RNA–Protein interactions for RNA: ENST00000559037.1

CASC4-207, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 680 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-207ENST00000559037 Q6ZRX8 168 aa3.04□□□□□ -1.92
CASC4-207ENST00000559037 Q8NDZ9 215 aa3.04□□□□□ -1.92
CASC4-207ENST00000559037 C22orf24Q9Y442 160 aa3.04□□□□□ -1.92
CASC4-207ENST00000559037 IGKV2-24A0A0C4DH68 120 aa3.03□□□□□ -1.92
CASC4-207ENST00000559037 SPRR1AP35321 89 aa3.03□□□□□ -1.92
CASC4-207ENST00000559037 Q6ZQT0 140 aa3.03□□□□□ -1.92
CASC4-207ENST00000559037 FAM19A5Q7Z5A7 132 aaPredicted RBP3.03□□□□□ -1.92
CASC4-207ENST00000559037 TRBV7-4A0A0J9YYF1 115 aa3.02□□□□□ -1.93
CASC4-207ENST00000559037 FAM236AA0A1B0GUQ0 79 aa3.02□□□□□ -1.93
CASC4-207ENST00000559037 FAM236BA0A1B0GV22 79 aa3.02□□□□□ -1.93
CASC4-207ENST00000559037 A0A1W2PNN7 141 aa3.02□□□□□ -1.93
CASC4-207ENST00000559037 FAM168BA1KXE4 195 aa3.02□□□□□ -1.93
CASC4-207ENST00000559037 UBE2BP63146 152 aa3.02□□□□□ -1.93
CASC4-207ENST00000559037 CXCL6P80162 114 aa3.02□□□□□ -1.93
CASC4-207ENST00000559037 SMIM20Q8N5G0 67 aa3.02□□□□□ -1.93
CASC4-207ENST00000559037 LINC00846Q9NV44 126 aa3.02□□□□□ -1.93
CASC4-207ENST00000559037 TNXBP22105 4242 aa3.01□□□□□ -1.93
CASC4-207ENST00000559037 H0Y9J4 135 aa3.01□□□□□ -1.93
CASC4-207ENST00000559037 BCE1O60756 84 aa3.01□□□□□ -1.93
CASC4-207ENST00000559037 SMCR5Q8TEV8 140 aa3.01□□□□□ -1.93
CASC4-207ENST00000559037 IGLV5-48A0A075B6I7 105 aa3□□□□□ -1.93
CASC4-207ENST00000559037 UQCRQO14949 82 aa3□□□□□ -1.93
CASC4-207ENST00000559037 KRTAP10-8P60410 259 aa3□□□□□ -1.93
CASC4-207ENST00000559037 HIST1H4AP62805 103 aaKnown RBP3□□□□□ -1.93
CASC4-207ENST00000559037 KRTAP13-3Q3SY46 172 aa3□□□□□ -1.93
CASC4-207ENST00000559037 C5orf47Q569G3 176 aa3□□□□□ -1.93
CASC4-207ENST00000559037 SPINK6Q6UWN8 80 aa3□□□□□ -1.93
CASC4-207ENST00000559037 FAM19A1Q7Z5A9 133 aa3□□□□□ -1.93
CASC4-207ENST00000559037 ANAPC11Q9NYG5 84 aa3□□□□□ -1.93
CASC4-207ENST00000559037 KRTAP4-16G5E9R7 235 aaPredicted RBP2.99□□□□□ -1.93
CASC4-207ENST00000559037 UBE2AP49459 152 aa2.99□□□□□ -1.93
CASC4-207ENST00000559037 RPS28P62857 69 aaKnown RBP2.99□□□□□ -1.93
CASC4-207ENST00000559037 NREPQ16612 68 aa2.99□□□□□ -1.93
CASC4-207ENST00000559037 ZNF706Q9Y5V0 76 aaPredicted RBP2.99□□□□□ -1.93
CASC4-207ENST00000559037 OBSCNQ5VST9 7968 aa2.99□□□□□ -1.93
CASC4-207ENST00000559037 IGKV3D-7A0A0C4DH55 119 aa2.98□□□□□ -1.93
CASC4-207ENST00000559037 C1orf137Q5JT78 98 aa2.98□□□□□ -1.93
CASC4-207ENST00000559037 KRTAP11-1Q8IUC1 163 aa2.98□□□□□ -1.93
CASC4-207ENST00000559037 DEFB105AQ8NG35 78 aa2.98□□□□□ -1.93
CASC4-207ENST00000559037 PSORS1C2Q9UIG4 136 aa2.98□□□□□ -1.93
CASC4-207ENST00000559037 BPY2O14599 106 aa2.97□□□□□ -1.93
CASC4-207ENST00000559037 COX7CP15954 63 aa2.97□□□□□ -1.93
CASC4-207ENST00000559037 C9orf153Q5TBE3 101 aa2.97□□□□□ -1.93
CASC4-207ENST00000559037 PHF5AQ7RTV0 110 aaKnown RBP2.97□□□□□ -1.93
CASC4-207ENST00000559037 C3orf22Q8N5N4 141 aa2.97□□□□□ -1.93
CASC4-207ENST00000559037 SERP2Q8N6R1 65 aa2.97□□□□□ -1.93
CASC4-207ENST00000559037 Q9BRP9 147 aa2.97□□□□□ -1.93
CASC4-207ENST00000559037 SS18L2Q9UHA2 77 aa2.97□□□□□ -1.93
CASC4-207ENST00000559037 IGLV7-43P04211 117 aa2.96□□□□□ -1.94
CASC4-207ENST00000559037 HIGD2AQ9BW72 106 aa2.96□□□□□ -1.94
CASC4-207ENST00000559037 HMCN2Q8NDA2 5059 aa2.96□□□□□ -1.94
CASC4-207ENST00000559037 IGLV8-61A0A075B6I0 122 aa2.95□□□□□ -1.94
CASC4-207ENST00000559037 SPRR1BP22528 89 aa2.95□□□□□ -1.94
CASC4-207ENST00000559037 SPRR4Q96PI1 79 aa2.95□□□□□ -1.94
CASC4-207ENST00000559037 KRTAP4-3Q9BYR4 195 aa2.95□□□□□ -1.94
CASC4-207ENST00000559037 TRAV7A0A075B6U4 112 aa2.94□□□□□ -1.94
CASC4-207ENST00000559037 J3KT08 172 aa2.94□□□□□ -1.94
CASC4-207ENST00000559037 CRYGAP11844 174 aa2.94□□□□□ -1.94
CASC4-207ENST00000559037 PRLHP81277 87 aa2.94□□□□□ -1.94
CASC4-207ENST00000559037 KRTAP5-2Q701N4 177 aa2.94□□□□□ -1.94
CASC4-207ENST00000559037 UBR4Q5T4S7 5183 aa2.94□□□□□ -1.94
CASC4-207ENST00000559037 A0A087WVE0 104 aa2.93□□□□□ -1.94
CASC4-207ENST00000559037 CCDC179H3BU77 68 aa2.93□□□□□ -1.94
CASC4-207ENST00000559037 NDUFC1O43677 76 aa2.93□□□□□ -1.94
CASC4-207ENST00000559037 TMEM258P61165 79 aa2.93□□□□□ -1.94
CASC4-207ENST00000559037 ST20-AS1Q8NBB2 130 aa2.93□□□□□ -1.94
CASC4-207ENST00000559037 LRP2P98164 4655 aa2.93□□□□□ -1.94
CASC4-207ENST00000559037 ERC2-IT1O76042 136 aa2.92□□□□□ -1.94
CASC4-207ENST00000559037 A0A1W2PNM2 257 aa2.91□□□□□ -1.94
CASC4-207ENST00000559037 ZNF861PO60384 105 aa2.91□□□□□ -1.94
CASC4-207ENST00000559037 ATP5EP56381 51 aaPredicted RBP2.91□□□□□ -1.94
CASC4-207ENST00000559037 IGFL1Q6UW32 110 aa2.91□□□□□ -1.94
CASC4-207ENST00000559037 NDUFB1O75438 58 aa2.9□□□□□ -1.95
CASC4-207ENST00000559037 IGKV4-1P06312 121 aa2.9□□□□□ -1.95
CASC4-207ENST00000559037 LINC00483Q53H64 154 aa2.9□□□□□ -1.95
CASC4-207ENST00000559037 KRTAP13-1Q8IUC0 172 aa2.9□□□□□ -1.95
CASC4-207ENST00000559037 A0A087WSZ3 146 aa2.89□□□□□ -1.95
CASC4-207ENST00000559037 KLKP1Q107X0 134 aa2.89□□□□□ -1.95
CASC4-207ENST00000559037 LCE3AQ5TA76 89 aa2.89□□□□□ -1.95
CASC4-207ENST00000559037 LPAP08519 4548 aa2.89□□□□□ -1.95
CASC4-207ENST00000559037 HCG22E2RYF7 251 aa2.88□□□□□ -1.95
CASC4-207ENST00000559037 C20orf197Q8N268 126 aa2.87□□□□□ -1.95
CASC4-207ENST00000559037 A8MWP4 228 aa2.86□□□□□ -1.95
CASC4-207ENST00000559037 H3BPC8 53 aa2.86□□□□□ -1.95
CASC4-207ENST00000559037 MP68P56378 58 aa2.86□□□□□ -1.95
CASC4-207ENST00000559037 CD164Q04900 197 aa2.86□□□□□ -1.95
CASC4-207ENST00000559037 MOBPQ13875 183 aa2.86□□□□□ -1.95
CASC4-207ENST00000559037 TMEM254Q8TBM7 123 aa2.86□□□□□ -1.95
CASC4-207ENST00000559037 FAM236DA0A1B0GTK5 79 aa2.85□□□□□ -1.95
CASC4-207ENST00000559037 K7EQZ3 153 aa2.85□□□□□ -1.95
CASC4-207ENST00000559037 FAM236CP0DP71 79 aa2.85□□□□□ -1.95
CASC4-207ENST00000559037 FAM229BQ4G0N7 80 aa2.85□□□□□ -1.95
CASC4-207ENST00000559037 SSBP3-AS1Q7Z2R9 100 aa2.85□□□□□ -1.95
CASC4-207ENST00000559037 PRR15Q8IV56 129 aa2.85□□□□□ -1.95
CASC4-207ENST00000559037 Q8N9L7 120 aa2.85□□□□□ -1.95
CASC4-207ENST00000559037 KRTAP13-2Q52LG2 175 aa2.84□□□□□ -1.95
CASC4-207ENST00000559037 CASC2Q6XLA1 102 aa2.84□□□□□ -1.95
CASC4-207ENST00000559037 LINC00472Q9H8W2 130 aa2.84□□□□□ -1.95
CASC4-207ENST00000559037 TP53AIP1Q9HCN2 124 aa2.84□□□□□ -1.95
CASC4-207ENST00000559037 PRO0628Q9UI54 55 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms