

HERPUD1-213, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-213ENST00000568358 SMIM11BQ8TCY0 68 aa2.53□□□□□ -2
HERPUD1-213ENST00000568358 SNHG12Q9BXW3 62 aa2.53□□□□□ -2
HERPUD1-213ENST00000568358 NDUFAF8A1L188 74 aa2.52□□□□□ -2.01
HERPUD1-213ENST00000568358 M0R2T5 61 aa2.52□□□□□ -2.01
HERPUD1-213ENST00000568358 COX6B2Q6YFQ2 88 aa2.52□□□□□ -2.01
HERPUD1-213ENST00000568358 IMUPQ9GZP8 106 aa2.52□□□□□ -2.01
HERPUD1-213ENST00000568358 A0A0G2JQZ4 141 aa2.51□□□□□ -2.01
HERPUD1-213ENST00000568358 LUZP6Q538Z0 58 aa2.51□□□□□ -2.01
HERPUD1-213ENST00000568358 OCIAD2Q56VL3 154 aa2.51□□□□□ -2.01
HERPUD1-213ENST00000568358 BVES-AS1Q5T3Y7 98 aa2.51□□□□□ -2.01
HERPUD1-213ENST00000568358 LINC00575Q6W349 94 aa2.51□□□□□ -2.01
HERPUD1-213ENST00000568358 ATP11AUNQ6ZP68 121 aa2.51□□□□□ -2.01
HERPUD1-213ENST00000568358 KTN1-AS1Q86SY8 53 aa2.51□□□□□ -2.01
HERPUD1-213ENST00000568358 PRR15Q8IV56 129 aa2.51□□□□□ -2.01
HERPUD1-213ENST00000568358 C12orf57Q99622 126 aa2.51□□□□□ -2.01
HERPUD1-213ENST00000568358 VPS25Q9BRG1 176 aa2.51□□□□□ -2.01
HERPUD1-213ENST00000568358 RPL37P61927 97 aaKnown RBP2.5□□□□□ -2.01
HERPUD1-213ENST00000568358 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.5□□□□□ -2.01
HERPUD1-213ENST00000568358 Q6ZQY7 126 aa2.5□□□□□ -2.01
HERPUD1-213ENST00000568358 PPDPFLQ8WWR9 84 aa2.5□□□□□ -2.01
HERPUD1-213ENST00000568358 CLEC2BQ92478 149 aa2.5□□□□□ -2.01
HERPUD1-213ENST00000568358 TRBV7-7A0A0K0K1E9 115 aa2.49□□□□□ -2.01
HERPUD1-213ENST00000568358 C9JAW5 83 aa2.49□□□□□ -2.01
HERPUD1-213ENST00000568358 LCA10Q71F78 164 aa2.49□□□□□ -2.01
HERPUD1-213ENST00000568358 Q8N9P0 234 aaPredicted RBP2.49□□□□□ -2.01
HERPUD1-213ENST00000568358 RAB37Q96AX2 223 aa2.49□□□□□ -2.01
HERPUD1-213ENST00000568358 H0YGX0 51 aa2.48□□□□□ -2.01
HERPUD1-213ENST00000568358 SMIM6P0DI80 62 aa2.48□□□□□ -2.01
HERPUD1-213ENST00000568358 MT1HP80294 61 aa2.48□□□□□ -2.01
HERPUD1-213ENST00000568358 IGFL1Q6UW32 110 aa2.48□□□□□ -2.01
HERPUD1-213ENST00000568358 HIST3H2BBQ8N257 126 aa2.48□□□□□ -2.01
HERPUD1-213ENST00000568358 HIST1H2BLQ99880 126 aa2.48□□□□□ -2.01
HERPUD1-213ENST00000568358 SPANXA2-OT1Q8N9U9 137 aa2.47□□□□□ -2.01
HERPUD1-213ENST00000568358 C14orf144Q96I85 54 aa2.47□□□□□ -2.01
HERPUD1-213ENST00000568358 OBSCN-AS1Q96MR7 158 aa2.47□□□□□ -2.01
HERPUD1-213ENST00000568358 Q96NJ1 140 aa2.47□□□□□ -2.01
HERPUD1-213ENST00000568358 CRCT1Q9UGL9 99 aa2.47□□□□□ -2.01
HERPUD1-213ENST00000568358 TRBV20-1A0A075B6N2 111 aa2.46□□□□□ -2.02
HERPUD1-213ENST00000568358 H3BUT2 72 aa2.46□□□□□ -2.02
HERPUD1-213ENST00000568358 COX8AP10176 69 aa2.46□□□□□ -2.02
HERPUD1-213ENST00000568358 Q5W150 140 aa2.46□□□□□ -2.02
HERPUD1-213ENST00000568358 TEN1Q86WV5 123 aa2.46□□□□□ -2.02
HERPUD1-213ENST00000568358 H3BQ85 93 aa2.45□□□□□ -2.02
HERPUD1-213ENST00000568358 FABP2P12104 132 aa2.45□□□□□ -2.02
HERPUD1-213ENST00000568358 KRTAP10-6P60371 365 aaPredicted RBP2.45□□□□□ -2.02
HERPUD1-213ENST00000568358 KRTAP19-2Q3LHN2 52 aa2.45□□□□□ -2.02
HERPUD1-213ENST00000568358 ADM2Q7Z4H4 148 aa2.45□□□□□ -2.02
HERPUD1-213ENST00000568358 FSIP2Q5CZC0 6907 aa2.45□□□□□ -2.02
HERPUD1-213ENST00000568358 IGKV2D-30A0A075B6S6 120 aa2.44□□□□□ -2.02
HERPUD1-213ENST00000568358 A0A0B4J2C4 111 aa2.44□□□□□ -2.02
HERPUD1-213ENST00000568358 A8MWP4 228 aa2.44□□□□□ -2.02
HERPUD1-213ENST00000568358 H3BMG7 143 aa2.44□□□□□ -2.02
HERPUD1-213ENST00000568358 K7ERU9 68 aa2.44□□□□□ -2.02
HERPUD1-213ENST00000568358 LYRM7Q5U5X0 104 aa2.44□□□□□ -2.02
HERPUD1-213ENST00000568358 HIGD1BQ9P298 99 aa2.44□□□□□ -2.02
HERPUD1-213ENST00000568358 A0A087WSZ3 146 aa2.43□□□□□ -2.02
HERPUD1-213ENST00000568358 TAX1BP3O14907 124 aa2.43□□□□□ -2.02
HERPUD1-213ENST00000568358 DNAL4O96015 105 aa2.43□□□□□ -2.02
HERPUD1-213ENST00000568358 COX6CP09669 75 aa2.43□□□□□ -2.02
HERPUD1-213ENST00000568358 SPATA45Q537H7 98 aa2.43□□□□□ -2.02
HERPUD1-213ENST00000568358 VAMP8Q9BV40 100 aa2.43□□□□□ -2.02
HERPUD1-213ENST00000568358 PRO1854Q9UHT4 67 aa2.43□□□□□ -2.02
HERPUD1-213ENST00000568358 K7ERS5 55 aa2.42□□□□□ -2.02
HERPUD1-213ENST00000568358 LINC01554Q52M75 96 aa2.42□□□□□ -2.02
HERPUD1-213ENST00000568358 A8MUU9 505 aa2.41□□□□□ -2.02
HERPUD1-213ENST00000568358 TMEM256-PLSCR3K7ERE1 68 aa2.41□□□□□ -2.02
HERPUD1-213ENST00000568358 IGKV4-1P06312 121 aa2.41□□□□□ -2.02
HERPUD1-213ENST00000568358 C20orf166-AS1Q96NR2 134 aa2.41□□□□□ -2.02
HERPUD1-213ENST00000568358 ORMDL1Q9P0S3 153 aa2.41□□□□□ -2.02
HERPUD1-213ENST00000568358 TRBV7-4A0A0J9YYF1 115 aa2.4□□□□□ -2.03
HERPUD1-213ENST00000568358 DSCR10P59022 87 aa2.4□□□□□ -2.03
HERPUD1-213ENST00000568358 HIST1H4AP62805 103 aaKnown RBP2.4□□□□□ -2.03
HERPUD1-213ENST00000568358 TRACP01848 142 aa2.39□□□□□ -2.03
HERPUD1-213ENST00000568358 CCKP06307 115 aa2.39□□□□□ -2.03
HERPUD1-213ENST00000568358 A0A1W2PNM2 257 aa2.38□□□□□ -2.03
HERPUD1-213ENST00000568358 FXYD2P54710 66 aa2.38□□□□□ -2.03
HERPUD1-213ENST00000568358 HSD52Q0P140 79 aa2.38□□□□□ -2.03
HERPUD1-213ENST00000568358 C2orf91Q6ZV80 131 aa2.38□□□□□ -2.03
HERPUD1-213ENST00000568358 DSCR8Q96T75 97 aa2.38□□□□□ -2.03
HERPUD1-213ENST00000568358 RBM3P98179 157 aaKnown RBP2.37□□□□□ -2.03
HERPUD1-213ENST00000568358 DEFB116Q30KQ4 102 aa2.37□□□□□ -2.03
HERPUD1-213ENST00000568358 NDUFB1O75438 58 aa2.36□□□□□ -2.03
HERPUD1-213ENST00000568358 LINC00472Q9H8W2 130 aa2.36□□□□□ -2.03
HERPUD1-213ENST00000568358 FLGP20930 4061 aaPredicted RBP2.35□□□□□ -2.03
HERPUD1-213ENST00000568358 K7ERJ3 54 aa2.35□□□□□ -2.03
HERPUD1-213ENST00000568358 UQCR10Q9UDW1 63 aa2.35□□□□□ -2.03
HERPUD1-213ENST00000568358 BAALC-AS2P0C853 105 aa2.34□□□□□ -2.03
HERPUD1-213ENST00000568358 A6NED7 52 aa2.33□□□□□ -2.04
HERPUD1-213ENST00000568358 J3QR89 54 aa2.33□□□□□ -2.04
HERPUD1-213ENST00000568358 PYY3Q5JQD4 70 aa2.33□□□□□ -2.04
HERPUD1-213ENST00000568358 LCE1AQ5T7P2 110 aa2.33□□□□□ -2.04
HERPUD1-213ENST00000568358 JMJD7-PLA2G4BH0Y9G9 81 aa2.32□□□□□ -2.04
HERPUD1-213ENST00000568358 PDE6GP18545 87 aa2.32□□□□□ -2.04
HERPUD1-213ENST00000568358 SPINK7P58062 85 aa2.32□□□□□ -2.04
HERPUD1-213ENST00000568358 KRTAP10-10P60014 251 aa2.32□□□□□ -2.04
HERPUD1-213ENST00000568358 ATXN8Q156A1 80 aa2.32□□□□□ -2.04
HERPUD1-213ENST00000568358 Q6ZQT0 140 aa2.32□□□□□ -2.04
HERPUD1-213ENST00000568358 ZCCHC13Q8WW36 166 aaKnown RBP2.32□□□□□ -2.04
HERPUD1-213ENST00000568358 LINC00846Q9NV44 126 aa2.32□□□□□ -2.04
HERPUD1-213ENST00000568358 A0A1B0GU33 70 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms