RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 MRPL34Q9BQ48 92 aaKnown RBP12.26□□□□□ -0.45
MAP1LC3B-206ENST00000564844 PLECQ15149 4684 aaKnown RBP12.26□□□□□ -0.45
MAP1LC3B-206ENST00000564844 Q5W150 140 aa12.26□□□□□ -0.45
MAP1LC3B-206ENST00000564844 LINC01558Q9Y6Z2 57 aa12.26□□□□□ -0.45
MAP1LC3B-206ENST00000564844 C7orf65Q6ZTY9 151 aa12.25□□□□□ -0.45
MAP1LC3B-206ENST00000564844 C14orf177Q52M58 125 aa12.24□□□□□ -0.45
MAP1LC3B-206ENST00000564844 KRTAP13-1Q8IUC0 172 aa12.24□□□□□ -0.45
MAP1LC3B-206ENST00000564844 Q6ZR54 194 aa12.22□□□□□ -0.45
MAP1LC3B-206ENST00000564844 APLNQ9ULZ1 77 aa12.2□□□□□ -0.46
MAP1LC3B-206ENST00000564844 ASB16-AS1Q495Z4 193 aa12.19□□□□□ -0.46
MAP1LC3B-206ENST00000564844 CIRBP-AS1Q8TBR5 109 aa12.18□□□□□ -0.46
MAP1LC3B-206ENST00000564844 MEGF8Q7Z7M0 2845 aa12.18□□□□□ -0.46
MAP1LC3B-206ENST00000564844 PSORS1C2Q9UIG4 136 aa12.18□□□□□ -0.46
MAP1LC3B-206ENST00000564844 PRAC1Q96KF2 57 aa12.17□□□□□ -0.46
MAP1LC3B-206ENST00000564844 WWC2-AS2Q96NR7 200 aa12.17□□□□□ -0.46
MAP1LC3B-206ENST00000564844 NBDYA0A0U1RRE5 68 aa12.16□□□□□ -0.46
MAP1LC3B-206ENST00000564844 DNAH8Q96JB1 4490 aa12.14□□□□□ -0.47
MAP1LC3B-206ENST00000564844 PLAC8Q9NZF1 115 aa12.13□□□□□ -0.47
MAP1LC3B-206ENST00000564844 ADM2Q7Z4H4 148 aa12.12□□□□□ -0.47
MAP1LC3B-206ENST00000564844 SPACA4Q8TDM5 124 aa12.1□□□□□ -0.47
MAP1LC3B-206ENST00000564844 KMT2AQ03164 3969 aa12.05□□□□□ -0.48
MAP1LC3B-206ENST00000564844 Q6ZRN7 208 aaPredicted RBP12.04□□□□□ -0.48
MAP1LC3B-206ENST00000564844 LINC00313P59037 77 aa12.02□□□□□ -0.48
MAP1LC3B-206ENST00000564844 LINC00483Q53H64 154 aa12.02□□□□□ -0.49
MAP1LC3B-206ENST00000564844 HECTD4Q9Y4D8 3996 aa12.02□□□□□ -0.49
MAP1LC3B-206ENST00000564844 RTL8CO15255 209 aa12.01□□□□□ -0.49
MAP1LC3B-206ENST00000564844 IGLV5-52A0A0A0MRZ9 124 aa12.01□□□□□ -0.49
MAP1LC3B-206ENST00000564844 ZNF861PO60384 105 aa12□□□□□ -0.49
MAP1LC3B-206ENST00000564844 ACYP2P14621 99 aa11.99□□□□□ -0.49
MAP1LC3B-206ENST00000564844 LINC01554Q52M75 96 aa11.99□□□□□ -0.49
MAP1LC3B-206ENST00000564844 ZNF706Q9Y5V0 76 aaPredicted RBP11.99□□□□□ -0.49
MAP1LC3B-206ENST00000564844 STARD9Q9P2P6 4700 aa11.99□□□□□ -0.49
MAP1LC3B-206ENST00000564844 DNAH17Q9UFH2 4485 aa11.98□□□□□ -0.49
MAP1LC3B-206ENST00000564844 A0A087WTM6 91 aa11.97□□□□□ -0.49
MAP1LC3B-206ENST00000564844 A0A1B0GU69 56 aa11.94□□□□□ -0.5
MAP1LC3B-206ENST00000564844 KRTAP13-3Q3SY46 172 aa11.91□□□□□ -0.5
MAP1LC3B-206ENST00000564844 DNHD1Q96M86 4753 aa11.91□□□□□ -0.5
MAP1LC3B-206ENST00000564844 IGKV2D-30A0A075B6S6 120 aa11.89□□□□□ -0.51
MAP1LC3B-206ENST00000564844 IGKV2-30P06310 120 aa11.89□□□□□ -0.51
MAP1LC3B-206ENST00000564844 PRKDCP78527 4128 aaKnown RBP11.87□□□□□ -0.51
MAP1LC3B-206ENST00000564844 DNAH2Q9P225 4427 aa11.87□□□□□ -0.51
MAP1LC3B-206ENST00000564844 SPINK1P00995 79 aa11.85□□□□□ -0.51
MAP1LC3B-206ENST00000564844 LY6G6CO95867 125 aa11.85□□□□□ -0.51
MAP1LC3B-206ENST00000564844 DNAH6Q9C0G6 4158 aa11.85□□□□□ -0.51
MAP1LC3B-206ENST00000564844 NUPR2A6NF83 97 aa11.84□□□□□ -0.51
MAP1LC3B-206ENST00000564844 ALMS1Q8TCU4 4167 aa11.84□□□□□ -0.51
MAP1LC3B-206ENST00000564844 IGLV7-43P04211 117 aa11.81□□□□□ -0.52
MAP1LC3B-206ENST00000564844 DMAC1Q96GE9 116 aa11.81□□□□□ -0.52
MAP1LC3B-206ENST00000564844 VPS13DQ5THJ4 4388 aa11.78□□□□□ -0.52
MAP1LC3B-206ENST00000564844 MIR22HGQ0VDD5 57 aa11.76□□□□□ -0.53
MAP1LC3B-206ENST00000564844 DYNC2H1Q8NCM8 4307 aaKnown RBP11.75□□□□□ -0.53
MAP1LC3B-206ENST00000564844 DNAH11Q96DT5 4516 aa11.74□□□□□ -0.53
MAP1LC3B-206ENST00000564844 FAM229AH3BQW9 127 aa11.73□□□□□ -0.53
MAP1LC3B-206ENST00000564844 FLG2Q5D862 2391 aaPredicted RBP11.73□□□□□ -0.53
MAP1LC3B-206ENST00000564844 C1orf134Q5TEV5 83 aa11.7□□□□□ -0.54
MAP1LC3B-206ENST00000564844 UQCR11O14957 56 aa11.69□□□□□ -0.54
MAP1LC3B-206ENST00000564844 Q8N1X5 172 aa11.68□□□□□ -0.54
MAP1LC3B-206ENST00000564844 KRTAP10-2P60368 255 aa11.68□□□□□ -0.54
MAP1LC3B-206ENST00000564844 SPATA8Q6RVD6 105 aa11.66□□□□□ -0.54
MAP1LC3B-206ENST00000564844 KRTAP13-2Q52LG2 175 aa11.65□□□□□ -0.54
MAP1LC3B-206ENST00000564844 PLA2G1BP04054 148 aaKnown RBP11.63□□□□□ -0.55
MAP1LC3B-206ENST00000564844 CSAG1Q6PB30 78 aa11.63□□□□□ -0.55
MAP1LC3B-206ENST00000564844 SSBP3-AS1Q7Z2R9 100 aa11.63□□□□□ -0.55
MAP1LC3B-206ENST00000564844 LRP1BQ9NZR2 4599 aa11.61□□□□□ -0.55
MAP1LC3B-206ENST00000564844 KRTAP16-1A8MUX0 517 aa11.54□□□□□ -0.56
MAP1LC3B-206ENST00000564844 DNAH5Q8TE73 4624 aa11.52□□□□□ -0.57
MAP1LC3B-206ENST00000564844 DMBT1Q9UGM3 2413 aaPredicted RBP11.47□□□□□ -0.57
MAP1LC3B-206ENST00000564844 KRTAP10-1P60331 282 aa11.45□□□□□ -0.58
MAP1LC3B-206ENST00000564844 VPS13BQ7Z7G8 4022 aa11.45□□□□□ -0.58
MAP1LC3B-206ENST00000564844 FAT2Q9NYQ8 4349 aa11.38□□□□□ -0.59
MAP1LC3B-206ENST00000564844 CRIPTQ9P021 101 aa11.38□□□□□ -0.59
MAP1LC3B-206ENST00000564844 C9orf92A6NGG3 77 aa11.37□□□□□ -0.59
MAP1LC3B-206ENST00000564844 SMR3BP02814 79 aaPredicted RBP11.37□□□□□ -0.59
MAP1LC3B-206ENST00000564844 TYMSOSQ8TAI1 123 aa11.36□□□□□ -0.59
MAP1LC3B-206ENST00000564844 HYDINQ4G0P3 5121 aa11.36□□□□□ -0.59
MAP1LC3B-206ENST00000564844 KRTAP1-4P0C5Y4 121 aa11.33□□□□□ -0.6
MAP1LC3B-206ENST00000564844 Q6ZSA8 131 aa11.31□□□□□ -0.6
MAP1LC3B-206ENST00000564844 H0YAA0 97 aa11.29□□□□□ -0.6
MAP1LC3B-206ENST00000564844 A0A0A0MQY5 61 aa11.26□□□□□ -0.61
MAP1LC3B-206ENST00000564844 PKHD1P08F94 4074 aa11.21□□□□□ -0.62
MAP1LC3B-206ENST00000564844 ROMO1P60602 79 aa11.18□□□□□ -0.62
MAP1LC3B-206ENST00000564844 LINC00304Q8N9R0 145 aa11.17□□□□□ -0.62
MAP1LC3B-206ENST00000564844 A0A1B0GU33 70 aa11.16□□□□□ -0.62
MAP1LC3B-206ENST00000564844 PKD1P98161 4303 aa11.15□□□□□ -0.62
MAP1LC3B-206ENST00000564844 A8MUU9 505 aa11.13□□□□□ -0.63
MAP1LC3B-206ENST00000564844 FAT1Q14517 4588 aa11.13□□□□□ -0.63
MAP1LC3B-206ENST00000564844 KRTAP3-1Q9BYR8 98 aa11.11□□□□□ -0.63
MAP1LC3B-206ENST00000564844 KRTAP25-1Q3LHN0 102 aa11.05□□□□□ -0.64
MAP1LC3B-206ENST00000564844 H1FX-AS1Q4G0G2 97 aa11.03□□□□□ -0.64
MAP1LC3B-206ENST00000564844 P0C880 135 aa10.95□□□□□ -0.66
MAP1LC3B-206ENST00000564844 A0A0D9SG42 100 aa10.94□□□□□ -0.66
MAP1LC3B-206ENST00000564844 COX6B2Q6YFQ2 88 aa10.91□□□□□ -0.66
MAP1LC3B-206ENST00000564844 MYCBP2O75592 4640 aa10.87□□□□□ -0.67
MAP1LC3B-206ENST00000564844 K7ERS5 55 aa10.84□□□□□ -0.67
MAP1LC3B-206ENST00000564844 C20orf166-AS1Q96NR2 134 aa10.81□□□□□ -0.68
MAP1LC3B-206ENST00000564844 DYNC1H1Q14204 4646 aaKnown RBP10.81□□□□□ -0.68
MAP1LC3B-206ENST00000564844 SACSQ9NZJ4 4579 aa10.77□□□□□ -0.69
MAP1LC3B-206ENST00000564844 KMT2CQ8NEZ4 4911 aaKnown RBP10.74□□□□□ -0.69
MAP1LC3B-206ENST00000564844 LRP1Q07954 4544 aaKnown RBP10.73□□□□□ -0.69
MAP1LC3B-206ENST00000564844 C10orf95Q9H7T3 257 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms