RNA–Protein interactions for RNA: ENST00000559934.5

PSMA4-215, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 2,741 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-215ENST00000559934 SPACA4Q8TDM5 124 aa13.01□□□□□ -0.33
PSMA4-215ENST00000559934 PRR26Q8N8Z3 221 aa12.99□□□□□ -0.33
PSMA4-215ENST00000559934 Q5W150 140 aa12.98□□□□□ -0.33
PSMA4-215ENST00000559934 Q6ZRN7 208 aaPredicted RBP12.98□□□□□ -0.33
PSMA4-215ENST00000559934 FRAS1Q86XX4 4008 aa12.97□□□□□ -0.33
PSMA4-215ENST00000559934 PLECQ15149 4684 aaKnown RBP12.97□□□□□ -0.33
PSMA4-215ENST00000559934 NBDYA0A0U1RRE5 68 aa12.97□□□□□ -0.33
PSMA4-215ENST00000559934 SPINK6Q6UWN8 80 aa12.96□□□□□ -0.34
PSMA4-215ENST00000559934 DNAH8Q96JB1 4490 aa12.94□□□□□ -0.34
PSMA4-215ENST00000559934 PSORS1C2Q9UIG4 136 aa12.94□□□□□ -0.34
PSMA4-215ENST00000559934 DYNC2H1Q8NCM8 4307 aaKnown RBP12.93□□□□□ -0.34
PSMA4-215ENST00000559934 ZNF706Q9Y5V0 76 aaPredicted RBP12.92□□□□□ -0.34
PSMA4-215ENST00000559934 MDFIQ99750 246 aa12.91□□□□□ -0.34
PSMA4-215ENST00000559934 C7orf65Q6ZTY9 151 aa12.9□□□□□ -0.35
PSMA4-215ENST00000559934 KRTAP13-3Q3SY46 172 aa12.89□□□□□ -0.35
PSMA4-215ENST00000559934 IGLV5-52A0A0A0MRZ9 124 aa12.87□□□□□ -0.35
PSMA4-215ENST00000559934 HECTD4Q9Y4D8 3996 aa12.84□□□□□ -0.35
PSMA4-215ENST00000559934 ALMS1Q8TCU4 4167 aa12.83□□□□□ -0.36
PSMA4-215ENST00000559934 ZNF861PO60384 105 aa12.82□□□□□ -0.36
PSMA4-215ENST00000559934 A0A087WTM6 91 aa12.78□□□□□ -0.36
PSMA4-215ENST00000559934 CIRBP-AS1Q8TBR5 109 aa12.78□□□□□ -0.36
PSMA4-215ENST00000559934 ACYP2P14621 99 aa12.78□□□□□ -0.36
PSMA4-215ENST00000559934 RTL8CO15255 209 aa12.76□□□□□ -0.37
PSMA4-215ENST00000559934 RETNLBQ9BQ08 111 aa12.75□□□□□ -0.37
PSMA4-215ENST00000559934 DNAH17Q9UFH2 4485 aa12.7□□□□□ -0.38
PSMA4-215ENST00000559934 DMAC1Q96GE9 116 aa12.7□□□□□ -0.38
PSMA4-215ENST00000559934 STARD9Q9P2P6 4700 aa12.7□□□□□ -0.38
PSMA4-215ENST00000559934 VPS13DQ5THJ4 4388 aa12.69□□□□□ -0.38
PSMA4-215ENST00000559934 LINC00313P59037 77 aa12.68□□□□□ -0.38
PSMA4-215ENST00000559934 PRAC1Q96KF2 57 aa12.67□□□□□ -0.38
PSMA4-215ENST00000559934 NUPR2A6NF83 97 aa12.65□□□□□ -0.38
PSMA4-215ENST00000559934 FBN3Q75N90 2809 aa12.64□□□□□ -0.39
PSMA4-215ENST00000559934 IGLV7-43P04211 117 aa12.63□□□□□ -0.39
PSMA4-215ENST00000559934 C8orf87E5RJ46 101 aa12.62□□□□□ -0.39
PSMA4-215ENST00000559934 ADM2Q7Z4H4 148 aa12.62□□□□□ -0.39
PSMA4-215ENST00000559934 DNAH2Q9P225 4427 aa12.62□□□□□ -0.39
PSMA4-215ENST00000559934 A0A1B0GU69 56 aa12.62□□□□□ -0.39
PSMA4-215ENST00000559934 KMT2AQ03164 3969 aa12.62□□□□□ -0.39
PSMA4-215ENST00000559934 FAM229AH3BQW9 127 aa12.57□□□□□ -0.4
PSMA4-215ENST00000559934 MEGF8Q7Z7M0 2845 aa12.56□□□□□ -0.4
PSMA4-215ENST00000559934 IGKV2-30P06310 120 aa12.56□□□□□ -0.4
PSMA4-215ENST00000559934 TGP01266 2768 aa12.54□□□□□ -0.4
PSMA4-215ENST00000559934 SSBP3-AS1Q7Z2R9 100 aa12.52□□□□□ -0.41
PSMA4-215ENST00000559934 SPATA8Q6RVD6 105 aa12.51□□□□□ -0.41
PSMA4-215ENST00000559934 PRKDCP78527 4128 aaKnown RBP12.5□□□□□ -0.41
PSMA4-215ENST00000559934 PLA2G1BP04054 148 aaKnown RBP12.46□□□□□ -0.41
PSMA4-215ENST00000559934 MIR22HGQ0VDD5 57 aa12.46□□□□□ -0.42
PSMA4-215ENST00000559934 IGKV2D-30A0A075B6S6 120 aa12.45□□□□□ -0.42
PSMA4-215ENST00000559934 DNAH6Q9C0G6 4158 aa12.44□□□□□ -0.42
PSMA4-215ENST00000559934 KRTAP16-1A8MUX0 517 aa12.44□□□□□ -0.42
PSMA4-215ENST00000559934 KRTAP13-2Q52LG2 175 aa12.43□□□□□ -0.42
PSMA4-215ENST00000559934 DNAH11Q96DT5 4516 aa12.42□□□□□ -0.42
PSMA4-215ENST00000559934 UQCR11O14957 56 aa12.41□□□□□ -0.42
PSMA4-215ENST00000559934 C1orf134Q5TEV5 83 aa12.34□□□□□ -0.43
PSMA4-215ENST00000559934 DNAH5Q8TE73 4624 aa12.31□□□□□ -0.44
PSMA4-215ENST00000559934 LINC01554Q52M75 96 aa12.28□□□□□ -0.44
PSMA4-215ENST00000559934 KRTAP10-2P60368 255 aa12.27□□□□□ -0.44
PSMA4-215ENST00000559934 SPINK1P00995 79 aa12.27□□□□□ -0.45
PSMA4-215ENST00000559934 LRP1BQ9NZR2 4599 aa12.23□□□□□ -0.45
PSMA4-215ENST00000559934 Q8N1X5 172 aa12.21□□□□□ -0.45
PSMA4-215ENST00000559934 CSAG1Q6PB30 78 aa12.19□□□□□ -0.46
PSMA4-215ENST00000559934 LY6G6CO95867 125 aa12.17□□□□□ -0.46
PSMA4-215ENST00000559934 KRTAP1-4P0C5Y4 121 aa12.17□□□□□ -0.46
PSMA4-215ENST00000559934 KRTAP10-1P60331 282 aa12.1□□□□□ -0.47
PSMA4-215ENST00000559934 VPS13BQ7Z7G8 4022 aa12.07□□□□□ -0.48
PSMA4-215ENST00000559934 C4orf48Q5BLP8 95 aa12.06□□□□□ -0.48
PSMA4-215ENST00000559934 PKD1P98161 4303 aa12.03□□□□□ -0.48
PSMA4-215ENST00000559934 Q6ZSA8 131 aa12.03□□□□□ -0.48
PSMA4-215ENST00000559934 TYMSOSQ8TAI1 123 aa12.02□□□□□ -0.49
PSMA4-215ENST00000559934 H0YAA0 97 aa12□□□□□ -0.49
PSMA4-215ENST00000559934 A8MUU9 505 aa11.9□□□□□ -0.5
PSMA4-215ENST00000559934 FAT2Q9NYQ8 4349 aa11.9□□□□□ -0.5
PSMA4-215ENST00000559934 HYDINQ4G0P3 5121 aa11.88□□□□□ -0.51
PSMA4-215ENST00000559934 KRTAP3-1Q9BYR8 98 aa11.85□□□□□ -0.51
PSMA4-215ENST00000559934 LINC00304Q8N9R0 145 aa11.84□□□□□ -0.51
PSMA4-215ENST00000559934 C9orf92A6NGG3 77 aa11.84□□□□□ -0.51
PSMA4-215ENST00000559934 A0A1B0GU33 70 aa11.82□□□□□ -0.52
PSMA4-215ENST00000559934 H3BS24 57 aa11.77□□□□□ -0.52
PSMA4-215ENST00000559934 H1FX-AS1Q4G0G2 97 aa11.76□□□□□ -0.53
PSMA4-215ENST00000559934 KRTAP25-1Q3LHN0 102 aa11.75□□□□□ -0.53
PSMA4-215ENST00000559934 FLG2Q5D862 2391 aaPredicted RBP11.73□□□□□ -0.53
PSMA4-215ENST00000559934 C20orf166-AS1Q96NR2 134 aa11.7□□□□□ -0.54
PSMA4-215ENST00000559934 DNHD1Q96M86 4753 aa11.68□□□□□ -0.54
PSMA4-215ENST00000559934 RPS29P62273 56 aaKnown RBP11.68□□□□□ -0.54
PSMA4-215ENST00000559934 PKHD1P08F94 4074 aa11.66□□□□□ -0.54
PSMA4-215ENST00000559934 CRIPTQ9P021 101 aa11.65□□□□□ -0.54
PSMA4-215ENST00000559934 SACSQ9NZJ4 4579 aa11.65□□□□□ -0.54
PSMA4-215ENST00000559934 SMR3BP02814 79 aaPredicted RBP11.59□□□□□ -0.55
PSMA4-215ENST00000559934 COX6B2Q6YFQ2 88 aa11.58□□□□□ -0.56
PSMA4-215ENST00000559934 ROMO1P60602 79 aa11.53□□□□□ -0.56
PSMA4-215ENST00000559934 PKHD1L1Q86WI1 4243 aa11.5□□□□□ -0.57
PSMA4-215ENST00000559934 K7ERS5 55 aa11.48□□□□□ -0.57
PSMA4-215ENST00000559934 FAT1Q14517 4588 aa11.47□□□□□ -0.57
PSMA4-215ENST00000559934 DYNC1H1Q14204 4646 aaKnown RBP11.43□□□□□ -0.58
PSMA4-215ENST00000559934 APOBP04114 4563 aaKnown RBP11.4□□□□□ -0.59
PSMA4-215ENST00000559934 KRTAP13-4Q3LI77 160 aa11.35□□□□□ -0.59
PSMA4-215ENST00000559934 KRTAP10-6P60371 365 aaPredicted RBP11.34□□□□□ -0.59
PSMA4-215ENST00000559934 KRTAP10-4P60372 401 aaPredicted RBP11.32□□□□□ -0.6
PSMA4-215ENST00000559934 A0A0D9SG42 100 aa11.32□□□□□ -0.6
PSMA4-215ENST00000559934 DMBT1Q9UGM3 2413 aaPredicted RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms