RNA–Protein interactions for RNA: ENST00000560208.1

CRNDE-209, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 2

Gene CRNDE, Length 735 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-209ENST00000560208 LINC00472Q9H8W2 130 aa12.38□□□□□ -0.43
CRNDE-209ENST00000560208 K7EP34 96 aa12.37□□□□□ -0.43
CRNDE-209ENST00000560208 KRTAP9-6A0A140TA67 174 aa12.35□□□□□ -0.43
CRNDE-209ENST00000560208 C21orf62-AS1Q17RA5 79 aa12.35□□□□□ -0.43
CRNDE-209ENST00000560208 DSCR10P59022 87 aa12.34□□□□□ -0.43
CRNDE-209ENST00000560208 MT1HP80294 61 aa12.34□□□□□ -0.43
CRNDE-209ENST00000560208 SMCPP49901 116 aaPredicted RBP12.32□□□□□ -0.44
CRNDE-209ENST00000560208 A0A1B0GW54 56 aa12.28□□□□□ -0.44
CRNDE-209ENST00000560208 GTF2H5Q6ZYL4 71 aa12.28□□□□□ -0.44
CRNDE-209ENST00000560208 PRO0461Q9UI25 63 aa12.28□□□□□ -0.44
CRNDE-209ENST00000560208 IGHV6-1A0A0B4J1U7 121 aa12.26□□□□□ -0.45
CRNDE-209ENST00000560208 LINC00313P59037 77 aa12.26□□□□□ -0.45
CRNDE-209ENST00000560208 J3KT08 172 aa12.23□□□□□ -0.45
CRNDE-209ENST00000560208 Q75L30 129 aa12.23□□□□□ -0.45
CRNDE-209ENST00000560208 NREPQ16612 68 aa12.22□□□□□ -0.45
CRNDE-209ENST00000560208 NOTCH2NLQ7Z3S9 236 aa12.21□□□□□ -0.45
CRNDE-209ENST00000560208 A0A1B0GVX0 72 aa12.2□□□□□ -0.46
CRNDE-209ENST00000560208 COX6B2Q6YFQ2 88 aa12.2□□□□□ -0.46
CRNDE-209ENST00000560208 ATP11AUNQ6ZP68 121 aa12.19□□□□□ -0.46
CRNDE-209ENST00000560208 C20orf166-AS1Q96NR2 134 aa12.17□□□□□ -0.46
CRNDE-209ENST00000560208 A8MUU9 505 aa12.16□□□□□ -0.46
CRNDE-209ENST00000560208 NDUFB1O75438 58 aa12.15□□□□□ -0.46
CRNDE-209ENST00000560208 KRTAP16-1A8MUX0 517 aa12.14□□□□□ -0.47
CRNDE-209ENST00000560208 C8orf87E5RJ46 101 aa12.14□□□□□ -0.47
CRNDE-209ENST00000560208 FLGP20930 4061 aaPredicted RBP12.14□□□□□ -0.47
CRNDE-209ENST00000560208 M0R2T5 61 aa12.13□□□□□ -0.47
CRNDE-209ENST00000560208 KRTAP10-6P60371 365 aaPredicted RBP12.13□□□□□ -0.47
CRNDE-209ENST00000560208 F8W1H4 67 aa12.12□□□□□ -0.47
CRNDE-209ENST00000560208 LORP23490 312 aaPredicted RBP12.12□□□□□ -0.47
CRNDE-209ENST00000560208 A8MWP4 228 aa12.11□□□□□ -0.47
CRNDE-209ENST00000560208 IGKV3D-7A0A0C4DH55 119 aa12.08□□□□□ -0.48
CRNDE-209ENST00000560208 ETDBQ3ZM63 59 aa12.06□□□□□ -0.48
CRNDE-209ENST00000560208 Q6ZVQ6 151 aa12.05□□□□□ -0.48
CRNDE-209ENST00000560208 C8orf17Q9NRJ1 99 aa12.04□□□□□ -0.48
CRNDE-209ENST00000560208 CRCT1Q9UGL9 99 aa12.04□□□□□ -0.48
CRNDE-209ENST00000560208 BPY2O14599 106 aa12.03□□□□□ -0.48
CRNDE-209ENST00000560208 PRR15Q8IV56 129 aa12.02□□□□□ -0.49
CRNDE-209ENST00000560208 FSIP2Q5CZC0 6907 aa12□□□□□ -0.49
CRNDE-209ENST00000560208 LINC00846Q9NV44 126 aa12□□□□□ -0.49
CRNDE-209ENST00000560208 K7EQZ3 153 aa11.99□□□□□ -0.49
CRNDE-209ENST00000560208 UBL5Q9BZL1 73 aa11.96□□□□□ -0.49
CRNDE-209ENST00000560208 A0A1B0GV90 55 aa11.94□□□□□ -0.5
CRNDE-209ENST00000560208 MMP24-AS1A0A0U1RRL7 71 aa11.92□□□□□ -0.5
CRNDE-209ENST00000560208 Q8N9L7 120 aa11.92□□□□□ -0.5
CRNDE-209ENST00000560208 Q8N9P0 234 aaPredicted RBP11.89□□□□□ -0.51
CRNDE-209ENST00000560208 TMEM254Q8TBM7 123 aa11.86□□□□□ -0.51
CRNDE-209ENST00000560208 MRPL34Q9BQ48 92 aaKnown RBP11.86□□□□□ -0.51
CRNDE-209ENST00000560208 hDV103S1A0JD37 113 aa11.85□□□□□ -0.51
CRNDE-209ENST00000560208 ZCCHC13Q8WW36 166 aaKnown RBP11.85□□□□□ -0.51
CRNDE-209ENST00000560208 WFDC13Q8IUB5 93 aa11.82□□□□□ -0.52
CRNDE-209ENST00000560208 NDUFS5O43920 106 aa11.81□□□□□ -0.52
CRNDE-209ENST00000560208 CASC2Q6XLA1 102 aa11.77□□□□□ -0.53
CRNDE-209ENST00000560208 ACYP1P07311 99 aa11.72□□□□□ -0.53
CRNDE-209ENST00000560208 HCG22E2RYF7 251 aa11.69□□□□□ -0.54
CRNDE-209ENST00000560208 CXCL6P80162 114 aa11.69□□□□□ -0.54
CRNDE-209ENST00000560208 FAM236DA0A1B0GTK5 79 aa11.68□□□□□ -0.54
CRNDE-209ENST00000560208 FAM236CP0DP71 79 aa11.68□□□□□ -0.54
CRNDE-209ENST00000560208 SPINK7P58062 85 aa11.68□□□□□ -0.54
CRNDE-209ENST00000560208 FAM240AA0A1B0GVK7 77 aa11.67□□□□□ -0.54
CRNDE-209ENST00000560208 HRES1P13985 223 aa11.67□□□□□ -0.54
CRNDE-209ENST00000560208 KRTAP9-8Q9BYQ0 159 aa11.67□□□□□ -0.54
CRNDE-209ENST00000560208 RBM12B-AS1Q9P1G2 102 aa11.64□□□□□ -0.55
CRNDE-209ENST00000560208 MPLKIPQ8TAP9 179 aa11.63□□□□□ -0.55
CRNDE-209ENST00000560208 Q5W150 140 aa11.58□□□□□ -0.56
CRNDE-209ENST00000560208 ATP5EP2Q5VTU8 51 aa11.54□□□□□ -0.56
CRNDE-209ENST00000560208 IGKV2D-30A0A075B6S6 120 aa11.53□□□□□ -0.56
CRNDE-209ENST00000560208 IGKV2-30P06310 120 aa11.53□□□□□ -0.56
CRNDE-209ENST00000560208 HIST1H4AP62805 103 aaKnown RBP11.51□□□□□ -0.57
CRNDE-209ENST00000560208 MT2AP02795 61 aa11.49□□□□□ -0.57
CRNDE-209ENST00000560208 LINC00643Q86TS7 51 aa11.47□□□□□ -0.57
CRNDE-209ENST00000560208 J3QR89 54 aa11.46□□□□□ -0.57
CRNDE-209ENST00000560208 C7orf65Q6ZTY9 151 aa11.45□□□□□ -0.58
CRNDE-209ENST00000560208 TP53AIP1Q9HCN2 124 aa11.42□□□□□ -0.58
CRNDE-209ENST00000560208 USH2AO75445 5202 aa11.41□□□□□ -0.58
CRNDE-209ENST00000560208 MT1FP04733 61 aa11.39□□□□□ -0.59
CRNDE-209ENST00000560208 A0A087WVE0 104 aa11.38□□□□□ -0.59
CRNDE-209ENST00000560208 KRTAP10-10P60014 251 aa11.36□□□□□ -0.59
CRNDE-209ENST00000560208 SSPOA2VEC9 5147 aa11.33□□□□□ -0.6
CRNDE-209ENST00000560208 KRTAP9-3Q9BYQ3 159 aa11.31□□□□□ -0.6
CRNDE-209ENST00000560208 C4orf26Q17RF5 130 aa11.26□□□□□ -0.61
CRNDE-209ENST00000560208 TRAV22A0A0B4J277 110 aa11.23□□□□□ -0.61
CRNDE-209ENST00000560208 H1FX-AS1Q4G0G2 97 aa11.21□□□□□ -0.61
CRNDE-209ENST00000560208 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.2□□□□□ -0.62
CRNDE-209ENST00000560208 UQCRQO14949 82 aa11.2□□□□□ -0.62
CRNDE-209ENST00000560208 K7ERU9 68 aa11.19□□□□□ -0.62
CRNDE-209ENST00000560208 LOC100996750A0A140TA64 210 aa11.17□□□□□ -0.62
CRNDE-209ENST00000560208 KRTAP4-6Q9BYQ5 205 aa11.17□□□□□ -0.62
CRNDE-209ENST00000560208 H0Y9P7 68 aa11.16□□□□□ -0.62
CRNDE-209ENST00000560208 KRTAP19-1Q8IUB9 90 aa11.14□□□□□ -0.63
CRNDE-209ENST00000560208 CYP4F30PQ9H0H9 118 aa11.14□□□□□ -0.63
CRNDE-209ENST00000560208 LOC101927531A0A1B0GV80 90 aa11.13□□□□□ -0.63
CRNDE-209ENST00000560208 FCGBPQ9Y6R7 5405 aaPredicted RBP11.11□□□□□ -0.63
CRNDE-209ENST00000560208 KRTAP9-7A8MTY7 169 aa11.1□□□□□ -0.63
CRNDE-209ENST00000560208 ATOX1O00244 68 aa11.09□□□□□ -0.63
CRNDE-209ENST00000560208 C1orf64Q8NEQ6 169 aa11.09□□□□□ -0.63
CRNDE-209ENST00000560208 MT-ATP8P03928 68 aa11.07□□□□□ -0.64
CRNDE-209ENST00000560208 OCR1Q9BZK8 76 aa11.06□□□□□ -0.64
CRNDE-209ENST00000560208 SCGB1A1P11684 91 aa11.05□□□□□ -0.64
CRNDE-209ENST00000560208 KRTAP3-1Q9BYR8 98 aa11.05□□□□□ -0.64
CRNDE-209ENST00000560208 LINC00208Q96KT6 92 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 167.5 ms