RNA–Protein interactions for RNA: ENST00000561643.5

NEIL1-202, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 5

Gene NEIL1, Length 3,271 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-202ENST00000561643 A0A087WTM6 91 aa6.67□□□□□ -1.34
NEIL1-202ENST00000561643 H3BPC8 53 aa6.65□□□□□ -1.34
NEIL1-202ENST00000561643 RTL8CO15255 209 aa6.64□□□□□ -1.35
NEIL1-202ENST00000561643 IGLV7-46A0A075B6I9 117 aa6.62□□□□□ -1.35
NEIL1-202ENST00000561643 MMP24-AS1A0A0U1RRL7 71 aa6.62□□□□□ -1.35
NEIL1-202ENST00000561643 STARD9Q9P2P6 4700 aa6.62□□□□□ -1.35
NEIL1-202ENST00000561643 PSORS1C2Q9UIG4 136 aa6.62□□□□□ -1.35
NEIL1-202ENST00000561643 ZNF706Q9Y5V0 76 aaPredicted RBP6.62□□□□□ -1.35
NEIL1-202ENST00000561643 VPS13DQ5THJ4 4388 aa6.61□□□□□ -1.35
NEIL1-202ENST00000561643 LINC00483Q53H64 154 aa6.61□□□□□ -1.35
NEIL1-202ENST00000561643 LINC01558Q9Y6Z2 57 aa6.61□□□□□ -1.35
NEIL1-202ENST00000561643 IGLV5-52A0A0A0MRZ9 124 aa6.6□□□□□ -1.35
NEIL1-202ENST00000561643 Q96NJ1 140 aa6.59□□□□□ -1.35
NEIL1-202ENST00000561643 ANAPC11Q9NYG5 84 aa6.59□□□□□ -1.35
NEIL1-202ENST00000561643 KRTAP21-3Q3LHN1 58 aa6.58□□□□□ -1.36
NEIL1-202ENST00000561643 WWC2-AS2Q96NR7 200 aa6.58□□□□□ -1.36
NEIL1-202ENST00000561643 LY6G6CO95867 125 aa6.58□□□□□ -1.36
NEIL1-202ENST00000561643 PLAC8Q9NZF1 115 aa6.58□□□□□ -1.36
NEIL1-202ENST00000561643 ZNF861PO60384 105 aa6.57□□□□□ -1.36
NEIL1-202ENST00000561643 CDK2AP2O75956 126 aa6.56□□□□□ -1.36
NEIL1-202ENST00000561643 Q6ZR54 194 aa6.56□□□□□ -1.36
NEIL1-202ENST00000561643 IGHV6-1A0A0B4J1U7 121 aa6.56□□□□□ -1.36
NEIL1-202ENST00000561643 RETNLBQ9BQ08 111 aa6.56□□□□□ -1.36
NEIL1-202ENST00000561643 C8orf17Q9NRJ1 99 aa6.56□□□□□ -1.36
NEIL1-202ENST00000561643 PRKDCP78527 4128 aaKnown RBP6.55□□□□□ -1.36
NEIL1-202ENST00000561643 HRES1P13985 223 aa6.54□□□□□ -1.36
NEIL1-202ENST00000561643 C1orf134Q5TEV5 83 aa6.54□□□□□ -1.36
NEIL1-202ENST00000561643 TP53AIP1Q9HCN2 124 aa6.54□□□□□ -1.36
NEIL1-202ENST00000561643 A0A1B0GVX0 72 aa6.53□□□□□ -1.36
NEIL1-202ENST00000561643 HECTD4Q9Y4D8 3996 aa6.53□□□□□ -1.36
NEIL1-202ENST00000561643 DNAH8Q96JB1 4490 aa6.53□□□□□ -1.36
NEIL1-202ENST00000561643 DNAH17Q9UFH2 4485 aa6.53□□□□□ -1.36
NEIL1-202ENST00000561643 DNAH2Q9P225 4427 aa6.53□□□□□ -1.36
NEIL1-202ENST00000561643 ASB16-AS1Q495Z4 193 aa6.52□□□□□ -1.37
NEIL1-202ENST00000561643 CSAG1Q6PB30 78 aa6.52□□□□□ -1.37
NEIL1-202ENST00000561643 KMT2AQ03164 3969 aa6.52□□□□□ -1.37
NEIL1-202ENST00000561643 FRAS1Q86XX4 4008 aa6.5□□□□□ -1.37
NEIL1-202ENST00000561643 IGLV7-43P04211 117 aa6.49□□□□□ -1.37
NEIL1-202ENST00000561643 SPINK6Q6UWN8 80 aa6.49□□□□□ -1.37
NEIL1-202ENST00000561643 MRPL34Q9BQ48 92 aaKnown RBP6.49□□□□□ -1.37
NEIL1-202ENST00000561643 CIRBP-AS1Q8TBR5 109 aa6.48□□□□□ -1.37
NEIL1-202ENST00000561643 FLG2Q5D862 2391 aaPredicted RBP6.48□□□□□ -1.37
NEIL1-202ENST00000561643 A0A087X002 238 aa6.47□□□□□ -1.37
NEIL1-202ENST00000561643 NOTCH2NLQ7Z3S9 236 aa6.47□□□□□ -1.37
NEIL1-202ENST00000561643 PLA2G1BP04054 148 aaKnown RBP6.43□□□□□ -1.38
NEIL1-202ENST00000561643 KRTAP10-2P60368 255 aa6.42□□□□□ -1.38
NEIL1-202ENST00000561643 SSBP3-AS1Q7Z2R9 100 aa6.41□□□□□ -1.38
NEIL1-202ENST00000561643 DNAH11Q96DT5 4516 aa6.39□□□□□ -1.39
NEIL1-202ENST00000561643 Q5W150 140 aa6.37□□□□□ -1.39
NEIL1-202ENST00000561643 DNAH6Q9C0G6 4158 aa6.37□□□□□ -1.39
NEIL1-202ENST00000561643 DNAH5Q8TE73 4624 aa6.37□□□□□ -1.39
NEIL1-202ENST00000561643 ALMS1Q8TCU4 4167 aa6.35□□□□□ -1.39
NEIL1-202ENST00000561643 A0A1B0GU69 56 aa6.33□□□□□ -1.4
NEIL1-202ENST00000561643 KRTAP10-1P60331 282 aa6.33□□□□□ -1.4
NEIL1-202ENST00000561643 KRTAP13-2Q52LG2 175 aa6.33□□□□□ -1.4
NEIL1-202ENST00000561643 KRTAP13-3Q3SY46 172 aa6.32□□□□□ -1.4
NEIL1-202ENST00000561643 ACYP2P14621 99 aa6.31□□□□□ -1.4
NEIL1-202ENST00000561643 Q6ZSA8 131 aa6.3□□□□□ -1.4
NEIL1-202ENST00000561643 SPATA8Q6RVD6 105 aa6.3□□□□□ -1.4
NEIL1-202ENST00000561643 CRIPTQ9P021 101 aa6.3□□□□□ -1.4
NEIL1-202ENST00000561643 LRP1BQ9NZR2 4599 aa6.29□□□□□ -1.4
NEIL1-202ENST00000561643 MIR22HGQ0VDD5 57 aa6.29□□□□□ -1.4
NEIL1-202ENST00000561643 FAM229AH3BQW9 127 aa6.28□□□□□ -1.4
NEIL1-202ENST00000561643 KRTAP1-4P0C5Y4 121 aa6.25□□□□□ -1.41
NEIL1-202ENST00000561643 UQCR11O14957 56 aa6.24□□□□□ -1.41
NEIL1-202ENST00000561643 ROMO1P60602 79 aa6.24□□□□□ -1.41
NEIL1-202ENST00000561643 HYDINQ4G0P3 5121 aa6.23□□□□□ -1.41
NEIL1-202ENST00000561643 DMAC1Q96GE9 116 aa6.23□□□□□ -1.41
NEIL1-202ENST00000561643 PKD1P98161 4303 aa6.22□□□□□ -1.41
NEIL1-202ENST00000561643 FAT2Q9NYQ8 4349 aa6.22□□□□□ -1.41
NEIL1-202ENST00000561643 IGKV2-30P06310 120 aa6.21□□□□□ -1.41
NEIL1-202ENST00000561643 KRTAP16-1A8MUX0 517 aa6.21□□□□□ -1.42
NEIL1-202ENST00000561643 TYMSOSQ8TAI1 123 aa6.21□□□□□ -1.42
NEIL1-202ENST00000561643 VPS13BQ7Z7G8 4022 aa6.18□□□□□ -1.42
NEIL1-202ENST00000561643 IGKV2D-30A0A075B6S6 120 aa6.18□□□□□ -1.42
NEIL1-202ENST00000561643 A0A0A0MQY5 61 aa6.18□□□□□ -1.42
NEIL1-202ENST00000561643 SPINK1P00995 79 aa6.17□□□□□ -1.42
NEIL1-202ENST00000561643 DMBT1Q9UGM3 2413 aaPredicted RBP6.16□□□□□ -1.42
NEIL1-202ENST00000561643 P0C880 135 aa6.16□□□□□ -1.42
NEIL1-202ENST00000561643 SMR3BP02814 79 aaPredicted RBP6.12□□□□□ -1.43
NEIL1-202ENST00000561643 LINC00304Q8N9R0 145 aa6.12□□□□□ -1.43
NEIL1-202ENST00000561643 KRTAP25-1Q3LHN0 102 aa6.1□□□□□ -1.43
NEIL1-202ENST00000561643 KMT2CQ8NEZ4 4911 aaKnown RBP6.08□□□□□ -1.44
NEIL1-202ENST00000561643 A8MUU9 505 aa6.08□□□□□ -1.44
NEIL1-202ENST00000561643 PKHD1P08F94 4074 aa6.07□□□□□ -1.44
NEIL1-202ENST00000561643 RPS29P62273 56 aaKnown RBP6.05□□□□□ -1.44
NEIL1-202ENST00000561643 SACSQ9NZJ4 4579 aa6.05□□□□□ -1.44
NEIL1-202ENST00000561643 NDUFAF8A1L188 74 aa6.04□□□□□ -1.44
NEIL1-202ENST00000561643 DYNC1H1Q14204 4646 aaKnown RBP6.03□□□□□ -1.44
NEIL1-202ENST00000561643 Q8N1X5 172 aa6.02□□□□□ -1.45
NEIL1-202ENST00000561643 C9orf92A6NGG3 77 aa6.01□□□□□ -1.45
NEIL1-202ENST00000561643 SPINT4Q6UDR6 99 aa6□□□□□ -1.45
NEIL1-202ENST00000561643 FAT1Q14517 4588 aa5.99□□□□□ -1.45
NEIL1-202ENST00000561643 H0YAA0 97 aa5.98□□□□□ -1.45
NEIL1-202ENST00000561643 A0A1B0GVY2 172 aa5.95□□□□□ -1.46
NEIL1-202ENST00000561643 RYR2Q92736 4967 aa5.94□□□□□ -1.46
NEIL1-202ENST00000561643 C20orf166-AS1Q96NR2 134 aa5.94□□□□□ -1.46
NEIL1-202ENST00000561643 APOBP04114 4563 aaKnown RBP5.94□□□□□ -1.46
NEIL1-202ENST00000561643 KRTAP10-4P60372 401 aaPredicted RBP5.93□□□□□ -1.46
NEIL1-202ENST00000561643 RYR3Q15413 4870 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms