RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 FAM240AA0A1B0GVK7 77 aa5.41□□□□□ -1.54
SF3B3-204ENST00000563739 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.41□□□□□ -1.54
SF3B3-204ENST00000563739 COX6B2Q6YFQ2 88 aa5.41□□□□□ -1.54
SF3B3-204ENST00000563739 DEFB105AQ8NG35 78 aa5.41□□□□□ -1.54
SF3B3-204ENST00000563739 KRTAP20-1Q3LI63 56 aa5.4□□□□□ -1.54
SF3B3-204ENST00000563739 Q6ZQY7 126 aa5.4□□□□□ -1.54
SF3B3-204ENST00000563739 SIGMAR1Q99720 223 aa5.4□□□□□ -1.54
SF3B3-204ENST00000563739 LAMTOR3Q9UHA4 124 aa5.4□□□□□ -1.54
SF3B3-204ENST00000563739 JMJD7-PLA2G4BH0Y9G9 81 aa5.39□□□□□ -1.55
SF3B3-204ENST00000563739 ACYP1P07311 99 aa5.39□□□□□ -1.55
SF3B3-204ENST00000563739 SMIM29Q86T20 159 aa5.39□□□□□ -1.55
SF3B3-204ENST00000563739 MT2AP02795 61 aa5.38□□□□□ -1.55
SF3B3-204ENST00000563739 KRTAP6-3Q3LI67 103 aa5.38□□□□□ -1.55
SF3B3-204ENST00000563739 HRCT1Q6UXD1 115 aa5.38□□□□□ -1.55
SF3B3-204ENST00000563739 C14orf132Q9NPU4 83 aa5.37□□□□□ -1.55
SF3B3-204ENST00000563739 MT1FP04733 61 aa5.36□□□□□ -1.55
SF3B3-204ENST00000563739 C1orf195Q5TG92 126 aa5.36□□□□□ -1.55
SF3B3-204ENST00000563739 CCKP06307 115 aa5.35□□□□□ -1.55
SF3B3-204ENST00000563739 LIMD2Q9BT23 127 aa5.35□□□□□ -1.55
SF3B3-204ENST00000563739 KRTAP9-3Q9BYQ3 159 aa5.35□□□□□ -1.55
SF3B3-204ENST00000563739 F8WEM9 126 aa5.34□□□□□ -1.55
SF3B3-204ENST00000563739 MT-ATP8P03928 68 aa5.34□□□□□ -1.55
SF3B3-204ENST00000563739 RBM3P98179 157 aaKnown RBP5.34□□□□□ -1.55
SF3B3-204ENST00000563739 LOC110117498A0A087WWA1 95 aa5.33□□□□□ -1.56
SF3B3-204ENST00000563739 A0A1B0GV72 72 aa5.33□□□□□ -1.56
SF3B3-204ENST00000563739 NDUFV3P56181 108 aaKnown RBP5.33□□□□□ -1.56
SF3B3-204ENST00000563739 LCE3BQ5TA77 95 aa5.33□□□□□ -1.56
SF3B3-204ENST00000563739 SCGB1A1P11684 91 aa5.32□□□□□ -1.56
SF3B3-204ENST00000563739 PDE6GP18545 87 aa5.32□□□□□ -1.56
SF3B3-204ENST00000563739 Q5XG85 94 aa5.32□□□□□ -1.56
SF3B3-204ENST00000563739 A0A0G2JQZ4 141 aa5.31□□□□□ -1.56
SF3B3-204ENST00000563739 CD164Q04900 197 aa5.31□□□□□ -1.56
SF3B3-204ENST00000563739 Q6ZQT0 140 aa5.31□□□□□ -1.56
SF3B3-204ENST00000563739 TRBV7-4A0A0J9YYF1 115 aa5.3□□□□□ -1.56
SF3B3-204ENST00000563739 Q6JHZ5 121 aa5.3□□□□□ -1.56
SF3B3-204ENST00000563739 LINC00643Q86TS7 51 aa5.3□□□□□ -1.56
SF3B3-204ENST00000563739 DSCR8Q96T75 97 aa5.3□□□□□ -1.56
SF3B3-204ENST00000563739 LINC00846Q9NV44 126 aa5.29□□□□□ -1.56
SF3B3-204ENST00000563739 MUC12Q9UKN1 5478 aa5.29□□□□□ -1.56
SF3B3-204ENST00000563739 PCP4P48539 62 aa5.28□□□□□ -1.56
SF3B3-204ENST00000563739 Q6Q795 121 aa5.28□□□□□ -1.56
SF3B3-204ENST00000563739 IGFL1Q6UW32 110 aa5.28□□□□□ -1.56
SF3B3-204ENST00000563739 TRBV7-7A0A0K0K1E9 115 aa5.26□□□□□ -1.57
SF3B3-204ENST00000563739 KRTAP19-6Q3LI70 58 aa5.26□□□□□ -1.57
SF3B3-204ENST00000563739 IMUPQ9GZP8 106 aa5.25□□□□□ -1.57
SF3B3-204ENST00000563739 UBL5Q9BZL1 73 aa5.23□□□□□ -1.57
SF3B3-204ENST00000563739 ATP5EP2Q5VTU8 51 aa5.22□□□□□ -1.57
SF3B3-204ENST00000563739 A0A1B0GW54 56 aa5.21□□□□□ -1.58
SF3B3-204ENST00000563739 Q75L30 129 aa5.21□□□□□ -1.58
SF3B3-204ENST00000563739 IGKV3D-7A0A0C4DH55 119 aa5.2□□□□□ -1.58
SF3B3-204ENST00000563739 Q6ZVQ6 151 aa5.2□□□□□ -1.58
SF3B3-204ENST00000563739 A0A1W2PNM2 257 aa5.19□□□□□ -1.58
SF3B3-204ENST00000563739 SS18L2Q9UHA2 77 aa5.18□□□□□ -1.58
SF3B3-204ENST00000563739 A0A087WSZ3 146 aa5.17□□□□□ -1.58
SF3B3-204ENST00000563739 KRTAP9-9Q9BYP9 154 aa5.17□□□□□ -1.58
SF3B3-204ENST00000563739 KRTAP9-4Q9BYQ2 154 aa5.17□□□□□ -1.58
SF3B3-204ENST00000563739 CXCL6P80162 114 aa5.16□□□□□ -1.58
SF3B3-204ENST00000563739 NREPQ16612 68 aa5.16□□□□□ -1.58
SF3B3-204ENST00000563739 KRTAP16-1A8MUX0 517 aa5.15□□□□□ -1.59
SF3B3-204ENST00000563739 KRTAP10-10P60014 251 aa5.15□□□□□ -1.59
SF3B3-204ENST00000563739 HIST1H4AP62805 103 aaKnown RBP5.15□□□□□ -1.59
SF3B3-204ENST00000563739 SVIPQ8NHG7 77 aa5.15□□□□□ -1.59
SF3B3-204ENST00000563739 MPLKIPQ8TAP9 179 aa5.15□□□□□ -1.59
SF3B3-204ENST00000563739 FAM236AA0A1B0GUQ0 79 aa5.14□□□□□ -1.59
SF3B3-204ENST00000563739 FAM236BA0A1B0GV22 79 aa5.14□□□□□ -1.59
SF3B3-204ENST00000563739 ANAPC13Q9BS18 74 aa5.14□□□□□ -1.59
SF3B3-204ENST00000563739 KMT2DO14686 5537 aa5.13□□□□□ -1.59
SF3B3-204ENST00000563739 GPR98Q8WXG9 6306 aa5.13□□□□□ -1.59
SF3B3-204ENST00000563739 ATP11AUNQ6ZP68 121 aa5.13□□□□□ -1.59
SF3B3-204ENST00000563739 A0A087WVE0 104 aa5.12□□□□□ -1.59
SF3B3-204ENST00000563739 Q96NJ1 140 aa5.12□□□□□ -1.59
SF3B3-204ENST00000563739 C20orf166-AS1Q96NR2 134 aa5.12□□□□□ -1.59
SF3B3-204ENST00000563739 A8MUU9 505 aa5.11□□□□□ -1.59
SF3B3-204ENST00000563739 BPY2O14599 106 aa5.11□□□□□ -1.59
SF3B3-204ENST00000563739 ATOX1O00244 68 aa5.09□□□□□ -1.59
SF3B3-204ENST00000563739 HRES1P13985 223 aa5.09□□□□□ -1.59
SF3B3-204ENST00000563739 IGKV4-1P06312 121 aa5.07□□□□□ -1.6
SF3B3-204ENST00000563739 LINC00472Q9H8W2 130 aa5.07□□□□□ -1.6
SF3B3-204ENST00000563739 KRTAP4-8A0A0G2JLE6 195 aa5.06□□□□□ -1.6
SF3B3-204ENST00000563739 DSCR10P59022 87 aa5.05□□□□□ -1.6
SF3B3-204ENST00000563739 MDN1Q9NU22 5596 aa5.04□□□□□ -1.6
SF3B3-204ENST00000563739 CCDC179H3BU77 68 aa5.04□□□□□ -1.6
SF3B3-204ENST00000563739 COX7CP15954 63 aa5.04□□□□□ -1.6
SF3B3-204ENST00000563739 DEFB116Q30KQ4 102 aa5.04□□□□□ -1.6
SF3B3-204ENST00000563739 LCE4AQ5TA78 99 aa5.04□□□□□ -1.6
SF3B3-204ENST00000563739 Q8N9L7 120 aa5.04□□□□□ -1.6
SF3B3-204ENST00000563739 UQCRQO14949 82 aa5.03□□□□□ -1.6
SF3B3-204ENST00000563739 SERP2Q8N6R1 65 aa5.03□□□□□ -1.6
SF3B3-204ENST00000563739 LCE1DQ5T752 114 aa5.02□□□□□ -1.61
SF3B3-204ENST00000563739 SMIM20Q8N5G0 67 aa5.02□□□□□ -1.61
SF3B3-204ENST00000563739 J3KT08 172 aa5.01□□□□□ -1.61
SF3B3-204ENST00000563739 K7EQZ3 153 aa5.01□□□□□ -1.61
SF3B3-204ENST00000563739 TRAV7A0A075B6U4 112 aa5□□□□□ -1.61
SF3B3-204ENST00000563739 KRTAP2-3P0C7H8 128 aa5□□□□□ -1.61
SF3B3-204ENST00000563739 NOTCH2NLQ7Z3S9 236 aa5□□□□□ -1.61
SF3B3-204ENST00000563739 KRTAP2-4Q9BYR9 128 aa5□□□□□ -1.61
SF3B3-204ENST00000563739 IGHV6-1A0A0B4J1U7 121 aa4.99□□□□□ -1.61
SF3B3-204ENST00000563739 A0A1B0GVX0 72 aa4.99□□□□□ -1.61
SF3B3-204ENST00000563739 A8MWP4 228 aa4.98□□□□□ -1.61
SF3B3-204ENST00000563739 LINC00313P59037 77 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms