RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 COX6CP09669 75 aa2.51□□□□□ -2.01
CLK3-219ENST00000567805 PSMB2P49721 201 aa2.51□□□□□ -2.01
CLK3-219ENST00000567805 COX6B2Q6YFQ2 88 aa2.51□□□□□ -2.01
CLK3-219ENST00000567805 Q96NJ1 140 aa2.51□□□□□ -2.01
CLK3-219ENST00000567805 ORMDL1Q9P0S3 153 aa2.51□□□□□ -2.01
CLK3-219ENST00000567805 TRBV7-4A0A0J9YYF1 115 aa2.5□□□□□ -2.01
CLK3-219ENST00000567805 A0A1W2PNM2 257 aa2.5□□□□□ -2.01
CLK3-219ENST00000567805 K7ERJ3 54 aa2.5□□□□□ -2.01
CLK3-219ENST00000567805 COL5A1-AS1Q5SY13 56 aa2.5□□□□□ -2.01
CLK3-219ENST00000567805 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.5□□□□□ -2.01
CLK3-219ENST00000567805 ANKRD29Q8N6D5 301 aa2.5□□□□□ -2.01
CLK3-219ENST00000567805 C20orf166-AS1Q96NR2 134 aa2.5□□□□□ -2.01
CLK3-219ENST00000567805 UQCR10Q9UDW1 63 aa2.5□□□□□ -2.01
CLK3-219ENST00000567805 A8MUU9 505 aa2.49□□□□□ -2.01
CLK3-219ENST00000567805 M0R2T5 61 aa2.49□□□□□ -2.01
CLK3-219ENST00000567805 KRTAP10-6P60371 365 aaPredicted RBP2.49□□□□□ -2.01
CLK3-219ENST00000567805 SIGMAR1Q99720 223 aa2.49□□□□□ -2.01
CLK3-219ENST00000567805 A0A1B0GV72 72 aa2.48□□□□□ -2.01
CLK3-219ENST00000567805 TRACP01848 142 aa2.48□□□□□ -2.01
CLK3-219ENST00000567805 IGKV4-1P06312 121 aa2.48□□□□□ -2.01
CLK3-219ENST00000567805 MPLKIPQ8TAP9 179 aa2.48□□□□□ -2.01
CLK3-219ENST00000567805 CCKP06307 115 aa2.47□□□□□ -2.01
CLK3-219ENST00000567805 SCGB1C2P0DMR2 95 aa2.47□□□□□ -2.01
CLK3-219ENST00000567805 DSCR10P59022 87 aa2.47□□□□□ -2.01
CLK3-219ENST00000567805 LINC00313P59037 77 aa2.47□□□□□ -2.01
CLK3-219ENST00000567805 FSIP2Q5CZC0 6907 aa2.47□□□□□ -2.01
CLK3-219ENST00000567805 TRBV20-1A0A075B6N2 111 aa2.46□□□□□ -2.02
CLK3-219ENST00000567805 RBM3P98179 157 aaKnown RBP2.46□□□□□ -2.02
CLK3-219ENST00000567805 KRTAP15-1Q3LI76 137 aa2.46□□□□□ -2.02
CLK3-219ENST00000567805 DSCR8Q96T75 97 aa2.46□□□□□ -2.02
CLK3-219ENST00000567805 LINC00472Q9H8W2 130 aa2.46□□□□□ -2.02
CLK3-219ENST00000567805 CRCT1Q9UGL9 99 aa2.46□□□□□ -2.02
CLK3-219ENST00000567805 KRTAP16-1A8MUX0 517 aa2.45□□□□□ -2.02
CLK3-219ENST00000567805 DEFB116Q30KQ4 102 aa2.45□□□□□ -2.02
CLK3-219ENST00000567805 VPS25Q9BRG1 176 aa2.45□□□□□ -2.02
CLK3-219ENST00000567805 IGHV6-1A0A0B4J1U7 121 aa2.44□□□□□ -2.02
CLK3-219ENST00000567805 C9JAW5 83 aa2.44□□□□□ -2.02
CLK3-219ENST00000567805 C8orf87E5RJ46 101 aa2.44□□□□□ -2.02
CLK3-219ENST00000567805 BAALC-AS2P0C853 105 aa2.44□□□□□ -2.02
CLK3-219ENST00000567805 NOTCH2NLQ7Z3S9 236 aa2.44□□□□□ -2.02
CLK3-219ENST00000567805 A0A1B0GVX0 72 aa2.43□□□□□ -2.02
CLK3-219ENST00000567805 J3KT08 172 aa2.43□□□□□ -2.02
CLK3-219ENST00000567805 ATXN8Q156A1 80 aa2.43□□□□□ -2.02
CLK3-219ENST00000567805 A0A1B0GW54 56 aa2.42□□□□□ -2.02
CLK3-219ENST00000567805 JMJD7-PLA2G4BH0Y9G9 81 aa2.42□□□□□ -2.02
CLK3-219ENST00000567805 TAX1BP3O14907 124 aa2.42□□□□□ -2.02
CLK3-219ENST00000567805 SCGB1A1P11684 91 aa2.42□□□□□ -2.02
CLK3-219ENST00000567805 Q6ZQT0 140 aa2.42□□□□□ -2.02
CLK3-219ENST00000567805 RBM12B-AS1Q9P1G2 102 aa2.42□□□□□ -2.02
CLK3-219ENST00000567805 LOC110117498A0A087WWA1 95 aa2.41□□□□□ -2.02
CLK3-219ENST00000567805 FAM236DA0A1B0GTK5 79 aa2.41□□□□□ -2.02
CLK3-219ENST00000567805 K7ERU9 68 aa2.41□□□□□ -2.02
CLK3-219ENST00000567805 NDUFB1O75438 58 aa2.41□□□□□ -2.02
CLK3-219ENST00000567805 FAM236CP0DP71 79 aa2.41□□□□□ -2.02
CLK3-219ENST00000567805 PDE6GP18545 87 aa2.41□□□□□ -2.02
CLK3-219ENST00000567805 LYRM7Q5U5X0 104 aa2.41□□□□□ -2.02
CLK3-219ENST00000567805 NAA38Q9BRA0 125 aaKnown RBP2.41□□□□□ -2.02
CLK3-219ENST00000567805 HRES1P13985 223 aa2.4□□□□□ -2.03
CLK3-219ENST00000567805 A8MWP4 228 aa2.39□□□□□ -2.03
CLK3-219ENST00000567805 MTURNQ8N3F0 131 aa2.39□□□□□ -2.03
CLK3-219ENST00000567805 Q8N9P0 234 aaPredicted RBP2.39□□□□□ -2.03
CLK3-219ENST00000567805 ZCCHC13Q8WW36 166 aaKnown RBP2.39□□□□□ -2.03
CLK3-219ENST00000567805 BATFQ16520 125 aa2.38□□□□□ -2.03
CLK3-219ENST00000567805 GTF2H5Q6ZYL4 71 aa2.38□□□□□ -2.03
CLK3-219ENST00000567805 C14orf132Q9NPU4 83 aa2.38□□□□□ -2.03
CLK3-219ENST00000567805 C8orf17Q9NRJ1 99 aa2.38□□□□□ -2.03
CLK3-219ENST00000567805 IGKV3D-7A0A0C4DH55 119 aa2.37□□□□□ -2.03
CLK3-219ENST00000567805 K7EP34 96 aa2.37□□□□□ -2.03
CLK3-219ENST00000567805 SPINK7P58062 85 aa2.37□□□□□ -2.03
CLK3-219ENST00000567805 NREPQ16612 68 aa2.37□□□□□ -2.03
CLK3-219ENST00000567805 KRTAP5-11Q6L8G4 156 aa2.37□□□□□ -2.03
CLK3-219ENST00000567805 Q6ZVQ6 151 aa2.37□□□□□ -2.03
CLK3-219ENST00000567805 PRR15Q8IV56 129 aa2.37□□□□□ -2.03
CLK3-219ENST00000567805 F8W1H4 67 aa2.36□□□□□ -2.03
CLK3-219ENST00000567805 H3BT86 120 aa2.36□□□□□ -2.03
CLK3-219ENST00000567805 MT2AP02795 61 aa2.36□□□□□ -2.03
CLK3-219ENST00000567805 MMP24-AS1A0A0U1RRL7 71 aa2.35□□□□□ -2.03
CLK3-219ENST00000567805 A0A1W2PPM0 123 aa2.35□□□□□ -2.03
CLK3-219ENST00000567805 KRTAP10-7P60409 375 aaPredicted RBP2.35□□□□□ -2.03
CLK3-219ENST00000567805 TMEM254Q8TBM7 123 aa2.35□□□□□ -2.03
CLK3-219ENST00000567805 MRPL34Q9BQ48 92 aaKnown RBP2.35□□□□□ -2.03
CLK3-219ENST00000567805 USH2AO75445 5202 aa2.35□□□□□ -2.03
CLK3-219ENST00000567805 hDV103S1A0JD37 113 aa2.34□□□□□ -2.03
CLK3-219ENST00000567805 J3QR89 54 aa2.34□□□□□ -2.03
CLK3-219ENST00000567805 MT1FP04733 61 aa2.34□□□□□ -2.03
CLK3-219ENST00000567805 WFDC13Q8IUB5 93 aa2.34□□□□□ -2.03
CLK3-219ENST00000567805 K7EQZ3 153 aa2.33□□□□□ -2.04
CLK3-219ENST00000567805 BPY2O14599 106 aa2.33□□□□□ -2.04
CLK3-219ENST00000567805 KRTAP10-10P60014 251 aa2.33□□□□□ -2.04
CLK3-219ENST00000567805 PRO0461Q9UI25 63 aa2.33□□□□□ -2.04
CLK3-219ENST00000567805 SPCS1Q9Y6A9 102 aa2.33□□□□□ -2.04
CLK3-219ENST00000567805 NDUFS5O43920 106 aa2.32□□□□□ -2.04
CLK3-219ENST00000567805 PRAC1Q96KF2 57 aa2.31□□□□□ -2.04
CLK3-219ENST00000567805 SSPOA2VEC9 5147 aa2.3□□□□□ -2.04
CLK3-219ENST00000567805 IGKV2-30P06310 120 aa2.3□□□□□ -2.04
CLK3-219ENST00000567805 CASC2Q6XLA1 102 aa2.3□□□□□ -2.04
CLK3-219ENST00000567805 C7orf65Q6ZTY9 151 aa2.3□□□□□ -2.04
CLK3-219ENST00000567805 IGKV2D-30A0A075B6S6 120 aa2.29□□□□□ -2.04
CLK3-219ENST00000567805 H1FX-AS1Q4G0G2 97 aa2.29□□□□□ -2.04
CLK3-219ENST00000567805 Q8N9L7 120 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms