RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 CCKP06307 115 aa2.99□□□□□ -1.93
SPG11-220ENST00000559933 LINC00304Q8N9R0 145 aa2.99□□□□□ -1.93
SPG11-220ENST00000559933 RETNLBQ9BQ08 111 aa2.99□□□□□ -1.93
SPG11-220ENST00000559933 A0A087WSZ3 146 aa2.98□□□□□ -1.93
SPG11-220ENST00000559933 LOC110117498A0A087WWA1 95 aa2.98□□□□□ -1.93
SPG11-220ENST00000559933 JMJD7-PLA2G4BH0Y9G9 81 aa2.98□□□□□ -1.93
SPG11-220ENST00000559933 H3BQ85 93 aa2.98□□□□□ -1.93
SPG11-220ENST00000559933 DSCR8Q96T75 97 aa2.98□□□□□ -1.93
SPG11-220ENST00000559933 TRBV7-7A0A0K0K1E9 115 aa2.97□□□□□ -1.93
SPG11-220ENST00000559933 OXTP01178 125 aa2.97□□□□□ -1.93
SPG11-220ENST00000559933 Q6JHZ5 121 aa2.97□□□□□ -1.93
SPG11-220ENST00000559933 SSBP3-AS1Q7Z2R9 100 aa2.97□□□□□ -1.93
SPG11-220ENST00000559933 HMCN2Q8NDA2 5059 aa2.97□□□□□ -1.93
SPG11-220ENST00000559933 DMBT1Q9UGM3 2413 aaPredicted RBP2.97□□□□□ -1.93
SPG11-220ENST00000559933 DEFB116Q30KQ4 102 aa2.96□□□□□ -1.94
SPG11-220ENST00000559933 RNF213Q63HN8 5207 aa2.95□□□□□ -1.94
SPG11-220ENST00000559933 LCE1EQ5T753 118 aa2.95□□□□□ -1.94
SPG11-220ENST00000559933 Q6Q795 121 aa2.95□□□□□ -1.94
SPG11-220ENST00000559933 LPAP08519 4548 aa2.95□□□□□ -1.94
SPG11-220ENST00000559933 KRTAP5-11Q6L8G4 156 aa2.94□□□□□ -1.94
SPG11-220ENST00000559933 Q96NJ1 140 aa2.94□□□□□ -1.94
SPG11-220ENST00000559933 LINC00846Q9NV44 126 aa2.94□□□□□ -1.94
SPG11-220ENST00000559933 FAT4Q6V0I7 4981 aa2.94□□□□□ -1.94
SPG11-220ENST00000559933 SPINK1P00995 79 aa2.93□□□□□ -1.94
SPG11-220ENST00000559933 CD164Q04900 197 aa2.93□□□□□ -1.94
SPG11-220ENST00000559933 C1orf195Q5TG92 126 aa2.93□□□□□ -1.94
SPG11-220ENST00000559933 PDE6GP18545 87 aa2.92□□□□□ -1.94
SPG11-220ENST00000559933 Q6ZVQ6 151 aa2.92□□□□□ -1.94
SPG11-220ENST00000559933 PRR4Q16378 134 aa2.91□□□□□ -1.94
SPG11-220ENST00000559933 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.91□□□□□ -1.94
SPG11-220ENST00000559933 SPAG11AQ6PDA7 123 aa2.91□□□□□ -1.94
SPG11-220ENST00000559933 Q8N9L7 120 aa2.91□□□□□ -1.94
SPG11-220ENST00000559933 SIGMAR1Q99720 223 aa2.91□□□□□ -1.94
SPG11-220ENST00000559933 LIMD2Q9BT23 127 aa2.91□□□□□ -1.94
SPG11-220ENST00000559933 BPY2O14599 106 aa2.9□□□□□ -1.95
SPG11-220ENST00000559933 IGKV4-1P06312 121 aa2.9□□□□□ -1.95
SPG11-220ENST00000559933 RPS29P62273 56 aaKnown RBP2.9□□□□□ -1.95
SPG11-220ENST00000559933 NREPQ16612 68 aa2.9□□□□□ -1.95
SPG11-220ENST00000559933 Q5XG85 94 aa2.9□□□□□ -1.95
SPG11-220ENST00000559933 LINC00472Q9H8W2 130 aa2.9□□□□□ -1.95
SPG11-220ENST00000559933 CRCT1Q9UGL9 99 aa2.9□□□□□ -1.95
SPG11-220ENST00000559933 LRP2P98164 4655 aa2.9□□□□□ -1.95
SPG11-220ENST00000559933 FSIP2Q5CZC0 6907 aa2.89□□□□□ -1.95
SPG11-220ENST00000559933 A0A0A0MQY5 61 aa2.89□□□□□ -1.95
SPG11-220ENST00000559933 IGKV3D-7A0A0C4DH55 119 aa2.89□□□□□ -1.95
SPG11-220ENST00000559933 C9orf92A6NGG3 77 aa2.89□□□□□ -1.95
SPG11-220ENST00000559933 K7EQZ3 153 aa2.89□□□□□ -1.95
SPG11-220ENST00000559933 NOTCH2NLQ7Z3S9 236 aa2.89□□□□□ -1.95
SPG11-220ENST00000559933 SS18L2Q9UHA2 77 aa2.89□□□□□ -1.95
SPG11-220ENST00000559933 FAM240AA0A1B0GVK7 77 aa2.88□□□□□ -1.95
SPG11-220ENST00000559933 DSCR10P59022 87 aa2.88□□□□□ -1.95
SPG11-220ENST00000559933 ASB16-AS1Q495Z4 193 aa2.88□□□□□ -1.95
SPG11-220ENST00000559933 UBL5Q9BZL1 73 aa2.88□□□□□ -1.95
SPG11-220ENST00000559933 IGLV7-46A0A075B6I9 117 aa2.87□□□□□ -1.95
SPG11-220ENST00000559933 IGHV6-1A0A0B4J1U7 121 aa2.87□□□□□ -1.95
SPG11-220ENST00000559933 J3QR89 54 aa2.86□□□□□ -1.95
SPG11-220ENST00000559933 K7ERU9 68 aa2.86□□□□□ -1.95
SPG11-220ENST00000559933 MT-ATP8P03928 68 aa2.86□□□□□ -1.95
SPG11-220ENST00000559933 ACYP1P07311 99 aa2.86□□□□□ -1.95
SPG11-220ENST00000559933 A0A087WVE0 104 aa2.85□□□□□ -1.95
SPG11-220ENST00000559933 A0A1B0GVX0 72 aa2.85□□□□□ -1.95
SPG11-220ENST00000559933 A0A1B0GW54 56 aa2.85□□□□□ -1.95
SPG11-220ENST00000559933 A8MWP4 228 aa2.85□□□□□ -1.95
SPG11-220ENST00000559933 KRTAP13-3Q3SY46 172 aa2.85□□□□□ -1.95
SPG11-220ENST00000559933 MMP24-AS1A0A0U1RRL7 71 aa2.84□□□□□ -1.95
SPG11-220ENST00000559933 FP248Q71RG6 208 aaPredicted RBP2.84□□□□□ -1.95
SPG11-220ENST00000559933 WFDC13Q8IUB5 93 aa2.84□□□□□ -1.95
SPG11-220ENST00000559933 SVIPQ8NHG7 77 aa2.84□□□□□ -1.95
SPG11-220ENST00000559933 KRTAP16-1A8MUX0 517 aa2.83□□□□□ -1.96
SPG11-220ENST00000559933 J3KT08 172 aa2.83□□□□□ -1.96
SPG11-220ENST00000559933 HIST1H4AP62805 103 aaKnown RBP2.83□□□□□ -1.96
SPG11-220ENST00000559933 LINC00643Q86TS7 51 aa2.83□□□□□ -1.96
SPG11-220ENST00000559933 PRR15Q8IV56 129 aa2.83□□□□□ -1.96
SPG11-220ENST00000559933 C8orf17Q9NRJ1 99 aa2.83□□□□□ -1.96
SPG11-220ENST00000559933 LINC00313P59037 77 aa2.82□□□□□ -1.96
SPG11-220ENST00000559933 CXCL6P80162 114 aa2.82□□□□□ -1.96
SPG11-220ENST00000559933 MUC17Q685J3 4493 aa2.81□□□□□ -1.96
SPG11-220ENST00000559933 TPRXLQ17RH7 258 aa2.81□□□□□ -1.96
SPG11-220ENST00000559933 ATP5EP2Q5VTU8 51 aa2.81□□□□□ -1.96
SPG11-220ENST00000559933 HCG22E2RYF7 251 aa2.8□□□□□ -1.96
SPG11-220ENST00000559933 C8orf87E5RJ46 101 aa2.8□□□□□ -1.96
SPG11-220ENST00000559933 NDUFB1O75438 58 aa2.8□□□□□ -1.96
SPG11-220ENST00000559933 CASC2Q6XLA1 102 aa2.8□□□□□ -1.96
SPG11-220ENST00000559933 hDV103S1A0JD37 113 aa2.79□□□□□ -1.96
SPG11-220ENST00000559933 NDUFS5O43920 106 aa2.78□□□□□ -1.96
SPG11-220ENST00000559933 TMEM254Q8TBM7 123 aa2.78□□□□□ -1.96
SPG11-220ENST00000559933 MRPL34Q9BQ48 92 aaKnown RBP2.78□□□□□ -1.96
SPG11-220ENST00000559933 FAM236AA0A1B0GUQ0 79 aa2.77□□□□□ -1.97
SPG11-220ENST00000559933 FAM236BA0A1B0GV22 79 aa2.77□□□□□ -1.97
SPG11-220ENST00000559933 A8MUU9 505 aa2.77□□□□□ -1.97
SPG11-220ENST00000559933 RPL37P61927 97 aaKnown RBP2.77□□□□□ -1.97
SPG11-220ENST00000559933 PCOTHQ58A44 107 aa2.77□□□□□ -1.97
SPG11-220ENST00000559933 C20orf166-AS1Q96NR2 134 aa2.77□□□□□ -1.97
SPG11-220ENST00000559933 KRTAP4-1Q9BYQ7 146 aa2.77□□□□□ -1.97
SPG11-220ENST00000559933 Q5W150 140 aa2.75□□□□□ -1.97
SPG11-220ENST00000559933 Q75L30 129 aa2.75□□□□□ -1.97
SPG11-220ENST00000559933 KRTAP10-5P60370 271 aa2.73□□□□□ -1.97
SPG11-220ENST00000559933 SEC61BP60468 96 aaKnown RBP2.73□□□□□ -1.97
SPG11-220ENST00000559933 ZCCHC13Q8WW36 166 aaKnown RBP2.73□□□□□ -1.97
SPG11-220ENST00000559933 ATP11AUNQ6ZP68 121 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms