RNA–Protein interactions for RNA: ENST00000562028.1

DENND4A-204, Transcript of DENN domain containing 4A, humanhuman

TSL 3

Gene DENND4A, Length 481 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-204ENST00000562028 H0YGG7 62 aa0.7□□□□□ -2.3
DENND4A-204ENST00000562028 CHKB-CPT1BH3BT56 60 aa0.7□□□□□ -2.3
DENND4A-204ENST00000562028 HMGN4O00479 90 aa0.7□□□□□ -2.3
DENND4A-204ENST00000562028 SAA2P0DJI9 122 aaPredicted RBP0.7□□□□□ -2.3
DENND4A-204ENST00000562028 CCL18P55774 89 aa0.7□□□□□ -2.3
DENND4A-204ENST00000562028 SMIM11BQ8TCY0 68 aa0.7□□□□□ -2.3
DENND4A-204ENST00000562028 CDC42SE2Q9NRR3 84 aa0.7□□□□□ -2.3
DENND4A-204ENST00000562028 LINC00474Q9P2X8 69 aa0.7□□□□□ -2.3
DENND4A-204ENST00000562028 CACFD1Q9UGQ2 172 aa0.7□□□□□ -2.3
DENND4A-204ENST00000562028 A0A087WTM6 91 aa0.69□□□□□ -2.3
DENND4A-204ENST00000562028 TRAV22A0A0B4J277 110 aa0.69□□□□□ -2.3
DENND4A-204ENST00000562028 F8VRH5 84 aa0.69□□□□□ -2.3
DENND4A-204ENST00000562028 ACYP2P14621 99 aa0.69□□□□□ -2.3
DENND4A-204ENST00000562028 HMGN3Q15651 99 aa0.69□□□□□ -2.3
DENND4A-204ENST00000562028 PMCHL1Q16048 86 aa0.69□□□□□ -2.3
DENND4A-204ENST00000562028 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.69□□□□□ -2.3
DENND4A-204ENST00000562028 VMO1Q7Z5L0 202 aa0.69□□□□□ -2.3
DENND4A-204ENST00000562028 BAGE2Q86Y30 109 aa0.69□□□□□ -2.3
DENND4A-204ENST00000562028 C10orf95Q9H7T3 257 aa0.69□□□□□ -2.3
DENND4A-204ENST00000562028 TRBV25-1A0A075B6N4 114 aa0.68□□□□□ -2.3
DENND4A-204ENST00000562028 CTXND1A0A1B0GTU2 59 aa0.68□□□□□ -2.3
DENND4A-204ENST00000562028 SYS1-DBNDD2H3BUS1 97 aa0.68□□□□□ -2.3
DENND4A-204ENST00000562028 M0R135 149 aa0.68□□□□□ -2.3
DENND4A-204ENST00000562028 MGPP08493 103 aa0.68□□□□□ -2.3
DENND4A-204ENST00000562028 HTN3P15516 51 aa0.68□□□□□ -2.3
DENND4A-204ENST00000562028 FAUP35544 74 aaKnown RBP0.68□□□□□ -2.3
DENND4A-204ENST00000562028 RPL37P61927 97 aaKnown RBP0.68□□□□□ -2.3
DENND4A-204ENST00000562028 ALKAL2Q6UX46 152 aa0.68□□□□□ -2.3
DENND4A-204ENST00000562028 ZNF720Q7Z2F6 126 aa0.68□□□□□ -2.3
DENND4A-204ENST00000562028 DEFB106AQ8N104 65 aa0.68□□□□□ -2.3
DENND4A-204ENST00000562028 FAM213BQ8TBF2 198 aa0.68□□□□□ -2.3
DENND4A-204ENST00000562028 PLAC4Q8WY50 150 aa0.68□□□□□ -2.3
DENND4A-204ENST00000562028 SPRR2FQ96RM1 72 aa0.68□□□□□ -2.3
DENND4A-204ENST00000562028 S100A13Q99584 98 aa0.68□□□□□ -2.3
DENND4A-204ENST00000562028 NPVFQ9HCQ7 196 aa0.68□□□□□ -2.3
DENND4A-204ENST00000562028 NXT2Q9NPJ8 142 aaKnown RBP0.68□□□□□ -2.3
DENND4A-204ENST00000562028 LINC01558Q9Y6Z2 57 aa0.68□□□□□ -2.3
DENND4A-204ENST00000562028 FLGP20930 4061 aaPredicted RBP0.68□□□□□ -2.3
DENND4A-204ENST00000562028 TRGV1A0A0A0MS02 117 aa0.67□□□□□ -2.3
DENND4A-204ENST00000562028 TRAV1-2A0A0B4J238 106 aa0.67□□□□□ -2.3
DENND4A-204ENST00000562028 IGLC7A0M8Q6 106 aa0.67□□□□□ -2.3
DENND4A-204ENST00000562028 H7BZZ5 65 aa0.67□□□□□ -2.3
DENND4A-204ENST00000562028 K7EP34 96 aa0.67□□□□□ -2.3
DENND4A-204ENST00000562028 CYB5AP00167 134 aa0.67□□□□□ -2.3
DENND4A-204ENST00000562028 S100A3P33764 101 aa0.67□□□□□ -2.3
DENND4A-204ENST00000562028 SPINT3P49223 89 aa0.67□□□□□ -2.3
DENND4A-204ENST00000562028 Q96NJ1 140 aa0.67□□□□□ -2.3
DENND4A-204ENST00000562028 PRR15LQ9BU68 103 aa0.67□□□□□ -2.3
DENND4A-204ENST00000562028 DEFB131BA0A096LNP1 70 aa0.66□□□□□ -2.3
DENND4A-204ENST00000562028 A0A1B0GWA3 101 aa0.66□□□□□ -2.3
DENND4A-204ENST00000562028 KANTRA0A1W2PQU2 76 aa0.66□□□□□ -2.3
DENND4A-204ENST00000562028 ZNF815PA8K554 130 aa0.66□□□□□ -2.3
DENND4A-204ENST00000562028 ACYP1P07311 99 aa0.66□□□□□ -2.3
DENND4A-204ENST00000562028 GCHFRP30047 84 aa0.66□□□□□ -2.3
DENND4A-204ENST00000562028 PEA15Q15121 130 aa0.66□□□□□ -2.3
DENND4A-204ENST00000562028 SPINK9Q5DT21 86 aa0.66□□□□□ -2.3
DENND4A-204ENST00000562028 PSMG4Q5JS54 123 aa0.66□□□□□ -2.3
DENND4A-204ENST00000562028 CFAP126Q5VTH2 177 aa0.66□□□□□ -2.3
DENND4A-204ENST00000562028 S100A16Q96FQ6 103 aaKnown RBP0.66□□□□□ -2.3
DENND4A-204ENST00000562028 ARL2-SNX15V9GYD0 113 aa0.66□□□□□ -2.3
DENND4A-204ENST00000562028 GVQW2A0A096LPI5 108 aaPredicted RBP0.65□□□□□ -2.31
DENND4A-204ENST00000562028 A0A0G2JND7 137 aa0.65□□□□□ -2.31
DENND4A-204ENST00000562028 ZNF137PP52743 207 aa0.65□□□□□ -2.31
DENND4A-204ENST00000562028 SNRPFP62306 86 aaKnown RBP0.65□□□□□ -2.31
DENND4A-204ENST00000562028 KRTAP21-1Q3LI58 79 aa0.65□□□□□ -2.31
DENND4A-204ENST00000562028 Q6ZRX8 168 aa0.65□□□□□ -2.31
DENND4A-204ENST00000562028 FAM223AQ8IWN6 122 aa0.65□□□□□ -2.31
DENND4A-204ENST00000562028 TMEM263Q8WUH6 116 aaKnown RBP0.65□□□□□ -2.31
DENND4A-204ENST00000562028 LINC01600Q96MT4 127 aa0.65□□□□□ -2.31
DENND4A-204ENST00000562028 PRO1933Q9H354 126 aa0.65□□□□□ -2.31
DENND4A-204ENST00000562028 CCL22O00626 93 aa0.64□□□□□ -2.31
DENND4A-204ENST00000562028 KRTAP19-2Q3LHN2 52 aa0.64□□□□□ -2.31
DENND4A-204ENST00000562028 ETDBQ3ZM63 59 aa0.64□□□□□ -2.31
DENND4A-204ENST00000562028 SPRR4Q96PI1 79 aa0.64□□□□□ -2.31
DENND4A-204ENST00000562028 C20orf78Q9BR46 151 aa0.64□□□□□ -2.31
DENND4A-204ENST00000562028 FAM223BA6NKX1 122 aa0.63□□□□□ -2.31
DENND4A-204ENST00000562028 H3BQF6 201 aa0.63□□□□□ -2.31
DENND4A-204ENST00000562028 HMGN2P05204 90 aaKnown RBP0.63□□□□□ -2.31
DENND4A-204ENST00000562028 ADIRFQ15847 76 aa0.63□□□□□ -2.31
DENND4A-204ENST00000562028 COX6B2Q6YFQ2 88 aa0.63□□□□□ -2.31
DENND4A-204ENST00000562028 LINC00643Q86TS7 51 aa0.63□□□□□ -2.31
DENND4A-204ENST00000562028 C7orf77A4D0Y5 90 aa0.62□□□□□ -2.31
DENND4A-204ENST00000562028 MT1FP04733 61 aa0.62□□□□□ -2.31
DENND4A-204ENST00000562028 NMBP08949 121 aa0.62□□□□□ -2.31
DENND4A-204ENST00000562028 ARMS2P0C7Q2 107 aa0.62□□□□□ -2.31
DENND4A-204ENST00000562028 SFTA2Q6UW10 78 aa0.62□□□□□ -2.31
DENND4A-204ENST00000562028 ST20Q9HBF5 79 aa0.62□□□□□ -2.31
DENND4A-204ENST00000562028 HILPDAQ9Y5L2 63 aa0.62□□□□□ -2.31
DENND4A-204ENST00000562028 TRBV6-1A0A0K0K1D8 114 aa0.61□□□□□ -2.31
DENND4A-204ENST00000562028 D6R8Y8 96 aa0.61□□□□□ -2.31
DENND4A-204ENST00000562028 MT2AP02795 61 aa0.61□□□□□ -2.31
DENND4A-204ENST00000562028 Q6JHZ5 121 aa0.61□□□□□ -2.31
DENND4A-204ENST00000562028 MUSTN1Q8IVN3 82 aa0.61□□□□□ -2.31
DENND4A-204ENST00000562028 LINC00472Q9H8W2 130 aa0.61□□□□□ -2.31
DENND4A-204ENST00000562028 PLAC8Q9NZF1 115 aa0.61□□□□□ -2.31
DENND4A-204ENST00000562028 HIGD1BQ9P298 99 aa0.61□□□□□ -2.31
DENND4A-204ENST00000562028 SPCS1Q9Y6A9 102 aa0.61□□□□□ -2.31
DENND4A-204ENST00000562028 F8WEM9 126 aa0.6□□□□□ -2.31
DENND4A-204ENST00000562028 G3V318 75 aa0.6□□□□□ -2.31
DENND4A-204ENST00000562028 M0R3E3 92 aa0.6□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 112.3 ms