RNA–Protein interactions for RNA: ENST00000561751.1

CDH1-203, Transcript of cadherin 1, humanhuman

TSL 4

Gene CDH1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-203ENST00000561751 NOTCH3Q9UM47 2321 aa4.53□□□□□ -1.68
CDH1-203ENST00000561751 KMT2CQ8NEZ4 4911 aaKnown RBP4.52□□□□□ -1.69
CDH1-203ENST00000561751 IGKV2-24A0A0C4DH68 120 aa4.52□□□□□ -1.69
CDH1-203ENST00000561751 MMP24-AS1A0A0U1RRL7 71 aa4.52□□□□□ -1.69
CDH1-203ENST00000561751 ACYP2P14621 99 aa4.52□□□□□ -1.69
CDH1-203ENST00000561751 KRTAP10-3P60369 221 aa4.52□□□□□ -1.69
CDH1-203ENST00000561751 C15orf56Q8N910 161 aa4.52□□□□□ -1.69
CDH1-203ENST00000561751 A0A087WSZ3 146 aa4.51□□□□□ -1.69
CDH1-203ENST00000561751 PRB2P02812 416 aaPredicted RBP4.51□□□□□ -1.69
CDH1-203ENST00000561751 PRAC1Q96KF2 57 aa4.51□□□□□ -1.69
CDH1-203ENST00000561751 UQCR11O14957 56 aa4.5□□□□□ -1.69
CDH1-203ENST00000561751 CMYA5Q8N3K9 4069 aa4.49□□□□□ -1.69
CDH1-203ENST00000561751 A0A096LPF7 62 aa4.49□□□□□ -1.69
CDH1-203ENST00000561751 RPL37AP61513 92 aaKnown RBP4.49□□□□□ -1.69
CDH1-203ENST00000561751 DEFB116Q30KQ4 102 aa4.49□□□□□ -1.69
CDH1-203ENST00000561751 RYR3Q15413 4870 aa4.49□□□□□ -1.69
CDH1-203ENST00000561751 SPART-AS1P0CW21 52 aa4.48□□□□□ -1.69
CDH1-203ENST00000561751 REG3GQ6UW15 175 aa4.48□□□□□ -1.69
CDH1-203ENST00000561751 MIR22HGQ0VDD5 57 aa4.47□□□□□ -1.69
CDH1-203ENST00000561751 TENM3Q9P273 2699 aa4.46□□□□□ -1.7
CDH1-203ENST00000561751 IGHV6-1A0A0B4J1U7 121 aa4.46□□□□□ -1.7
CDH1-203ENST00000561751 A0A1B0GU69 56 aa4.45□□□□□ -1.7
CDH1-203ENST00000561751 PCOTHQ58A44 107 aa4.45□□□□□ -1.7
CDH1-203ENST00000561751 SORL1Q92673 2214 aa4.45□□□□□ -1.7
CDH1-203ENST00000561751 LINC01556Q5JQF7 62 aa4.44□□□□□ -1.7
CDH1-203ENST00000561751 ADM2Q7Z4H4 148 aa4.44□□□□□ -1.7
CDH1-203ENST00000561751 C8orf17Q9NRJ1 99 aa4.44□□□□□ -1.7
CDH1-203ENST00000561751 CSAG1Q6PB30 78 aa4.43□□□□□ -1.7
CDH1-203ENST00000561751 DMAC1Q96GE9 116 aa4.43□□□□□ -1.7
CDH1-203ENST00000561751 MRPL34Q9BQ48 92 aaKnown RBP4.42□□□□□ -1.7
CDH1-203ENST00000561751 ROMO1P60602 79 aa4.41□□□□□ -1.7
CDH1-203ENST00000561751 ZNF861PO60384 105 aa4.4□□□□□ -1.71
CDH1-203ENST00000561751 C1orf134Q5TEV5 83 aa4.4□□□□□ -1.71
CDH1-203ENST00000561751 A0A1B0GVX0 72 aa4.39□□□□□ -1.71
CDH1-203ENST00000561751 KRTAP7-1Q8IUC3 87 aa4.39□□□□□ -1.71
CDH1-203ENST00000561751 KRTAP13-3Q3SY46 172 aa4.38□□□□□ -1.71
CDH1-203ENST00000561751 DNAH3Q8TD57 4116 aa4.37□□□□□ -1.71
CDH1-203ENST00000561751 FAM168BA1KXE4 195 aa4.37□□□□□ -1.71
CDH1-203ENST00000561751 DNAH10OSP0CZ25 163 aa4.37□□□□□ -1.71
CDH1-203ENST00000561751 KRTAP25-1Q3LHN0 102 aa4.37□□□□□ -1.71
CDH1-203ENST00000561751 Q96NJ1 140 aa4.37□□□□□ -1.71
CDH1-203ENST00000561751 ZNF706Q9Y5V0 76 aaPredicted RBP4.37□□□□□ -1.71
CDH1-203ENST00000561751 IGLV7-43P04211 117 aa4.36□□□□□ -1.71
CDH1-203ENST00000561751 EPPK1P58107 5090 aaKnown RBP4.36□□□□□ -1.71
CDH1-203ENST00000561751 COL7A1Q02388 2944 aa4.35□□□□□ -1.71
CDH1-203ENST00000561751 CDK2AP2O75956 126 aa4.35□□□□□ -1.71
CDH1-203ENST00000561751 KRTAP10-11P60412 298 aa4.35□□□□□ -1.71
CDH1-203ENST00000561751 BIRC6Q9NR09 4857 aa4.34□□□□□ -1.71
CDH1-203ENST00000561751 STAB2Q8WWQ8 2551 aa4.34□□□□□ -1.71
CDH1-203ENST00000561751 K7EIL1 84 aa4.31□□□□□ -1.72
CDH1-203ENST00000561751 DEFB135Q30KP9 77 aa4.31□□□□□ -1.72
CDH1-203ENST00000561751 DNAH9Q9NYC9 4486 aa4.31□□□□□ -1.72
CDH1-203ENST00000561751 DYNC2H1Q8NCM8 4307 aaKnown RBP4.3□□□□□ -1.72
CDH1-203ENST00000561751 RYR2Q92736 4967 aa4.3□□□□□ -1.72
CDH1-203ENST00000561751 A0A0G2JQZ4 141 aa4.3□□□□□ -1.72
CDH1-203ENST00000561751 A0A1W2PNN7 141 aa4.3□□□□□ -1.72
CDH1-203ENST00000561751 HTN3P15516 51 aa4.3□□□□□ -1.72
CDH1-203ENST00000561751 TENM2Q9NT68 2774 aa4.29□□□□□ -1.72
CDH1-203ENST00000561751 A8MUU9 505 aa4.29□□□□□ -1.72
CDH1-203ENST00000561751 LINC00483Q53H64 154 aa4.29□□□□□ -1.72
CDH1-203ENST00000561751 ALMS1Q8TCU4 4167 aa4.28□□□□□ -1.72
CDH1-203ENST00000561751 PRLHP81277 87 aa4.28□□□□□ -1.72
CDH1-203ENST00000561751 DEFB4AO15263 64 aa4.27□□□□□ -1.73
CDH1-203ENST00000561751 LY6G6CO95867 125 aa4.27□□□□□ -1.73
CDH1-203ENST00000561751 IGKV2-30P06310 120 aa4.26□□□□□ -1.73
CDH1-203ENST00000561751 KRTAP13-1Q8IUC0 172 aa4.26□□□□□ -1.73
CDH1-203ENST00000561751 ANAPC11Q9NYG5 84 aa4.26□□□□□ -1.73
CDH1-203ENST00000561751 DNAH1Q9P2D7 4330 aa4.25□□□□□ -1.73
CDH1-203ENST00000561751 IGLV5-52A0A0A0MRZ9 124 aa4.25□□□□□ -1.73
CDH1-203ENST00000561751 C14orf177Q52M58 125 aa4.25□□□□□ -1.73
CDH1-203ENST00000561751 Q5W150 140 aa4.25□□□□□ -1.73
CDH1-203ENST00000561751 SACSQ9NZJ4 4579 aa4.25□□□□□ -1.73
CDH1-203ENST00000561751 HUWE1Q7Z6Z7 4374 aaKnown RBP4.24□□□□□ -1.73
CDH1-203ENST00000561751 HYDINQ4G0P3 5121 aa4.23□□□□□ -1.73
CDH1-203ENST00000561751 LINC00304Q8N9R0 145 aa4.22□□□□□ -1.73
CDH1-203ENST00000561751 IGKV2D-30A0A075B6S6 120 aa4.21□□□□□ -1.74
CDH1-203ENST00000561751 A0A096LNI7 61 aa4.21□□□□□ -1.74
CDH1-203ENST00000561751 PANO1I0J062 215 aa4.2□□□□□ -1.74
CDH1-203ENST00000561751 K7ERS5 55 aa4.2□□□□□ -1.74
CDH1-203ENST00000561751 CASC10Q5T4H9 136 aa4.2□□□□□ -1.74
CDH1-203ENST00000561751 PCLOQ9Y6V0 5065 aa4.2□□□□□ -1.74
CDH1-203ENST00000561751 NUPR2A6NF83 97 aa4.19□□□□□ -1.74
CDH1-203ENST00000561751 P0C880 135 aa4.19□□□□□ -1.74
CDH1-203ENST00000561751 CHTF8P0CG12 524 aa4.19□□□□□ -1.74
CDH1-203ENST00000561751 DNAH7Q8WXX0 4024 aa4.17□□□□□ -1.74
CDH1-203ENST00000561751 LYSTQ99698 3801 aa4.17□□□□□ -1.74
CDH1-203ENST00000561751 KRTAP16-1A8MUX0 517 aa4.16□□□□□ -1.74
CDH1-203ENST00000561751 LCE1AQ5T7P2 110 aa4.16□□□□□ -1.74
CDH1-203ENST00000561751 KRTAP11-1Q8IUC1 163 aa4.16□□□□□ -1.74
CDH1-203ENST00000561751 HERC2O95714 4834 aa4.16□□□□□ -1.74
CDH1-203ENST00000561751 A0A0A0MQY5 61 aa4.15□□□□□ -1.75
CDH1-203ENST00000561751 SSBP3-AS1Q7Z2R9 100 aa4.15□□□□□ -1.75
CDH1-203ENST00000561751 CSMD3Q7Z407 3707 aa4.15□□□□□ -1.75
CDH1-203ENST00000561751 Q6ZSA8 131 aa4.14□□□□□ -1.75
CDH1-203ENST00000561751 C20orf166-AS1Q96NR2 134 aa4.13□□□□□ -1.75
CDH1-203ENST00000561751 PLECQ15149 4684 aaKnown RBP4.13□□□□□ -1.75
CDH1-203ENST00000561751 STARD9Q9P2P6 4700 aa4.13□□□□□ -1.75
CDH1-203ENST00000561751 IGLV9-49A0A0B4J1Y8 123 aa4.12□□□□□ -1.75
CDH1-203ENST00000561751 A0A1B0GU33 70 aa4.12□□□□□ -1.75
CDH1-203ENST00000561751 H0YAA0 97 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms