RNA–Protein interactions for RNA: ENST00000560867.1

HMG20A-211, Transcript of high mobility group 20A, humanhuman

TSL 4

Gene HMG20A, Length 559 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-211ENST00000560867 LRRIQ1Q96JM4 1722 aa0.56□□□□□ -2.32
HMG20A-211ENST00000560867 CRYBG1Q9Y4K1 1723 aa0.56□□□□□ -2.32
HMG20A-211ENST00000560867 K7EQZ3 153 aa0.56□□□□□ -2.32
HMG20A-211ENST00000560867 PDCD5O14737 125 aa0.56□□□□□ -2.32
HMG20A-211ENST00000560867 DEFA5Q01523 94 aa0.56□□□□□ -2.32
HMG20A-211ENST00000560867 GAFA1Q96PS6 74 aa0.56□□□□□ -2.32
HMG20A-211ENST00000560867 IFI6P09912 130 aa0.55□□□□□ -2.32
HMG20A-211ENST00000560867 LRP1BQ9NZR2 4599 aa0.55□□□□□ -2.32
HMG20A-211ENST00000560867 FRAS1Q86XX4 4008 aa0.55□□□□□ -2.32
HMG20A-211ENST00000560867 MYCBP2O75592 4640 aa0.55□□□□□ -2.32
HMG20A-211ENST00000560867 AKAP9Q99996 3911 aa0.55□□□□□ -2.32
HMG20A-211ENST00000560867 A0A087WXM4 84 aa0.54□□□□□ -2.32
HMG20A-211ENST00000560867 FXYD6-FXYD2A0A087WZ82 144 aa0.54□□□□□ -2.32
HMG20A-211ENST00000560867 HMGA1P17096 107 aaKnown RBP0.54□□□□□ -2.32
HMG20A-211ENST00000560867 COX7BP24311 80 aa0.54□□□□□ -2.32
HMG20A-211ENST00000560867 IFI27P40305 119 aaPredicted RBP0.54□□□□□ -2.32
HMG20A-211ENST00000560867 ATP5EP2Q5VTU8 51 aa0.54□□□□□ -2.32
HMG20A-211ENST00000560867 ANK2Q01484 3957 aa0.54□□□□□ -2.32
HMG20A-211ENST00000560867 ERICH3Q5RHP9 1530 aa0.54□□□□□ -2.32
HMG20A-211ENST00000560867 CSMD3Q7Z407 3707 aa0.53□□□□□ -2.32
HMG20A-211ENST00000560867 PTPN23Q9H3S7 1636 aa0.53□□□□□ -2.32
HMG20A-211ENST00000560867 GOLGA4Q13439 2230 aaKnown RBP0.53□□□□□ -2.32
HMG20A-211ENST00000560867 ALS2Q96Q42 1657 aa0.53□□□□□ -2.32
HMG20A-211ENST00000560867 DOT1LQ8TEK3 1739 aa0.53□□□□□ -2.32
HMG20A-211ENST00000560867 RGPD8O14715 1765 aaPredicted RBP0.53□□□□□ -2.32
HMG20A-211ENST00000560867 RGPD5Q99666 1765 aa0.53□□□□□ -2.32
HMG20A-211ENST00000560867 UMAD1C9J7I0 102 aa0.53□□□□□ -2.32
HMG20A-211ENST00000560867 NDUFB1O75438 58 aa0.53□□□□□ -2.32
HMG20A-211ENST00000560867 HEPN1Q6WQI6 88 aa0.53□□□□□ -2.32
HMG20A-211ENST00000560867 WFDC9Q8NEX5 89 aa0.53□□□□□ -2.32
HMG20A-211ENST00000560867 PKHD1P08F94 4074 aa0.53□□□□□ -2.32
HMG20A-211ENST00000560867 CD163L1Q9NR16 1453 aa0.53□□□□□ -2.33
HMG20A-211ENST00000560867 HECTD4Q9Y4D8 3996 aa0.52□□□□□ -2.33
HMG20A-211ENST00000560867 SPTY2D1-AS1A0A0U1RR47 76 aa0.52□□□□□ -2.33
HMG20A-211ENST00000560867 LCE6AA0A183 80 aa0.52□□□□□ -2.33
HMG20A-211ENST00000560867 PHGR1C9JFL3 82 aa0.52□□□□□ -2.33
HMG20A-211ENST00000560867 COX6B1P14854 86 aa0.52□□□□□ -2.33
HMG20A-211ENST00000560867 SPRR1AP35321 89 aa0.52□□□□□ -2.33
HMG20A-211ENST00000560867 Q5VSD8 79 aa0.52□□□□□ -2.33
HMG20A-211ENST00000560867 SMIM5Q71RC9 77 aa0.52□□□□□ -2.33
HMG20A-211ENST00000560867 USMG5Q96IX5 58 aa0.52□□□□□ -2.33
HMG20A-211ENST00000560867 ABCA9Q8IUA7 1624 aa0.52□□□□□ -2.33
HMG20A-211ENST00000560867 PARP4Q9UKK3 1724 aaKnown RBP0.52□□□□□ -2.33
HMG20A-211ENST00000560867 TOGARAM1Q9Y4F4 1720 aa0.52□□□□□ -2.33
HMG20A-211ENST00000560867 CMYA5Q8N3K9 4069 aa0.52□□□□□ -2.33
HMG20A-211ENST00000560867 TOP2AP11388 1531 aaKnown RBP0.51□□□□□ -2.33
HMG20A-211ENST00000560867 LMO7Q8WWI1 1683 aa0.51□□□□□ -2.33
HMG20A-211ENST00000560867 INO80Q9ULG1 1556 aaPredicted RBP0.51□□□□□ -2.33
HMG20A-211ENST00000560867 TRRAPQ9Y4A5 3859 aa0.51□□□□□ -2.33
HMG20A-211ENST00000560867 LRP1Q07954 4544 aaKnown RBP0.5□□□□□ -2.33
HMG20A-211ENST00000560867 CCDC141Q6ZP82 1450 aa0.5□□□□□ -2.33
HMG20A-211ENST00000560867 CPSF4LA6NMK7 179 aaKnown RBP0.5□□□□□ -2.33
HMG20A-211ENST00000560867 I3L3M4 83 aa0.5□□□□□ -2.33
HMG20A-211ENST00000560867 PRH1P02810 166 aa0.5□□□□□ -2.33
HMG20A-211ENST00000560867 SPRR1BP22528 89 aa0.5□□□□□ -2.33
HMG20A-211ENST00000560867 NREPQ16612 68 aa0.5□□□□□ -2.33
HMG20A-211ENST00000560867 SMR3AQ99954 134 aa0.5□□□□□ -2.33
HMG20A-211ENST00000560867 RGPD2P0DJD1 1756 aa0.5□□□□□ -2.33
HMG20A-211ENST00000560867 HSPG2P98160 4391 aa0.5□□□□□ -2.33
HMG20A-211ENST00000560867 DDX60LQ5H9U9 1706 aaKnown RBP0.5□□□□□ -2.33
HMG20A-211ENST00000560867 PIK3C2BO00750 1634 aa0.49□□□□□ -2.33
HMG20A-211ENST00000560867 LRP2P98164 4655 aa0.49□□□□□ -2.33
HMG20A-211ENST00000560867 SMIM31A0A1B0GVY4 71 aa0.49□□□□□ -2.33
HMG20A-211ENST00000560867 COX8AP10176 69 aa0.49□□□□□ -2.33
HMG20A-211ENST00000560867 SPINK6Q6UWN8 80 aa0.49□□□□□ -2.33
HMG20A-211ENST00000560867 MRPL34Q9BQ48 92 aaKnown RBP0.49□□□□□ -2.33
HMG20A-211ENST00000560867 DDX60Q8IY21 1712 aaKnown RBP0.49□□□□□ -2.33
HMG20A-211ENST00000560867 IQGAP3Q86VI3 1631 aa0.49□□□□□ -2.33
HMG20A-211ENST00000560867 ABCC6O95255 1503 aa0.48□□□□□ -2.33
HMG20A-211ENST00000560867 FAT1Q14517 4588 aa0.48□□□□□ -2.33
HMG20A-211ENST00000560867 C4AP0C0L4 1744 aa0.48□□□□□ -2.33
HMG20A-211ENST00000560867 H3BVH4 76 aa0.48□□□□□ -2.33
HMG20A-211ENST00000560867 HILPDAQ9Y5L2 63 aa0.48□□□□□ -2.33
HMG20A-211ENST00000560867 DYNC1H1Q14204 4646 aaKnown RBP0.47□□□□□ -2.33
HMG20A-211ENST00000560867 MYO5CQ9NQX4 1742 aa0.47□□□□□ -2.33
HMG20A-211ENST00000560867 APLNQ9ULZ1 77 aa0.47□□□□□ -2.33
HMG20A-211ENST00000560867 ANKRD50Q9ULJ7 1429 aa0.47□□□□□ -2.33
HMG20A-211ENST00000560867 DNAH9Q9NYC9 4486 aa0.46□□□□□ -2.34
HMG20A-211ENST00000560867 KIF1AQ12756 1690 aa0.46□□□□□ -2.34
HMG20A-211ENST00000560867 ANKRD36A6QL64 1941 aa0.46□□□□□ -2.34
HMG20A-211ENST00000560867 EIF2AK4Q9P2K8 1649 aaKnown RBP0.46□□□□□ -2.34
HMG20A-211ENST00000560867 PLXNC1O60486 1568 aa0.46□□□□□ -2.34
HMG20A-211ENST00000560867 RPL38P63173 70 aaKnown RBP0.46□□□□□ -2.34
HMG20A-211ENST00000560867 FAT2Q9NYQ8 4349 aa0.46□□□□□ -2.34
HMG20A-211ENST00000560867 TRPM2O94759 1503 aa0.46□□□□□ -2.34
HMG20A-211ENST00000560867 CDC42BPAQ5VT25 1732 aa0.46□□□□□ -2.34
HMG20A-211ENST00000560867 DNAH7Q8WXX0 4024 aa0.46□□□□□ -2.34
HMG20A-211ENST00000560867 USF3Q68DE3 2245 aa0.45□□□□□ -2.34
HMG20A-211ENST00000560867 ABCA10Q8WWZ4 1543 aa0.45□□□□□ -2.34
HMG20A-211ENST00000560867 NDUFA4O00483 81 aa0.45□□□□□ -2.34
HMG20A-211ENST00000560867 KRTAP19-6Q3LI70 58 aa0.45□□□□□ -2.34
HMG20A-211ENST00000560867 DEFB105AQ8NG35 78 aa0.45□□□□□ -2.34
HMG20A-211ENST00000560867 SYCP2Q9BX26 1530 aa0.44□□□□□ -2.34
HMG20A-211ENST00000560867 ANK3Q12955 4377 aaKnown RBP0.44□□□□□ -2.34
HMG20A-211ENST00000560867 CCL22O00626 93 aa0.44□□□□□ -2.34
HMG20A-211ENST00000560867 KLK9Q2XQG4 91 aa0.44□□□□□ -2.34
HMG20A-211ENST00000560867 H1FX-AS1Q4G0G2 97 aa0.44□□□□□ -2.34
HMG20A-211ENST00000560867 PKD1P98161 4303 aa0.44□□□□□ -2.34
HMG20A-211ENST00000560867 IQGAP2Q13576 1575 aa0.44□□□□□ -2.34
HMG20A-211ENST00000560867 CDC42BPGQ6DT37 1551 aa0.44□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms