RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 PCP4P48539 62 aa6.37□□□□□ -1.39
GTF3C1-204ENST00000564664 NDUFV3P56181 108 aaKnown RBP6.36□□□□□ -1.39
GTF3C1-204ENST00000564664 FLGP20930 4061 aaPredicted RBP6.36□□□□□ -1.39
GTF3C1-204ENST00000564664 ACYP1P07311 99 aa6.35□□□□□ -1.39
GTF3C1-204ENST00000564664 MTURNQ8N3F0 131 aa6.35□□□□□ -1.39
GTF3C1-204ENST00000564664 Q96NJ1 140 aa6.35□□□□□ -1.39
GTF3C1-204ENST00000564664 C20orf166-AS1Q96NR2 134 aa6.34□□□□□ -1.39
GTF3C1-204ENST00000564664 H3BQ85 93 aa6.33□□□□□ -1.4
GTF3C1-204ENST00000564664 A8MUU9 505 aa6.31□□□□□ -1.4
GTF3C1-204ENST00000564664 FAM218AQ96MZ4 157 aa6.31□□□□□ -1.4
GTF3C1-204ENST00000564664 A0A087WSZ3 146 aa6.3□□□□□ -1.4
GTF3C1-204ENST00000564664 BAALC-AS2P0C853 105 aa6.3□□□□□ -1.4
GTF3C1-204ENST00000564664 DNAL4O96015 105 aa6.29□□□□□ -1.4
GTF3C1-204ENST00000564664 C21orf62-AS1Q17RA5 79 aa6.27□□□□□ -1.41
GTF3C1-204ENST00000564664 TRBV7-4A0A0J9YYF1 115 aa6.26□□□□□ -1.41
GTF3C1-204ENST00000564664 IMUPQ9GZP8 106 aa6.26□□□□□ -1.41
GTF3C1-204ENST00000564664 JMJD7-PLA2G4BH0Y9G9 81 aa6.25□□□□□ -1.41
GTF3C1-204ENST00000564664 TMEM256-PLSCR3K7ERE1 68 aa6.25□□□□□ -1.41
GTF3C1-204ENST00000564664 LINC00313P59037 77 aa6.25□□□□□ -1.41
GTF3C1-204ENST00000564664 ORMDL1Q9P0S3 153 aa6.25□□□□□ -1.41
GTF3C1-204ENST00000564664 A0A1W2PNM2 257 aa6.24□□□□□ -1.41
GTF3C1-204ENST00000564664 MT-ATP8P03928 68 aa6.22□□□□□ -1.41
GTF3C1-204ENST00000564664 DSCR10P59022 87 aa6.22□□□□□ -1.41
GTF3C1-204ENST00000564664 LINC00643Q86TS7 51 aa6.22□□□□□ -1.41
GTF3C1-204ENST00000564664 IGKV4-1P06312 121 aa6.21□□□□□ -1.42
GTF3C1-204ENST00000564664 A0A1B0GV72 72 aa6.19□□□□□ -1.42
GTF3C1-204ENST00000564664 PDE6GP18545 87 aa6.19□□□□□ -1.42
GTF3C1-204ENST00000564664 LINC00472Q9H8W2 130 aa6.18□□□□□ -1.42
GTF3C1-204ENST00000564664 KRTAP16-1A8MUX0 517 aa6.17□□□□□ -1.42
GTF3C1-204ENST00000564664 CCKP06307 115 aa6.17□□□□□ -1.42
GTF3C1-204ENST00000564664 KRTAP9-8Q9BYQ0 159 aa6.17□□□□□ -1.42
GTF3C1-204ENST00000564664 RBM12B-AS1Q9P1G2 102 aa6.16□□□□□ -1.42
GTF3C1-204ENST00000564664 LOC110117498A0A087WWA1 95 aa6.15□□□□□ -1.42
GTF3C1-204ENST00000564664 FAM236DA0A1B0GTK5 79 aa6.13□□□□□ -1.43
GTF3C1-204ENST00000564664 C8orf87E5RJ46 101 aa6.13□□□□□ -1.43
GTF3C1-204ENST00000564664 FAM236CP0DP71 79 aa6.13□□□□□ -1.43
GTF3C1-204ENST00000564664 RBM3P98179 157 aaKnown RBP6.13□□□□□ -1.43
GTF3C1-204ENST00000564664 IGHV6-1A0A0B4J1U7 121 aa6.12□□□□□ -1.43
GTF3C1-204ENST00000564664 ATP5EP2Q5VTU8 51 aa6.12□□□□□ -1.43
GTF3C1-204ENST00000564664 NOTCH2NLQ7Z3S9 236 aa6.12□□□□□ -1.43
GTF3C1-204ENST00000564664 MPLKIPQ8TAP9 179 aa6.12□□□□□ -1.43
GTF3C1-204ENST00000564664 DEFB116Q30KQ4 102 aa6.11□□□□□ -1.43
GTF3C1-204ENST00000564664 DSCR8Q96T75 97 aa6.11□□□□□ -1.43
GTF3C1-204ENST00000564664 C14orf132Q9NPU4 83 aa6.11□□□□□ -1.43
GTF3C1-204ENST00000564664 A0A1B0GW54 56 aa6.1□□□□□ -1.43
GTF3C1-204ENST00000564664 J3KT08 172 aa6.1□□□□□ -1.43
GTF3C1-204ENST00000564664 A0A1B0GVX0 72 aa6.09□□□□□ -1.43
GTF3C1-204ENST00000564664 HRES1P13985 223 aa6.09□□□□□ -1.43
GTF3C1-204ENST00000564664 Q6ZQT0 140 aa6.09□□□□□ -1.43
GTF3C1-204ENST00000564664 HIST1H4AP62805 103 aaKnown RBP6.07□□□□□ -1.44
GTF3C1-204ENST00000564664 ANAPC13Q9BS18 74 aa6.07□□□□□ -1.44
GTF3C1-204ENST00000564664 LINC00846Q9NV44 126 aa6.07□□□□□ -1.44
GTF3C1-204ENST00000564664 USH2AO75445 5202 aa6.05□□□□□ -1.44
GTF3C1-204ENST00000564664 NDUFB1O75438 58 aa6.05□□□□□ -1.44
GTF3C1-204ENST00000564664 UBL5Q9BZL1 73 aa6.05□□□□□ -1.44
GTF3C1-204ENST00000564664 MT2AP02795 61 aa6.04□□□□□ -1.44
GTF3C1-204ENST00000564664 ZCCHC13Q8WW36 166 aaKnown RBP6.04□□□□□ -1.44
GTF3C1-204ENST00000564664 SSPOA2VEC9 5147 aa6.03□□□□□ -1.44
GTF3C1-204ENST00000564664 ATOX1O00244 68 aa6.02□□□□□ -1.45
GTF3C1-204ENST00000564664 Q8N9P0 234 aaPredicted RBP6.02□□□□□ -1.45
GTF3C1-204ENST00000564664 SPINK7P58062 85 aa6.01□□□□□ -1.45
GTF3C1-204ENST00000564664 CXCL6P80162 114 aa6.01□□□□□ -1.45
GTF3C1-204ENST00000564664 KRTAP10-10P60014 251 aa6□□□□□ -1.45
GTF3C1-204ENST00000564664 FAM236AA0A1B0GUQ0 79 aa5.99□□□□□ -1.45
GTF3C1-204ENST00000564664 FAM236BA0A1B0GV22 79 aa5.99□□□□□ -1.45
GTF3C1-204ENST00000564664 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.99□□□□□ -1.45
GTF3C1-204ENST00000564664 A8MWP4 228 aa5.98□□□□□ -1.45
GTF3C1-204ENST00000564664 UQCRQO14949 82 aa5.98□□□□□ -1.45
GTF3C1-204ENST00000564664 MT1FP04733 61 aa5.98□□□□□ -1.45
GTF3C1-204ENST00000564664 KRTAP9-3Q9BYQ3 159 aa5.98□□□□□ -1.45
GTF3C1-204ENST00000564664 Q6ZVQ6 151 aa5.96□□□□□ -1.46
GTF3C1-204ENST00000564664 C8orf17Q9NRJ1 99 aa5.96□□□□□ -1.46
GTF3C1-204ENST00000564664 KRTAP9-7A8MTY7 169 aa5.95□□□□□ -1.46
GTF3C1-204ENST00000564664 COX7CP15954 63 aa5.95□□□□□ -1.46
GTF3C1-204ENST00000564664 SMIM20Q8N5G0 67 aa5.95□□□□□ -1.46
GTF3C1-204ENST00000564664 IGKV3D-7A0A0C4DH55 119 aa5.94□□□□□ -1.46
GTF3C1-204ENST00000564664 SERP2Q8N6R1 65 aa5.93□□□□□ -1.46
GTF3C1-204ENST00000564664 CCDC179H3BU77 68 aa5.91□□□□□ -1.46
GTF3C1-204ENST00000564664 NREPQ16612 68 aa5.91□□□□□ -1.46
GTF3C1-204ENST00000564664 PRR15Q8IV56 129 aa5.91□□□□□ -1.46
GTF3C1-204ENST00000564664 FCGBPQ9Y6R7 5405 aaPredicted RBP5.9□□□□□ -1.46
GTF3C1-204ENST00000564664 KRTAP19-1Q8IUB9 90 aa5.9□□□□□ -1.46
GTF3C1-204ENST00000564664 WFDC13Q8IUB5 93 aa5.89□□□□□ -1.47
GTF3C1-204ENST00000564664 TMEM254Q8TBM7 123 aa5.87□□□□□ -1.47
GTF3C1-204ENST00000564664 MRPL34Q9BQ48 92 aaKnown RBP5.87□□□□□ -1.47
GTF3C1-204ENST00000564664 KRTAP4-8Q9BYQ9 185 aa5.87□□□□□ -1.47
GTF3C1-204ENST00000564664 TRAV7A0A075B6U4 112 aa5.86□□□□□ -1.47
GTF3C1-204ENST00000564664 A0A087WVE0 104 aa5.85□□□□□ -1.47
GTF3C1-204ENST00000564664 MMP24-AS1A0A0U1RRL7 71 aa5.83□□□□□ -1.48
GTF3C1-204ENST00000564664 hDV103S1A0JD37 113 aa5.83□□□□□ -1.48
GTF3C1-204ENST00000564664 BPY2O14599 106 aa5.83□□□□□ -1.48
GTF3C1-204ENST00000564664 H1FX-AS1Q4G0G2 97 aa5.83□□□□□ -1.48
GTF3C1-204ENST00000564664 TMEM258P61165 79 aa5.8□□□□□ -1.48
GTF3C1-204ENST00000564664 KLKP1Q107X0 134 aa5.8□□□□□ -1.48
GTF3C1-204ENST00000564664 KRTAP19-6Q3LI70 58 aa5.8□□□□□ -1.48
GTF3C1-204ENST00000564664 NDUFS5O43920 106 aa5.79□□□□□ -1.48
GTF3C1-204ENST00000564664 RPS28P62857 69 aaKnown RBP5.79□□□□□ -1.48
GTF3C1-204ENST00000564664 K7EQZ3 153 aa5.78□□□□□ -1.48
GTF3C1-204ENST00000564664 NDUFC1O43677 76 aa5.78□□□□□ -1.48
GTF3C1-204ENST00000564664 C7orf65Q6ZTY9 151 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms