RNA–Protein interactions for RNA: ENST00000565038.1

PALB2-203, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-203ENST00000565038 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.71□□□□□ -2.3
PALB2-203ENST00000565038 PRELID3AQ96N28 172 aa0.71□□□□□ -2.3
PALB2-203ENST00000565038 AMELXQ99217 191 aa0.71□□□□□ -2.3
PALB2-203ENST00000565038 SMIM7Q9BQ49 75 aa0.71□□□□□ -2.3
PALB2-203ENST00000565038 MANBALQ9NQG1 85 aa0.71□□□□□ -2.3
PALB2-203ENST00000565038 MRPL35Q9NZE8 188 aaKnown RBP0.71□□□□□ -2.3
PALB2-203ENST00000565038 CDKN2A-AS1Q9UH64 79 aa0.71□□□□□ -2.3
PALB2-203ENST00000565038 LAMTOR3Q9UHA4 124 aa0.71□□□□□ -2.3
PALB2-203ENST00000565038 NAT8BQ9UHF3 227 aa0.71□□□□□ -2.3
PALB2-203ENST00000565038 C7orf77A4D0Y5 90 aa0.7□□□□□ -2.3
PALB2-203ENST00000565038 NDUFA6P56556 154 aa0.7□□□□□ -2.3
PALB2-203ENST00000565038 MRPS36P82909 103 aaKnown RBP0.7□□□□□ -2.3
PALB2-203ENST00000565038 PMCHL1Q16048 86 aa0.7□□□□□ -2.3
PALB2-203ENST00000565038 SMIM15Q7Z3B0 74 aa0.7□□□□□ -2.3
PALB2-203ENST00000565038 Q8N8P6 123 aa0.7□□□□□ -2.3
PALB2-203ENST00000565038 DIRC1Q969H9 104 aa0.7□□□□□ -2.3
PALB2-203ENST00000565038 C20orf78Q9BR46 151 aa0.7□□□□□ -2.3
PALB2-203ENST00000565038 TCEAL7Q9BRU2 100 aa0.7□□□□□ -2.3
PALB2-203ENST00000565038 SMIM2Q9BVW6 85 aa0.7□□□□□ -2.3
PALB2-203ENST00000565038 TMEM218A2RU14 115 aa0.69□□□□□ -2.3
PALB2-203ENST00000565038 NDUFA1O15239 70 aa0.69□□□□□ -2.3
PALB2-203ENST00000565038 BCE1O60756 84 aa0.69□□□□□ -2.3
PALB2-203ENST00000565038 SMIM13P0DJ93 91 aa0.69□□□□□ -2.3
PALB2-203ENST00000565038 FABP4P15090 132 aa0.69□□□□□ -2.3
PALB2-203ENST00000565038 PKIAP61925 76 aa0.69□□□□□ -2.3
PALB2-203ENST00000565038 PRLHP81277 87 aa0.69□□□□□ -2.3
PALB2-203ENST00000565038 PEA15Q15121 130 aa0.69□□□□□ -2.3
PALB2-203ENST00000565038 HRCT1Q6UXD1 115 aa0.69□□□□□ -2.3
PALB2-203ENST00000565038 AKAP14Q86UN6 197 aa0.69□□□□□ -2.3
PALB2-203ENST00000565038 BAGE3Q86Y29 109 aa0.69□□□□□ -2.3
PALB2-203ENST00000565038 PRR15Q8IV56 129 aa0.69□□□□□ -2.3
PALB2-203ENST00000565038 COX7B2Q8TF08 81 aa0.69□□□□□ -2.3
PALB2-203ENST00000565038 TMEM141Q96I45 108 aa0.69□□□□□ -2.3
PALB2-203ENST00000565038 PMCHL2Q9BQD1 86 aa0.69□□□□□ -2.3
PALB2-203ENST00000565038 LINC00474Q9P2X8 69 aa0.69□□□□□ -2.3
PALB2-203ENST00000565038 LAMTOR2Q9Y2Q5 125 aa0.69□□□□□ -2.3
PALB2-203ENST00000565038 A0A087WSZ3 146 aa0.68□□□□□ -2.3
PALB2-203ENST00000565038 TRBV30A0A0K0K1B3 111 aa0.68□□□□□ -2.3
PALB2-203ENST00000565038 TRBV10-3A0A0K0K1G6 114 aa0.68□□□□□ -2.3
PALB2-203ENST00000565038 C9orf92A6NGG3 77 aa0.68□□□□□ -2.3
PALB2-203ENST00000565038 F8VRH5 84 aa0.68□□□□□ -2.3
PALB2-203ENST00000565038 JMJD7-PLA2G4BH0Y9G9 81 aa0.68□□□□□ -2.3
PALB2-203ENST00000565038 LINC00158P58513 81 aa0.68□□□□□ -2.3
PALB2-203ENST00000565038 CKS1BP61024 79 aa0.68□□□□□ -2.3
PALB2-203ENST00000565038 NPC2P61916 151 aa0.68□□□□□ -2.3
PALB2-203ENST00000565038 MT1HP80294 61 aa0.68□□□□□ -2.3
PALB2-203ENST00000565038 SPRR4Q96PI1 79 aa0.68□□□□□ -2.3
PALB2-203ENST00000565038 SPANXA1Q9NS26 97 aa0.68□□□□□ -2.3
PALB2-203ENST00000565038 LOC107984156A0A0G2JMH3 177 aa0.67□□□□□ -2.3
PALB2-203ENST00000565038 LINC01546A6NGU7 62 aa0.67□□□□□ -2.3
PALB2-203ENST00000565038 K7EMI3 77 aa0.67□□□□□ -2.3
PALB2-203ENST00000565038 PPP1R17O96001 155 aa0.67□□□□□ -2.3
PALB2-203ENST00000565038 MT-ND4LP03901 98 aa0.67□□□□□ -2.3
PALB2-203ENST00000565038 IGLC3P0DOY3 106 aa0.67□□□□□ -2.3
PALB2-203ENST00000565038 MIR22HGQ0VDD5 57 aa0.67□□□□□ -2.3
PALB2-203ENST00000565038 ASB16-AS1Q495Z4 193 aa0.67□□□□□ -2.3
PALB2-203ENST00000565038 CLLU1Q5K131 121 aa0.67□□□□□ -2.3
PALB2-203ENST00000565038 TMEM170BQ5T4T1 132 aa0.67□□□□□ -2.3
PALB2-203ENST00000565038 CASC2Q6XLA1 102 aa0.67□□□□□ -2.3
PALB2-203ENST00000565038 ARL17AQ8IVW1 177 aa0.67□□□□□ -2.3
PALB2-203ENST00000565038 Q8IZM0 81 aa0.67□□□□□ -2.3
PALB2-203ENST00000565038 DEFB105AQ8NG35 78 aa0.67□□□□□ -2.3
PALB2-203ENST00000565038 C18orf32Q8TCD1 76 aa0.67□□□□□ -2.3
PALB2-203ENST00000565038 CLEC2BQ92478 149 aa0.67□□□□□ -2.3
PALB2-203ENST00000565038 LIMD2Q9BT23 127 aa0.67□□□□□ -2.3
PALB2-203ENST00000565038 ERG28Q9UKR5 140 aa0.67□□□□□ -2.3
PALB2-203ENST00000565038 S100A8P05109 93 aa0.66□□□□□ -2.3
PALB2-203ENST00000565038 SPRR1AP35321 89 aa0.66□□□□□ -2.3
PALB2-203ENST00000565038 SPATA45Q537H7 98 aa0.66□□□□□ -2.3
PALB2-203ENST00000565038 SSBP3-AS1Q7Z2R9 100 aa0.66□□□□□ -2.3
PALB2-203ENST00000565038 C2orf88Q9BSF0 95 aa0.66□□□□□ -2.3
PALB2-203ENST00000565038 KCNQ1DNQ9H478 68 aa0.66□□□□□ -2.3
PALB2-203ENST00000565038 NXT2Q9NPJ8 142 aaKnown RBP0.66□□□□□ -2.3
PALB2-203ENST00000565038 ETDCA0A1B0GVM5 59 aa0.65□□□□□ -2.31
PALB2-203ENST00000565038 TSTD3H0UI37 97 aa0.65□□□□□ -2.31
PALB2-203ENST00000565038 TRACP01848 142 aa0.65□□□□□ -2.31
PALB2-203ENST00000565038 HBDP02042 147 aa0.65□□□□□ -2.31
PALB2-203ENST00000565038 APOC3P02656 99 aa0.65□□□□□ -2.31
PALB2-203ENST00000565038 SEC11AP67812 179 aa0.65□□□□□ -2.31
PALB2-203ENST00000565038 MEIG1Q5JSS6 88 aa0.65□□□□□ -2.31
PALB2-203ENST00000565038 MUSTN1Q8IVN3 82 aa0.65□□□□□ -2.31
PALB2-203ENST00000565038 LINC00308Q8TCZ7 52 aa0.65□□□□□ -2.31
PALB2-203ENST00000565038 BRK1Q8WUW1 75 aa0.65□□□□□ -2.31
PALB2-203ENST00000565038 IFI27L1Q96BM0 104 aa0.65□□□□□ -2.31
PALB2-203ENST00000565038 SEC11CQ9BY50 192 aa0.65□□□□□ -2.31
PALB2-203ENST00000565038 NDUFA12Q9UI09 145 aa0.65□□□□□ -2.31
PALB2-203ENST00000565038 GPR98Q8WXG9 6306 aa0.65□□□□□ -2.31
PALB2-203ENST00000565038 MYMXA0A1B0GTQ4 84 aa0.64□□□□□ -2.31
PALB2-203ENST00000565038 LOC105371267A0A1B0GV96 52 aa0.64□□□□□ -2.31
PALB2-203ENST00000565038 H3BMG7 143 aa0.64□□□□□ -2.31
PALB2-203ENST00000565038 M0R2T5 61 aa0.64□□□□□ -2.31
PALB2-203ENST00000565038 LEPROTL1O95214 131 aa0.64□□□□□ -2.31
PALB2-203ENST00000565038 SPINK1P00995 79 aa0.64□□□□□ -2.31
PALB2-203ENST00000565038 MT2AP02795 61 aa0.64□□□□□ -2.31
PALB2-203ENST00000565038 MT1FP04733 61 aa0.64□□□□□ -2.31
PALB2-203ENST00000565038 SPRR1BP22528 89 aa0.64□□□□□ -2.31
PALB2-203ENST00000565038 S100PP25815 95 aa0.64□□□□□ -2.31
PALB2-203ENST00000565038 COX17Q14061 63 aa0.64□□□□□ -2.31
PALB2-203ENST00000565038 OCIAD2Q56VL3 154 aa0.64□□□□□ -2.31
PALB2-203ENST00000565038 C9orf153Q5TBE3 101 aa0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms