RNA–Protein interactions for RNA: ENST00000563911.5

HERPUD1-208, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 844 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-208ENST00000563911 ERC2-IT1O76042 136 aa2.92□□□□□ -1.94
HERPUD1-208ENST00000563911 PPP1R17O96001 155 aa2.92□□□□□ -1.94
HERPUD1-208ENST00000563911 COX7CP15954 63 aa2.92□□□□□ -1.94
HERPUD1-208ENST00000563911 NPC2P61916 151 aa2.92□□□□□ -1.94
HERPUD1-208ENST00000563911 ETDBQ3ZM63 59 aa2.92□□□□□ -1.94
HERPUD1-208ENST00000563911 ATP5L2Q7Z4Y8 100 aa2.92□□□□□ -1.94
HERPUD1-208ENST00000563911 KTN1-AS1Q86SY8 53 aa2.92□□□□□ -1.94
HERPUD1-208ENST00000563911 OSTCQ9NRP0 149 aa2.92□□□□□ -1.94
HERPUD1-208ENST00000563911 TRBV7-7A0A0K0K1E9 115 aa2.91□□□□□ -1.94
HERPUD1-208ENST00000563911 A0A1B0GXF2 115 aa2.91□□□□□ -1.94
HERPUD1-208ENST00000563911 IFI27P40305 119 aaPredicted RBP2.91□□□□□ -1.94
HERPUD1-208ENST00000563911 LINC01545Q5VT33 79 aa2.91□□□□□ -1.94
HERPUD1-208ENST00000563911 SMCR5Q8TEV8 140 aa2.91□□□□□ -1.94
HERPUD1-208ENST00000563911 TRAV9-1A0A075B6T8 112 aa2.9□□□□□ -1.95
HERPUD1-208ENST00000563911 LOC389332A0A1B0GUA5 103 aa2.9□□□□□ -1.95
HERPUD1-208ENST00000563911 SMIM27A0A1W2PRY6 76 aa2.9□□□□□ -1.95
HERPUD1-208ENST00000563911 ATOX1O00244 68 aa2.9□□□□□ -1.95
HERPUD1-208ENST00000563911 MT2AP02795 61 aa2.9□□□□□ -1.95
HERPUD1-208ENST00000563911 SMIM13P0DJ93 91 aa2.9□□□□□ -1.95
HERPUD1-208ENST00000563911 KRTAP10-10P60014 251 aa2.9□□□□□ -1.95
HERPUD1-208ENST00000563911 TEN1Q86WV5 123 aa2.9□□□□□ -1.95
HERPUD1-208ENST00000563911 COX7B2Q8TF08 81 aa2.9□□□□□ -1.95
HERPUD1-208ENST00000563911 SND1-IT1Q9HBX3 110 aa2.9□□□□□ -1.95
HERPUD1-208ENST00000563911 H3BT86 120 aa2.89□□□□□ -1.95
HERPUD1-208ENST00000563911 MT1FP04733 61 aa2.89□□□□□ -1.95
HERPUD1-208ENST00000563911 SRP19P09132 144 aaKnown RBP2.89□□□□□ -1.95
HERPUD1-208ENST00000563911 LGALS3P17931 250 aaKnown RBP2.89□□□□□ -1.95
HERPUD1-208ENST00000563911 RPS29P62273 56 aaKnown RBP2.89□□□□□ -1.95
HERPUD1-208ENST00000563911 BAGE3Q86Y29 109 aa2.89□□□□□ -1.95
HERPUD1-208ENST00000563911 TRAPPC1Q9Y5R8 145 aa2.89□□□□□ -1.95
HERPUD1-208ENST00000563911 SLC25A20O43772 301 aa2.88□□□□□ -1.95
HERPUD1-208ENST00000563911 IGKCP01834 107 aa2.88□□□□□ -1.95
HERPUD1-208ENST00000563911 C3orf79P0CE67 100 aa2.88□□□□□ -1.95
HERPUD1-208ENST00000563911 SPRR1AP35321 89 aa2.88□□□□□ -1.95
HERPUD1-208ENST00000563911 ATP5EP56381 51 aaPredicted RBP2.88□□□□□ -1.95
HERPUD1-208ENST00000563911 PP632Q6XCG6 107 aa2.88□□□□□ -1.95
HERPUD1-208ENST00000563911 SMIM7Q9BQ49 75 aa2.88□□□□□ -1.95
HERPUD1-208ENST00000563911 COX8AP10176 69 aa2.87□□□□□ -1.95
HERPUD1-208ENST00000563911 KRTAP6-3Q3LI67 103 aa2.87□□□□□ -1.95
HERPUD1-208ENST00000563911 COX6B2Q6YFQ2 88 aa2.87□□□□□ -1.95
HERPUD1-208ENST00000563911 SSBP3-AS1Q7Z2R9 100 aa2.87□□□□□ -1.95
HERPUD1-208ENST00000563911 DSCR8Q96T75 97 aa2.87□□□□□ -1.95
HERPUD1-208ENST00000563911 NEBP20929 6669 aa2.86□□□□□ -1.95
HERPUD1-208ENST00000563911 ZNF73O43830 326 aaPredicted RBP2.86□□□□□ -1.95
HERPUD1-208ENST00000563911 Q8N8P6 123 aa2.86□□□□□ -1.95
HERPUD1-208ENST00000563911 C1orf64Q8NEQ6 169 aa2.86□□□□□ -1.95
HERPUD1-208ENST00000563911 ZNF625Q96I27 306 aaPredicted RBP2.86□□□□□ -1.95
HERPUD1-208ENST00000563911 Q9BRP9 147 aa2.86□□□□□ -1.95
HERPUD1-208ENST00000563911 MUC12Q9UKN1 5478 aa2.85□□□□□ -1.95
HERPUD1-208ENST00000563911 TCL1BO95988 128 aa2.85□□□□□ -1.95
HERPUD1-208ENST00000563911 RPL37P61927 97 aaKnown RBP2.85□□□□□ -1.95
HERPUD1-208ENST00000563911 KRTAP19-6Q3LI70 58 aa2.85□□□□□ -1.95
HERPUD1-208ENST00000563911 TOMM6Q96B49 74 aa2.85□□□□□ -1.95
HERPUD1-208ENST00000563911 NDUFA12Q9UI09 145 aa2.85□□□□□ -1.95
HERPUD1-208ENST00000563911 hADV29S1A0JD25 119 aa2.84□□□□□ -1.95
HERPUD1-208ENST00000563911 TMEM256-PLSCR3K7ERE1 68 aa2.84□□□□□ -1.95
HERPUD1-208ENST00000563911 LST1O00453 97 aa2.84□□□□□ -1.95
HERPUD1-208ENST00000563911 IGLV6-57P01721 117 aa2.84□□□□□ -1.95
HERPUD1-208ENST00000563911 SCGB1C2P0DMR2 95 aa2.84□□□□□ -1.95
HERPUD1-208ENST00000563911 MP68P56378 58 aa2.84□□□□□ -1.95
HERPUD1-208ENST00000563911 C2orf91Q6ZV80 131 aa2.84□□□□□ -1.95
HERPUD1-208ENST00000563911 LCA10Q71F78 164 aa2.84□□□□□ -1.95
HERPUD1-208ENST00000563911 FAM19A2Q8N3H0 131 aa2.84□□□□□ -1.95
HERPUD1-208ENST00000563911 KCNQ1DNQ9H478 68 aa2.84□□□□□ -1.95
HERPUD1-208ENST00000563911 ZNF706Q9Y5V0 76 aaPredicted RBP2.84□□□□□ -1.95
HERPUD1-208ENST00000563911 ACYP1P07311 99 aa2.83□□□□□ -1.96
HERPUD1-208ENST00000563911 TMEM170BQ5T4T1 132 aa2.83□□□□□ -1.96
HERPUD1-208ENST00000563911 NXT2Q9NPJ8 142 aaKnown RBP2.83□□□□□ -1.96
HERPUD1-208ENST00000563911 OBSCNQ5VST9 7968 aa2.83□□□□□ -1.96
HERPUD1-208ENST00000563911 TRBV10-3A0A0K0K1G6 114 aa2.82□□□□□ -1.96
HERPUD1-208ENST00000563911 A8MUN3 132 aa2.82□□□□□ -1.96
HERPUD1-208ENST00000563911 NCR3O14931 201 aa2.82□□□□□ -1.96
HERPUD1-208ENST00000563911 TIMM17BO60830 172 aa2.82□□□□□ -1.96
HERPUD1-208ENST00000563911 SERP2Q8N6R1 65 aa2.82□□□□□ -1.96
HERPUD1-208ENST00000563911 HIGD1BQ9P298 99 aa2.82□□□□□ -1.96
HERPUD1-208ENST00000563911 A0A0G2JQZ4 141 aa2.81□□□□□ -1.96
HERPUD1-208ENST00000563911 K7ERJ3 54 aa2.81□□□□□ -1.96
HERPUD1-208ENST00000563911 HBDP02042 147 aa2.81□□□□□ -1.96
HERPUD1-208ENST00000563911 ZNF22P17026 224 aaPredicted RBP2.81□□□□□ -1.96
HERPUD1-208ENST00000563911 SCGB3A1Q96QR1 104 aa2.81□□□□□ -1.96
HERPUD1-208ENST00000563911 C7orf65Q6ZTY9 151 aa2.8□□□□□ -1.96
HERPUD1-208ENST00000563911 ETDCA0A1B0GVM5 59 aa2.79□□□□□ -1.96
HERPUD1-208ENST00000563911 LINC01546A6NGU7 62 aa2.79□□□□□ -1.96
HERPUD1-208ENST00000563911 H7C2G1 150 aa2.79□□□□□ -1.96
HERPUD1-208ENST00000563911 IGKV4-1P06312 121 aa2.79□□□□□ -1.96
HERPUD1-208ENST00000563911 HIST1H4AP62805 103 aaKnown RBP2.79□□□□□ -1.96
HERPUD1-208ENST00000563911 COX17Q14061 63 aa2.79□□□□□ -1.96
HERPUD1-208ENST00000563911 LINC00643Q86TS7 51 aa2.79□□□□□ -1.96
HERPUD1-208ENST00000563911 NHP2Q9NX24 153 aaKnown RBP2.79□□□□□ -1.96
HERPUD1-208ENST00000563911 NDUFC1O43677 76 aa2.78□□□□□ -1.96
HERPUD1-208ENST00000563911 LINC00158P58513 81 aa2.78□□□□□ -1.96
HERPUD1-208ENST00000563911 CHCHD1Q96BP2 118 aaKnown RBP2.78□□□□□ -1.96
HERPUD1-208ENST00000563911 C11orf86A6NJI1 115 aa2.77□□□□□ -1.97
HERPUD1-208ENST00000563911 K7EMI3 77 aa2.77□□□□□ -1.97
HERPUD1-208ENST00000563911 LEPROTL1O95214 131 aa2.77□□□□□ -1.97
HERPUD1-208ENST00000563911 LINC00313P59037 77 aa2.77□□□□□ -1.97
HERPUD1-208ENST00000563911 KRTAP20-1Q3LI63 56 aa2.77□□□□□ -1.97
HERPUD1-208ENST00000563911 Q6ZRX8 168 aa2.77□□□□□ -1.97
HERPUD1-208ENST00000563911 KRTAP5-5Q701N2 237 aaPredicted RBP2.77□□□□□ -1.97
HERPUD1-208ENST00000563911 SPRR1BP22528 89 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms