RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 IGHV6-1A0A0B4J1U7 121 aa6.53□□□□□ -1.36
LRRC28-214ENST00000559433 KRTAP9-6A0A140TA67 174 aa6.53□□□□□ -1.36
LRRC28-214ENST00000559433 C9JAW5 83 aa6.53□□□□□ -1.36
LRRC28-214ENST00000559433 TSTD3H0UI37 97 aa6.52□□□□□ -1.37
LRRC28-214ENST00000559433 FLGP20930 4061 aaPredicted RBP6.51□□□□□ -1.37
LRRC28-214ENST00000559433 KRTAP16-1A8MUX0 517 aa6.51□□□□□ -1.37
LRRC28-214ENST00000559433 BATFQ16520 125 aa6.51□□□□□ -1.37
LRRC28-214ENST00000559433 NOTCH2NLQ7Z3S9 236 aa6.51□□□□□ -1.37
LRRC28-214ENST00000559433 LYRM7Q5U5X0 104 aa6.5□□□□□ -1.37
LRRC28-214ENST00000559433 JMJD7-PLA2G4BH0Y9G9 81 aa6.49□□□□□ -1.37
LRRC28-214ENST00000559433 KRTAP10-6P60371 365 aaPredicted RBP6.49□□□□□ -1.37
LRRC28-214ENST00000559433 A0A1B0GVX0 72 aa6.48□□□□□ -1.37
LRRC28-214ENST00000559433 C8orf87E5RJ46 101 aa6.47□□□□□ -1.37
LRRC28-214ENST00000559433 Q6ZQT0 140 aa6.47□□□□□ -1.37
LRRC28-214ENST00000559433 LOC110117498A0A087WWA1 95 aa6.46□□□□□ -1.38
LRRC28-214ENST00000559433 J3KT08 172 aa6.46□□□□□ -1.38
LRRC28-214ENST00000559433 LOC105371267A0A1B0GV96 52 aa6.45□□□□□ -1.38
LRRC28-214ENST00000559433 PDE6GP18545 87 aa6.44□□□□□ -1.38
LRRC28-214ENST00000559433 C14orf132Q9NPU4 83 aa6.44□□□□□ -1.38
LRRC28-214ENST00000559433 FAM236DA0A1B0GTK5 79 aa6.43□□□□□ -1.38
LRRC28-214ENST00000559433 NDUFB1O75438 58 aa6.43□□□□□ -1.38
LRRC28-214ENST00000559433 FAM236CP0DP71 79 aa6.43□□□□□ -1.38
LRRC28-214ENST00000559433 A0A1B0GW54 56 aa6.42□□□□□ -1.38
LRRC28-214ENST00000559433 KRTAP3-1Q9BYR8 98 aa6.41□□□□□ -1.38
LRRC28-214ENST00000559433 RBM12B-AS1Q9P1G2 102 aa6.41□□□□□ -1.38
LRRC28-214ENST00000559433 FSIP2Q5CZC0 6907 aa6.4□□□□□ -1.38
LRRC28-214ENST00000559433 LOC100996750A0A140TA64 210 aa6.4□□□□□ -1.38
LRRC28-214ENST00000559433 KRTAP4-6Q9BYQ5 205 aa6.4□□□□□ -1.38
LRRC28-214ENST00000559433 CRCT1Q9UGL9 99 aa6.4□□□□□ -1.38
LRRC28-214ENST00000559433 A0A1W2PPM0 123 aa6.39□□□□□ -1.39
LRRC28-214ENST00000559433 TAX1BP3O14907 124 aa6.39□□□□□ -1.39
LRRC28-214ENST00000559433 A8MWP4 228 aa6.38□□□□□ -1.39
LRRC28-214ENST00000559433 H3BT86 120 aa6.37□□□□□ -1.39
LRRC28-214ENST00000559433 MTURNQ8N3F0 131 aa6.37□□□□□ -1.39
LRRC28-214ENST00000559433 PCP4P48539 62 aa6.36□□□□□ -1.39
LRRC28-214ENST00000559433 NREPQ16612 68 aa6.36□□□□□ -1.39
LRRC28-214ENST00000559433 ZCCHC13Q8WW36 166 aaKnown RBP6.36□□□□□ -1.39
LRRC28-214ENST00000559433 C8orf17Q9NRJ1 99 aa6.36□□□□□ -1.39
LRRC28-214ENST00000559433 IGKV3D-7A0A0C4DH55 119 aa6.35□□□□□ -1.39
LRRC28-214ENST00000559433 HRES1P13985 223 aa6.35□□□□□ -1.39
LRRC28-214ENST00000559433 Q8N9P0 234 aaPredicted RBP6.34□□□□□ -1.39
LRRC28-214ENST00000559433 PRR15Q8IV56 129 aa6.32□□□□□ -1.4
LRRC28-214ENST00000559433 MPLKIPQ8TAP9 179 aa6.32□□□□□ -1.4
LRRC28-214ENST00000559433 Q6ZVQ6 151 aa6.31□□□□□ -1.4
LRRC28-214ENST00000559433 SPCS1Q9Y6A9 102 aa6.3□□□□□ -1.4
LRRC28-214ENST00000559433 SPINK7P58062 85 aa6.29□□□□□ -1.4
LRRC28-214ENST00000559433 MMP24-AS1A0A0U1RRL7 71 aa6.27□□□□□ -1.41
LRRC28-214ENST00000559433 K7EQZ3 153 aa6.27□□□□□ -1.41
LRRC28-214ENST00000559433 COL5A1-AS1Q5SY13 56 aa6.26□□□□□ -1.41
LRRC28-214ENST00000559433 TMEM254Q8TBM7 123 aa6.26□□□□□ -1.41
LRRC28-214ENST00000559433 BPY2O14599 106 aa6.25□□□□□ -1.41
LRRC28-214ENST00000559433 MRPL34Q9BQ48 92 aaKnown RBP6.25□□□□□ -1.41
LRRC28-214ENST00000559433 KRTAP9-8Q9BYQ0 159 aa6.25□□□□□ -1.41
LRRC28-214ENST00000559433 hDV103S1A0JD37 113 aa6.24□□□□□ -1.41
LRRC28-214ENST00000559433 NDUFS5O43920 106 aa6.23□□□□□ -1.41
LRRC28-214ENST00000559433 WFDC13Q8IUB5 93 aa6.22□□□□□ -1.41
LRRC28-214ENST00000559433 K7EP34 96 aa6.2□□□□□ -1.42
LRRC28-214ENST00000559433 KRTAP19-1Q8IUB9 90 aa6.2□□□□□ -1.42
LRRC28-214ENST00000559433 PRO0461Q9UI25 63 aa6.19□□□□□ -1.42
LRRC28-214ENST00000559433 MT2AP02795 61 aa6.18□□□□□ -1.42
LRRC28-214ENST00000559433 Q8N9L7 120 aa6.18□□□□□ -1.42
LRRC28-214ENST00000559433 KRTAP10-10P60014 251 aa6.17□□□□□ -1.42
LRRC28-214ENST00000559433 CASC2Q6XLA1 102 aa6.16□□□□□ -1.42
LRRC28-214ENST00000559433 UBL5Q9BZL1 73 aa6.15□□□□□ -1.42
LRRC28-214ENST00000559433 MT1FP04733 61 aa6.14□□□□□ -1.43
LRRC28-214ENST00000559433 LINC00846Q9NV44 126 aa6.14□□□□□ -1.43
LRRC28-214ENST00000559433 GTF2H5Q6ZYL4 71 aa6.13□□□□□ -1.43
LRRC28-214ENST00000559433 KRTAP4-8Q9BYQ9 185 aa6.13□□□□□ -1.43
LRRC28-214ENST00000559433 IGKV2D-30A0A075B6S6 120 aa6.12□□□□□ -1.43
LRRC28-214ENST00000559433 PCP4L1A6NKN8 68 aa6.12□□□□□ -1.43
LRRC28-214ENST00000559433 HCG22E2RYF7 251 aa6.12□□□□□ -1.43
LRRC28-214ENST00000559433 IGKV2-30P06310 120 aa6.12□□□□□ -1.43
LRRC28-214ENST00000559433 KRTAP4-12Q9BQ66 201 aa6.12□□□□□ -1.43
LRRC28-214ENST00000559433 Q5W150 140 aa6.11□□□□□ -1.43
LRRC28-214ENST00000559433 C7orf65Q6ZTY9 151 aa6.1□□□□□ -1.43
LRRC28-214ENST00000559433 USH2AO75445 5202 aa6.09□□□□□ -1.43
LRRC28-214ENST00000559433 H1FX-AS1Q4G0G2 97 aa6.08□□□□□ -1.44
LRRC28-214ENST00000559433 F8W1H4 67 aa6.07□□□□□ -1.44
LRRC28-214ENST00000559433 CXCL6P80162 114 aa6.07□□□□□ -1.44
LRRC28-214ENST00000559433 SSPOA2VEC9 5147 aa6.05□□□□□ -1.44
LRRC28-214ENST00000559433 A0A0A0MQY5 61 aa6.05□□□□□ -1.44
LRRC28-214ENST00000559433 ETDBQ3ZM63 59 aa6.05□□□□□ -1.44
LRRC28-214ENST00000559433 KRTAP9-3Q9BYQ3 159 aa6.05□□□□□ -1.44
LRRC28-214ENST00000559433 C4orf26Q17RF5 130 aa6□□□□□ -1.45
LRRC28-214ENST00000559433 LCE4AQ5TA78 99 aa5.99□□□□□ -1.45
LRRC28-214ENST00000559433 KRTAP9-7A8MTY7 169 aa5.98□□□□□ -1.45
LRRC28-214ENST00000559433 TP53AIP1Q9HCN2 124 aa5.96□□□□□ -1.46
LRRC28-214ENST00000559433 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.95□□□□□ -1.46
LRRC28-214ENST00000559433 ACYP1P07311 99 aa5.92□□□□□ -1.46
LRRC28-214ENST00000559433 FCGBPQ9Y6R7 5405 aaPredicted RBP5.9□□□□□ -1.46
LRRC28-214ENST00000559433 C1orf64Q8NEQ6 169 aa5.9□□□□□ -1.46
LRRC28-214ENST00000559433 FAM240AA0A1B0GVK7 77 aa5.89□□□□□ -1.47
LRRC28-214ENST00000559433 LCE3BQ5TA77 95 aa5.89□□□□□ -1.47
LRRC28-214ENST00000559433 C5orf47Q569G3 176 aa5.88□□□□□ -1.47
LRRC28-214ENST00000559433 ATP5EP2Q5VTU8 51 aa5.88□□□□□ -1.47
LRRC28-214ENST00000559433 S4R3F8 94 aa5.88□□□□□ -1.47
LRRC28-214ENST00000559433 FAM236AA0A1B0GUQ0 79 aa5.86□□□□□ -1.47
LRRC28-214ENST00000559433 FAM236BA0A1B0GV22 79 aa5.86□□□□□ -1.47
LRRC28-214ENST00000559433 TRAV22A0A0B4J277 110 aa5.85□□□□□ -1.47
LRRC28-214ENST00000559433 HIST1H4AP62805 103 aaKnown RBP5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms