RNA–Protein interactions for RNA: ENST00000562602.1

CFDP1-202, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 699 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-202ENST00000562602 DEFB116Q30KQ4 102 aa4.57□□□□□ -1.68
CFDP1-202ENST00000562602 RYR3Q15413 4870 aa4.57□□□□□ -1.68
CFDP1-202ENST00000562602 A0A087WTM6 91 aa4.56□□□□□ -1.68
CFDP1-202ENST00000562602 ASB16-AS1Q495Z4 193 aa4.56□□□□□ -1.68
CFDP1-202ENST00000562602 KRTAP11-1Q8IUC1 163 aa4.56□□□□□ -1.68
CFDP1-202ENST00000562602 MPLKIPQ8TAP9 179 aa4.56□□□□□ -1.68
CFDP1-202ENST00000562602 PLAC8Q9NZF1 115 aa4.56□□□□□ -1.68
CFDP1-202ENST00000562602 MMP24-AS1A0A0U1RRL7 71 aa4.55□□□□□ -1.68
CFDP1-202ENST00000562602 ZNF861PO60384 105 aa4.55□□□□□ -1.68
CFDP1-202ENST00000562602 FAM229BQ4G0N7 80 aa4.55□□□□□ -1.68
CFDP1-202ENST00000562602 IGLV5-52A0A0A0MRZ9 124 aa4.54□□□□□ -1.68
CFDP1-202ENST00000562602 CD164Q04900 197 aa4.54□□□□□ -1.68
CFDP1-202ENST00000562602 LIMD2Q9BT23 127 aa4.54□□□□□ -1.68
CFDP1-202ENST00000562602 DYNC2H1Q8NCM8 4307 aaKnown RBP4.54□□□□□ -1.68
CFDP1-202ENST00000562602 IGLV7-46A0A075B6I9 117 aa4.53□□□□□ -1.68
CFDP1-202ENST00000562602 IGLV9-49A0A0B4J1Y8 123 aa4.53□□□□□ -1.68
CFDP1-202ENST00000562602 A0A1B0GVX0 72 aa4.53□□□□□ -1.68
CFDP1-202ENST00000562602 RTL8CO15255 209 aa4.53□□□□□ -1.68
CFDP1-202ENST00000562602 BRK1Q8WUW1 75 aa4.53□□□□□ -1.68
CFDP1-202ENST00000562602 C8orf17Q9NRJ1 99 aa4.53□□□□□ -1.68
CFDP1-202ENST00000562602 Q6ZR54 194 aa4.52□□□□□ -1.69
CFDP1-202ENST00000562602 DNAH9Q9NYC9 4486 aa4.52□□□□□ -1.69
CFDP1-202ENST00000562602 SSBP3-AS1Q7Z2R9 100 aa4.51□□□□□ -1.69
CFDP1-202ENST00000562602 Q96NJ1 140 aa4.51□□□□□ -1.69
CFDP1-202ENST00000562602 PSORS1C2Q9UIG4 136 aa4.51□□□□□ -1.69
CFDP1-202ENST00000562602 C8orf87E5RJ46 101 aa4.5□□□□□ -1.69
CFDP1-202ENST00000562602 PANO1I0J062 215 aa4.5□□□□□ -1.69
CFDP1-202ENST00000562602 C1orf134Q5TEV5 83 aa4.5□□□□□ -1.69
CFDP1-202ENST00000562602 MRPL34Q9BQ48 92 aaKnown RBP4.5□□□□□ -1.69
CFDP1-202ENST00000562602 LOC101927531A0A1B0GV80 90 aa4.48□□□□□ -1.69
CFDP1-202ENST00000562602 IGHV6-1A0A0B4J1U7 121 aa4.47□□□□□ -1.69
CFDP1-202ENST00000562602 NDUFS5O43920 106 aa4.47□□□□□ -1.69
CFDP1-202ENST00000562602 IGLV7-43P04211 117 aa4.47□□□□□ -1.69
CFDP1-202ENST00000562602 PRR4Q16378 134 aa4.47□□□□□ -1.69
CFDP1-202ENST00000562602 Q8N9P0 234 aaPredicted RBP4.46□□□□□ -1.7
CFDP1-202ENST00000562602 COA5Q86WW8 74 aa4.45□□□□□ -1.7
CFDP1-202ENST00000562602 DNAH7Q8WXX0 4024 aa4.45□□□□□ -1.7
CFDP1-202ENST00000562602 DNAH10Q8IVF4 4471 aa4.43□□□□□ -1.7
CFDP1-202ENST00000562602 RYR2Q92736 4967 aa4.43□□□□□ -1.7
CFDP1-202ENST00000562602 PSPHP1O15172 72 aa4.43□□□□□ -1.7
CFDP1-202ENST00000562602 Q75L30 129 aa4.43□□□□□ -1.7
CFDP1-202ENST00000562602 STAB2Q8WWQ8 2551 aa4.43□□□□□ -1.7
CFDP1-202ENST00000562602 A8MUN3 132 aa4.42□□□□□ -1.7
CFDP1-202ENST00000562602 LINC01558Q9Y6Z2 57 aa4.42□□□□□ -1.7
CFDP1-202ENST00000562602 SACSQ9NZJ4 4579 aa4.42□□□□□ -1.7
CFDP1-202ENST00000562602 CHKB-CPT1BH3BT56 60 aa4.41□□□□□ -1.7
CFDP1-202ENST00000562602 PCOTHQ58A44 107 aa4.41□□□□□ -1.7
CFDP1-202ENST00000562602 Q5VV11 94 aa4.41□□□□□ -1.7
CFDP1-202ENST00000562602 LYSTQ99698 3801 aa4.41□□□□□ -1.7
CFDP1-202ENST00000562602 VPS13DQ5THJ4 4388 aa4.41□□□□□ -1.7
CFDP1-202ENST00000562602 ACYP2P14621 99 aa4.4□□□□□ -1.71
CFDP1-202ENST00000562602 CIRBP-AS1Q8TBR5 109 aa4.4□□□□□ -1.71
CFDP1-202ENST00000562602 PRR15LQ9BU68 103 aa4.4□□□□□ -1.71
CFDP1-202ENST00000562602 LINC00313P59037 77 aa4.39□□□□□ -1.71
CFDP1-202ENST00000562602 EPPK1P58107 5090 aaKnown RBP4.38□□□□□ -1.71
CFDP1-202ENST00000562602 ATP11AUNQ6ZP68 121 aa4.38□□□□□ -1.71
CFDP1-202ENST00000562602 CSMD3Q7Z407 3707 aa4.38□□□□□ -1.71
CFDP1-202ENST00000562602 PLECQ15149 4684 aaKnown RBP4.37□□□□□ -1.71
CFDP1-202ENST00000562602 STARD9Q9P2P6 4700 aa4.37□□□□□ -1.71
CFDP1-202ENST00000562602 LY6G6CO95867 125 aa4.37□□□□□ -1.71
CFDP1-202ENST00000562602 SPINK6Q6UWN8 80 aa4.37□□□□□ -1.71
CFDP1-202ENST00000562602 ANAPC11Q9NYG5 84 aa4.37□□□□□ -1.71
CFDP1-202ENST00000562602 KRTAP13-3Q3SY46 172 aa4.36□□□□□ -1.71
CFDP1-202ENST00000562602 DNAH17Q9UFH2 4485 aa4.35□□□□□ -1.71
CFDP1-202ENST00000562602 A6NED7 52 aa4.35□□□□□ -1.71
CFDP1-202ENST00000562602 HRES1P13985 223 aa4.35□□□□□ -1.71
CFDP1-202ENST00000562602 PMAIP1Q13794 54 aa4.35□□□□□ -1.71
CFDP1-202ENST00000562602 Q6ZSA8 131 aa4.35□□□□□ -1.71
CFDP1-202ENST00000562602 BIRC6Q9NR09 4857 aa4.35□□□□□ -1.71
CFDP1-202ENST00000562602 HYDINQ4G0P3 5121 aa4.34□□□□□ -1.71
CFDP1-202ENST00000562602 A0A087X002 238 aa4.34□□□□□ -1.71
CFDP1-202ENST00000562602 NOTCH2NLQ7Z3S9 236 aa4.34□□□□□ -1.71
CFDP1-202ENST00000562602 CDC42SE1Q9NRR8 79 aa4.34□□□□□ -1.71
CFDP1-202ENST00000562602 TENM2Q9NT68 2774 aa4.33□□□□□ -1.72
CFDP1-202ENST00000562602 SPAG11AQ6PDA7 123 aa4.33□□□□□ -1.72
CFDP1-202ENST00000562602 DMAC1Q96GE9 116 aa4.33□□□□□ -1.72
CFDP1-202ENST00000562602 SPINK1P00995 79 aa4.32□□□□□ -1.72
CFDP1-202ENST00000562602 RPS29P62273 56 aaKnown RBP4.32□□□□□ -1.72
CFDP1-202ENST00000562602 DNAH6Q9C0G6 4158 aa4.31□□□□□ -1.72
CFDP1-202ENST00000562602 HECTD4Q9Y4D8 3996 aa4.31□□□□□ -1.72
CFDP1-202ENST00000562602 IGKV2-30P06310 120 aa4.31□□□□□ -1.72
CFDP1-202ENST00000562602 Q5W150 140 aa4.31□□□□□ -1.72
CFDP1-202ENST00000562602 PRR26Q8N8Z3 221 aa4.31□□□□□ -1.72
CFDP1-202ENST00000562602 DNAH2Q9P225 4427 aa4.31□□□□□ -1.72
CFDP1-202ENST00000562602 KRTAP13-2Q52LG2 175 aa4.29□□□□□ -1.72
CFDP1-202ENST00000562602 LCE1AQ5T7P2 110 aa4.29□□□□□ -1.72
CFDP1-202ENST00000562602 DNAH8Q96JB1 4490 aa4.28□□□□□ -1.72
CFDP1-202ENST00000562602 SRRM2Q9UQ35 2752 aaKnown RBP4.27□□□□□ -1.73
CFDP1-202ENST00000562602 KRTAP10-1P60331 282 aa4.27□□□□□ -1.73
CFDP1-202ENST00000562602 LCA10Q71F78 164 aa4.27□□□□□ -1.73
CFDP1-202ENST00000562602 TYMSOSQ8TAI1 123 aa4.27□□□□□ -1.73
CFDP1-202ENST00000562602 FRAS1Q86XX4 4008 aa4.26□□□□□ -1.73
CFDP1-202ENST00000562602 KRTAP16-1A8MUX0 517 aa4.26□□□□□ -1.73
CFDP1-202ENST00000562602 KRTAP1-4P0C5Y4 121 aa4.26□□□□□ -1.73
CFDP1-202ENST00000562602 SPTSSBQ8NFR3 76 aa4.26□□□□□ -1.73
CFDP1-202ENST00000562602 KTN1-AS1Q86SY8 53 aa4.25□□□□□ -1.73
CFDP1-202ENST00000562602 ALMS1Q8TCU4 4167 aa4.24□□□□□ -1.73
CFDP1-202ENST00000562602 A0A1B0GU69 56 aa4.24□□□□□ -1.73
CFDP1-202ENST00000562602 DNAH11Q96DT5 4516 aa4.23□□□□□ -1.73
CFDP1-202ENST00000562602 IGKV2D-30A0A075B6S6 120 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms