RNA–Protein interactions for RNA: ENST00000567947.1

CBFB-208, Transcript of core-binding factor subunit beta, human

TSL 3

Gene CBFB, Length 610 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBFB-208	ENST00000567947	FRAS1	Q86XX4	4008 aa		3.08	□□□□□ -1.92
CBFB-208	ENST00000567947	LINC01554	Q52M75	96 aa		3.07	□□□□□ -1.92
CBFB-208	ENST00000567947	C16orf74	Q96GX8	76 aa		3.07	□□□□□ -1.92
CBFB-208	ENST00000567947	HECTD4	Q9Y4D8	3996 aa		3.07	□□□□□ -1.92
CBFB-208	ENST00000567947	IGKV3-7	A0A075B6H7	116 aa		3.06	□□□□□ -1.92
CBFB-208	ENST00000567947	GIG44	P09565	113 aa	Predicted RBP	3.06	□□□□□ -1.92
CBFB-208	ENST00000567947	DNAH10	Q8IVF4	4471 aa		3.06	□□□□□ -1.92
CBFB-208	ENST00000567947		Q8NAQ8	132 aa		3.06	□□□□□ -1.92
CBFB-208	ENST00000567947	SPTSSB	Q8NFR3	76 aa		3.06	□□□□□ -1.92
CBFB-208	ENST00000567947	PRR15L	Q9BU68	103 aa		3.06	□□□□□ -1.92
CBFB-208	ENST00000567947	PKHD1	P08F94	4074 aa		3.05	□□□□□ -1.92
CBFB-208	ENST00000567947	TRGV1	A0A0A0MS02	117 aa		3.05	□□□□□ -1.92
CBFB-208	ENST00000567947	TRGV4	A0A0C4DH28	118 aa		3.05	□□□□□ -1.92
CBFB-208	ENST00000567947	DEFB131A	P59861	70 aa		3.05	□□□□□ -1.92
CBFB-208	ENST00000567947	C9orf163	Q8N9P6	203 aa		3.05	□□□□□ -1.92
CBFB-208	ENST00000567947	WFDC10A	Q9H1F0	79 aa		3.05	□□□□□ -1.92
CBFB-208	ENST00000567947	DHRS4-AS1	Q9P1J3	65 aa		3.05	□□□□□ -1.92
CBFB-208	ENST00000567947	BIRC6	Q9NR09	4857 aa		3.05	□□□□□ -1.92
CBFB-208	ENST00000567947	DNAH17	Q9UFH2	4485 aa		3.05	□□□□□ -1.92
CBFB-208	ENST00000567947		H3BNG1	76 aa		3.04	□□□□□ -1.92
CBFB-208	ENST00000567947	MOBP	Q13875	183 aa		3.04	□□□□□ -1.92
CBFB-208	ENST00000567947	SCX	Q7RTU7	201 aa		3.04	□□□□□ -1.92
CBFB-208	ENST00000567947	FAT2	Q9NYQ8	4349 aa		3.03	□□□□□ -1.92
CBFB-208	ENST00000567947	DNAH2	Q9P225	4427 aa		3.03	□□□□□ -1.92
CBFB-208	ENST00000567947	RPL37AP8	A6NKH3	93 aa		3.03	□□□□□ -1.92
CBFB-208	ENST00000567947	HTN1	P15515	57 aa		3.03	□□□□□ -1.92
CBFB-208	ENST00000567947	KRTAP5-2	Q701N4	177 aa		3.03	□□□□□ -1.92
CBFB-208	ENST00000567947	TYMSOS	Q8TAI1	123 aa		3.03	□□□□□ -1.92
CBFB-208	ENST00000567947	EPPK1	P58107	5090 aa	Known RBP	3.03	□□□□□ -1.92
CBFB-208	ENST00000567947	IGKV2D-24	A0A075B6R9	120 aa		3.02	□□□□□ -1.93
CBFB-208	ENST00000567947	LRCOL1	A6NCL2	159 aa		3.02	□□□□□ -1.93
CBFB-208	ENST00000567947	PRR3	P79522	188 aa	Known RBP	3.02	□□□□□ -1.93
CBFB-208	ENST00000567947	SPAG11B	Q08648	103 aa		3.02	□□□□□ -1.93
CBFB-208	ENST00000567947	DEFB135	Q30KP9	77 aa		3.02	□□□□□ -1.93
CBFB-208	ENST00000567947	KRTAP5-5	Q701N2	237 aa	Predicted RBP	3.02	□□□□□ -1.93
CBFB-208	ENST00000567947	TP53AIP1	Q9HCN2	124 aa		3.02	□□□□□ -1.93
CBFB-208	ENST00000567947	DEFB131B	A0A096LNP1	70 aa		3.01	□□□□□ -1.93
CBFB-208	ENST00000567947	COA5	Q86WW8	74 aa		3.01	□□□□□ -1.93
CBFB-208	ENST00000567947		Q8N9L7	120 aa		3.01	□□□□□ -1.93
CBFB-208	ENST00000567947	RETNLB	Q9BQ08	111 aa		3.01	□□□□□ -1.93
CBFB-208	ENST00000567947	RTL8C	O15255	209 aa		3	□□□□□ -1.93
CBFB-208	ENST00000567947	SPART-AS1	P0CW21	52 aa		3	□□□□□ -1.93
CBFB-208	ENST00000567947	C1orf137	Q5JT78	98 aa		3	□□□□□ -1.93
CBFB-208	ENST00000567947	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	3	□□□□□ -1.93
CBFB-208	ENST00000567947	KLK12	Q9UKR0	248 aa		3	□□□□□ -1.93
CBFB-208	ENST00000567947	PKD1	P98161	4303 aa		3	□□□□□ -1.93
CBFB-208	ENST00000567947	IGLV8-61	A0A075B6I0	122 aa		2.99	□□□□□ -1.93
CBFB-208	ENST00000567947		A0A1W2PNM2	257 aa		2.99	□□□□□ -1.93
CBFB-208	ENST00000567947		H0Y9J4	135 aa		2.99	□□□□□ -1.93
CBFB-208	ENST00000567947		H0Y9P7	68 aa		2.99	□□□□□ -1.93
CBFB-208	ENST00000567947	LINC00313	P59037	77 aa		2.99	□□□□□ -1.93
CBFB-208	ENST00000567947	REG3A	Q06141	175 aa		2.99	□□□□□ -1.93
CBFB-208	ENST00000567947	ST20-AS1	Q8NBB2	130 aa		2.99	□□□□□ -1.93
CBFB-208	ENST00000567947		Q8NDZ9	215 aa		2.99	□□□□□ -1.93
CBFB-208	ENST00000567947	PRO0255	Q9UI72	69 aa		2.99	□□□□□ -1.93
CBFB-208	ENST00000567947	APLN	Q9ULZ1	77 aa		2.99	□□□□□ -1.93
CBFB-208	ENST00000567947	DYNC1H1	Q14204	4646 aa	Known RBP	2.98	□□□□□ -1.93
CBFB-208	ENST00000567947		K7EQZ3	153 aa		2.98	□□□□□ -1.93
CBFB-208	ENST00000567947	NOP10	Q9NPE3	64 aa	Known RBP	2.98	□□□□□ -1.93
CBFB-208	ENST00000567947	HERC2	O95714	4834 aa		2.98	□□□□□ -1.93
CBFB-208	ENST00000567947	PCLO	Q9Y6V0	5065 aa		2.97	□□□□□ -1.93
CBFB-208	ENST00000567947	IGKV3OR2-268	A0A0C4DH90	116 aa		2.97	□□□□□ -1.93
CBFB-208	ENST00000567947	SPRR1A	P35321	89 aa		2.97	□□□□□ -1.93
CBFB-208	ENST00000567947	ANAPC11	Q9NYG5	84 aa		2.97	□□□□□ -1.93
CBFB-208	ENST00000567947	DNAH11	Q96DT5	4516 aa		2.97	□□□□□ -1.93
CBFB-208	ENST00000567947	SPATA8	Q6RVD6	105 aa		2.96	□□□□□ -1.94
CBFB-208	ENST00000567947	UNQ6190/PRO20217	Q6UXQ8	127 aa		2.96	□□□□□ -1.94
CBFB-208	ENST00000567947		Q6ZRX8	168 aa		2.96	□□□□□ -1.94
CBFB-208	ENST00000567947	XAGE1A	Q9HD64	81 aa		2.96	□□□□□ -1.94
CBFB-208	ENST00000567947	KIAA1109	Q2LD37	5005 aa		2.95	□□□□□ -1.94
CBFB-208	ENST00000567947		A8MWP4	228 aa		2.95	□□□□□ -1.94
CBFB-208	ENST00000567947	TLX1NB	P0CAT3	122 aa		2.95	□□□□□ -1.94
CBFB-208	ENST00000567947	LELP1	Q5T871	98 aa		2.95	□□□□□ -1.94
CBFB-208	ENST00000567947	REG3G	Q6UW15	175 aa		2.95	□□□□□ -1.94
CBFB-208	ENST00000567947	KRTAP11-1	Q8IUC1	163 aa		2.95	□□□□□ -1.94
CBFB-208	ENST00000567947	C6orf48	Q9UBA6	75 aa		2.95	□□□□□ -1.94
CBFB-208	ENST00000567947	RYR1	P21817	5038 aa		2.94	□□□□□ -1.94
CBFB-208	ENST00000567947	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	2.94	□□□□□ -1.94
CBFB-208	ENST00000567947	ANG	P03950	147 aa	Known RBP	2.94	□□□□□ -1.94
CBFB-208	ENST00000567947	PRR4	Q16378	134 aa		2.93	□□□□□ -1.94
CBFB-208	ENST00000567947	HSPG2	P98160	4391 aa		2.93	□□□□□ -1.94
CBFB-208	ENST00000567947	SPINK7	P58062	85 aa		2.92	□□□□□ -1.94
CBFB-208	ENST00000567947	SPAG11A	Q6PDA7	123 aa		2.92	□□□□□ -1.94
CBFB-208	ENST00000567947	C7orf33	Q8WU49	177 aa		2.92	□□□□□ -1.94
CBFB-208	ENST00000567947	CAMK2N2	Q96S95	79 aa		2.92	□□□□□ -1.94
CBFB-208	ENST00000567947	LRP1B	Q9NZR2	4599 aa		2.91	□□□□□ -1.94
CBFB-208	ENST00000567947	IGHV6-1	A0A0B4J1U7	121 aa		2.91	□□□□□ -1.94
CBFB-208	ENST00000567947	LY6G6C	O95867	125 aa		2.91	□□□□□ -1.94
CBFB-208	ENST00000567947	IGLV1-50	A0A075B6I6	118 aa		2.9	□□□□□ -1.95
CBFB-208	ENST00000567947	NBDY	A0A0U1RRE5	68 aa		2.9	□□□□□ -1.95
CBFB-208	ENST00000567947	UQCR11	O14957	56 aa		2.9	□□□□□ -1.95
CBFB-208	ENST00000567947	DEFB4A	O15263	64 aa		2.9	□□□□□ -1.95
CBFB-208	ENST00000567947	HRES1	P13985	223 aa		2.9	□□□□□ -1.95
CBFB-208	ENST00000567947	ACYP2	P14621	99 aa		2.9	□□□□□ -1.95
CBFB-208	ENST00000567947	SPRR1B	P22528	89 aa		2.9	□□□□□ -1.95
CBFB-208	ENST00000567947	RPL37A	P61513	92 aa	Known RBP	2.9	□□□□□ -1.95
CBFB-208	ENST00000567947	LINC00472	Q9H8W2	130 aa		2.9	□□□□□ -1.95
CBFB-208	ENST00000567947	APOB	P04114	4563 aa	Known RBP	2.9	□□□□□ -1.95
CBFB-208	ENST00000567947		A0A096LPF7	62 aa		2.89	□□□□□ -1.95
CBFB-208	ENST00000567947	C1orf134	Q5TEV5	83 aa		2.89	□□□□□ -1.95

Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms