RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, human

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF3B3-209	ENST00000567635	SMIM11B	Q8TCY0	68 aa		3.93	□□□□□ -1.78
SF3B3-209	ENST00000567635	DHRS4-AS1	Q9P1J3	65 aa		3.93	□□□□□ -1.78
SF3B3-209	ENST00000567635		A0A0U1RQV1	116 aa		3.92	□□□□□ -1.78
SF3B3-209	ENST00000567635	LAMTOR3	Q9UHA4	124 aa		3.92	□□□□□ -1.78
SF3B3-209	ENST00000567635	NDUFC1	O43677	76 aa		3.91	□□□□□ -1.78
SF3B3-209	ENST00000567635	COX7B	P24311	80 aa		3.91	□□□□□ -1.78
SF3B3-209	ENST00000567635	RPS29	P62273	56 aa	Known RBP	3.91	□□□□□ -1.78
SF3B3-209	ENST00000567635	CYSTM1	Q9H1C7	97 aa		3.91	□□□□□ -1.78
SF3B3-209	ENST00000567635	SPRR1B	P22528	89 aa		3.9	□□□□□ -1.79
SF3B3-209	ENST00000567635	C6orf99	Q4VX62	202 aa		3.9	□□□□□ -1.79
SF3B3-209	ENST00000567635		Q8N377	158 aa		3.9	□□□□□ -1.79
SF3B3-209	ENST00000567635	IGKV3D-7	A0A0C4DH55	119 aa		3.89	□□□□□ -1.79
SF3B3-209	ENST00000567635	TRBV7-6	A0A0J9YX20	115 aa		3.89	□□□□□ -1.79
SF3B3-209	ENST00000567635	ELOF1	P60002	83 aa	Known RBP	3.89	□□□□□ -1.79
SF3B3-209	ENST00000567635	KRTAP13-3	Q3SY46	172 aa		3.89	□□□□□ -1.79
SF3B3-209	ENST00000567635	TRAV7	A0A075B6U4	112 aa		3.88	□□□□□ -1.79
SF3B3-209	ENST00000567635	DEFB105A	Q8NG35	78 aa		3.88	□□□□□ -1.79
SF3B3-209	ENST00000567635	BRK1	Q8WUW1	75 aa		3.88	□□□□□ -1.79
SF3B3-209	ENST00000567635	FAM218A	Q96MZ4	157 aa		3.88	□□□□□ -1.79
SF3B3-209	ENST00000567635	LINC00575	Q6W349	94 aa		3.87	□□□□□ -1.79
SF3B3-209	ENST00000567635	C20orf197	Q8N268	126 aa		3.87	□□□□□ -1.79
SF3B3-209	ENST00000567635	KLKP1	Q107X0	134 aa		3.86	□□□□□ -1.79
SF3B3-209	ENST00000567635	OBSCN-AS1	Q96MR7	158 aa		3.86	□□□□□ -1.79
SF3B3-209	ENST00000567635		A0A087WVE0	104 aa		3.85	□□□□□ -1.79
SF3B3-209	ENST00000567635	JMJD7-PLA2G4B	H0Y9G9	81 aa		3.85	□□□□□ -1.79
SF3B3-209	ENST00000567635		H7BZZ5	65 aa		3.85	□□□□□ -1.79
SF3B3-209	ENST00000567635	RBM3	P98179	157 aa	Known RBP	3.85	□□□□□ -1.79
SF3B3-209	ENST00000567635	ASB16-AS1	Q495Z4	193 aa		3.85	□□□□□ -1.79
SF3B3-209	ENST00000567635	LINC00846	Q9NV44	126 aa		3.85	□□□□□ -1.79
SF3B3-209	ENST00000567635	FAT4	Q6V0I7	4981 aa		3.84	□□□□□ -1.79
SF3B3-209	ENST00000567635		H3BQ85	93 aa		3.84	□□□□□ -1.79
SF3B3-209	ENST00000567635	CCK	P06307	115 aa		3.84	□□□□□ -1.79
SF3B3-209	ENST00000567635	SEC61B	P60468	96 aa	Known RBP	3.84	□□□□□ -1.79
SF3B3-209	ENST00000567635	CD164	Q04900	197 aa		3.84	□□□□□ -1.79
SF3B3-209	ENST00000567635	PMAIP1	Q13794	54 aa		3.84	□□□□□ -1.79
SF3B3-209	ENST00000567635	SMIM29	Q86T20	159 aa		3.84	□□□□□ -1.79
SF3B3-209	ENST00000567635	LIMD2	Q9BT23	127 aa		3.84	□□□□□ -1.79
SF3B3-209	ENST00000567635	UBL5	Q9BZL1	73 aa		3.84	□□□□□ -1.79
SF3B3-209	ENST00000567635	C14orf132	Q9NPU4	83 aa		3.84	□□□□□ -1.79
SF3B3-209	ENST00000567635	IGLV5-48	A0A075B6I7	105 aa		3.83	□□□□□ -1.8
SF3B3-209	ENST00000567635	LINC01547	P58512	204 aa	Predicted RBP	3.83	□□□□□ -1.8
SF3B3-209	ENST00000567635	PRR15	Q8IV56	129 aa		3.83	□□□□□ -1.8
SF3B3-209	ENST00000567635	ORMDL1	Q9P0S3	153 aa		3.83	□□□□□ -1.8
SF3B3-209	ENST00000567635	TMEM256-PLSCR3	K7ERE1	68 aa		3.82	□□□□□ -1.8
SF3B3-209	ENST00000567635	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	3.82	□□□□□ -1.8
SF3B3-209	ENST00000567635	KRTAP9-9	Q9BYP9	154 aa		3.82	□□□□□ -1.8
SF3B3-209	ENST00000567635	KRTAP9-4	Q9BYQ2	154 aa		3.82	□□□□□ -1.8
SF3B3-209	ENST00000567635	MUC2	Q02817	5179 aa		3.82	□□□□□ -1.8
SF3B3-209	ENST00000567635		F8WEM9	126 aa		3.81	□□□□□ -1.8
SF3B3-209	ENST00000567635		A0A0G2JQZ4	141 aa		3.8	□□□□□ -1.8
SF3B3-209	ENST00000567635	KRTAP4-1	Q9BYQ7	146 aa		3.8	□□□□□ -1.8
SF3B3-209	ENST00000567635		Q6ZQY7	126 aa		3.79	□□□□□ -1.8
SF3B3-209	ENST00000567635	C9orf92	A6NGG3	77 aa		3.78	□□□□□ -1.8
SF3B3-209	ENST00000567635	PDE6G	P18545	87 aa		3.77	□□□□□ -1.81
SF3B3-209	ENST00000567635	CXCL6	P80162	114 aa		3.77	□□□□□ -1.81
SF3B3-209	ENST00000567635	IGLV8-61	A0A075B6I0	122 aa		3.76	□□□□□ -1.81
SF3B3-209	ENST00000567635	SNURF	Q9Y675	71 aa		3.76	□□□□□ -1.81
SF3B3-209	ENST00000567635	KRTAP4-8	A0A0G2JLE6	195 aa		3.75	□□□□□ -1.81
SF3B3-209	ENST00000567635	TRBV7-4	A0A0J9YYF1	115 aa		3.75	□□□□□ -1.81
SF3B3-209	ENST00000567635	PCOTH	Q58A44	107 aa		3.75	□□□□□ -1.81
SF3B3-209	ENST00000567635	MPLKIP	Q8TAP9	179 aa		3.75	□□□□□ -1.81
SF3B3-209	ENST00000567635	LOC110117498	A0A087WWA1	95 aa		3.74	□□□□□ -1.81
SF3B3-209	ENST00000567635	NREP	Q16612	68 aa		3.74	□□□□□ -1.81
SF3B3-209	ENST00000567635	IGFL1	Q6UW32	110 aa		3.74	□□□□□ -1.81
SF3B3-209	ENST00000567635	TMEM254	Q8TBM7	123 aa		3.74	□□□□□ -1.81
SF3B3-209	ENST00000567635		Q1T7F1	81 aa		3.73	□□□□□ -1.81
SF3B3-209	ENST00000567635	FSIP2	Q5CZC0	6907 aa		3.72	□□□□□ -1.81
SF3B3-209	ENST00000567635		Q6ZQT0	140 aa		3.72	□□□□□ -1.81
SF3B3-209	ENST00000567635	MUC17	Q685J3	4493 aa		3.72	□□□□□ -1.81
SF3B3-209	ENST00000567635	NDUFS5	O43920	106 aa		3.71	□□□□□ -1.82
SF3B3-209	ENST00000567635	LCE1D	Q5T752	114 aa		3.71	□□□□□ -1.82
SF3B3-209	ENST00000567635		Q6ZVQ6	151 aa		3.71	□□□□□ -1.82
SF3B3-209	ENST00000567635	RPL37	P61927	97 aa	Known RBP	3.7	□□□□□ -1.82
SF3B3-209	ENST00000567635	KTN1-AS1	Q86SY8	53 aa		3.7	□□□□□ -1.82
SF3B3-209	ENST00000567635		A0A1B0GW54	56 aa		3.69	□□□□□ -1.82
SF3B3-209	ENST00000567635	hDV103S1	A0JD37	113 aa		3.69	□□□□□ -1.82
SF3B3-209	ENST00000567635	BPY2	O14599	106 aa		3.69	□□□□□ -1.82
SF3B3-209	ENST00000567635	KRTAP19-2	Q3LHN2	52 aa		3.68	□□□□□ -1.82
SF3B3-209	ENST00000567635	LCE4A	Q5TA78	99 aa		3.67	□□□□□ -1.82
SF3B3-209	ENST00000567635		A0A1W2PNM2	257 aa		3.66	□□□□□ -1.82
SF3B3-209	ENST00000567635	ATP11AUN	Q6ZP68	121 aa		3.66	□□□□□ -1.82
SF3B3-209	ENST00000567635		Q75L30	129 aa		3.65	□□□□□ -1.83
SF3B3-209	ENST00000567635		Q96NJ1	140 aa		3.65	□□□□□ -1.83
SF3B3-209	ENST00000567635	OCR1	Q9BZK8	76 aa		3.65	□□□□□ -1.83
SF3B3-209	ENST00000567635	CYP4F30P	Q9H0H9	118 aa		3.65	□□□□□ -1.83
SF3B3-209	ENST00000567635	RBM12B-AS1	Q9P1G2	102 aa		3.65	□□□□□ -1.83
SF3B3-209	ENST00000567635		A0A087WSZ3	146 aa		3.64	□□□□□ -1.83
SF3B3-209	ENST00000567635	TRAV22	A0A0B4J277	110 aa		3.64	□□□□□ -1.83
SF3B3-209	ENST00000567635	KRTAP9-7	A8MTY7	169 aa		3.64	□□□□□ -1.83
SF3B3-209	ENST00000567635	NDUFB1	O75438	58 aa		3.64	□□□□□ -1.83
SF3B3-209	ENST00000567635	MT1H	P80294	61 aa		3.64	□□□□□ -1.83
SF3B3-209	ENST00000567635	COX6B2	Q6YFQ2	88 aa		3.63	□□□□□ -1.83
SF3B3-209	ENST00000567635	KRTAP4-7	Q9BYR0	210 aa		3.63	□□□□□ -1.83
SF3B3-209	ENST00000567635	CRCT1	Q9UGL9	99 aa		3.63	□□□□□ -1.83
SF3B3-209	ENST00000567635	C1orf64	Q8NEQ6	169 aa		3.62	□□□□□ -1.83
SF3B3-209	ENST00000567635		M0R2T5	61 aa		3.61	□□□□□ -1.83
SF3B3-209	ENST00000567635	PSPHP1	O15172	72 aa		3.61	□□□□□ -1.83
SF3B3-209	ENST00000567635	IGKV4-1	P06312	121 aa		3.61	□□□□□ -1.83
SF3B3-209	ENST00000567635	C20orf166-AS1	Q96NR2	134 aa		3.61	□□□□□ -1.83
SF3B3-209	ENST00000567635		A8MUU9	505 aa		3.6	□□□□□ -1.83

Retrieved 100 of 20,778 RNA–protein pairs in 14 ms