RNA–Protein interactions for RNA: ENST00000558880.1

TRAF3-206, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-206ENST00000558880 Q5XG85 94 aa4.08□□□□□ -1.76
TRAF3-206ENST00000558880 Q6JHZ5 121 aa4.08□□□□□ -1.76
TRAF3-206ENST00000558880 Q6Q795 121 aa4.08□□□□□ -1.76
TRAF3-206ENST00000558880 FAT4Q6V0I7 4981 aa4.07□□□□□ -1.76
TRAF3-206ENST00000558880 MUC17Q685J3 4493 aa4.07□□□□□ -1.76
TRAF3-206ENST00000558880 SPINK1P00995 79 aa4.07□□□□□ -1.76
TRAF3-206ENST00000558880 SPAG11AQ6PDA7 123 aa4.07□□□□□ -1.76
TRAF3-206ENST00000558880 HRCT1Q6UXD1 115 aa4.07□□□□□ -1.76
TRAF3-206ENST00000558880 Q6ZQT0 140 aa4.07□□□□□ -1.76
TRAF3-206ENST00000558880 FSIP2Q5CZC0 6907 aa4.07□□□□□ -1.76
TRAF3-206ENST00000558880 LOC110117498A0A087WWA1 95 aa4.06□□□□□ -1.76
TRAF3-206ENST00000558880 TRBV7-7A0A0K0K1E9 115 aa4.06□□□□□ -1.76
TRAF3-206ENST00000558880 RETNLBQ9BQ08 111 aa4.06□□□□□ -1.76
TRAF3-206ENST00000558880 CRCT1Q9UGL9 99 aa4.06□□□□□ -1.76
TRAF3-206ENST00000558880 F8WEM9 126 aa4.05□□□□□ -1.76
TRAF3-206ENST00000558880 RBM3P98179 157 aaKnown RBP4.05□□□□□ -1.76
TRAF3-206ENST00000558880 GTF2H5Q6ZYL4 71 aa4.05□□□□□ -1.76
TRAF3-206ENST00000558880 Q96NJ1 140 aa4.05□□□□□ -1.76
TRAF3-206ENST00000558880 C14orf132Q9NPU4 83 aa4.05□□□□□ -1.76
TRAF3-206ENST00000558880 F8W1H4 67 aa4.04□□□□□ -1.76
TRAF3-206ENST00000558880 JMJD7-PLA2G4BH0Y9G9 81 aa4.04□□□□□ -1.76
TRAF3-206ENST00000558880 C1orf195Q5TG92 126 aa4.04□□□□□ -1.76
TRAF3-206ENST00000558880 TEN1Q86WV5 123 aa4.04□□□□□ -1.76
TRAF3-206ENST00000558880 A0A087WSZ3 146 aa4.03□□□□□ -1.76
TRAF3-206ENST00000558880 ETDBQ3ZM63 59 aa4.03□□□□□ -1.76
TRAF3-206ENST00000558880 ASB16-AS1Q495Z4 193 aa4.03□□□□□ -1.76
TRAF3-206ENST00000558880 MUC2Q02817 5179 aa4.03□□□□□ -1.76
TRAF3-206ENST00000558880 CCKP06307 115 aa4.02□□□□□ -1.77
TRAF3-206ENST00000558880 DSCR8Q96T75 97 aa4.01□□□□□ -1.77
TRAF3-206ENST00000558880 LINC00472Q9H8W2 130 aa4.01□□□□□ -1.77
TRAF3-206ENST00000558880 KRTAP13-3Q3SY46 172 aa3.99□□□□□ -1.77
TRAF3-206ENST00000558880 PDE6GP18545 87 aa3.98□□□□□ -1.77
TRAF3-206ENST00000558880 KRTAP10-6P60371 365 aaPredicted RBP3.98□□□□□ -1.77
TRAF3-206ENST00000558880 LIMD2Q9BT23 127 aa3.98□□□□□ -1.77
TRAF3-206ENST00000558880 IGLV7-46A0A075B6I9 117 aa3.97□□□□□ -1.77
TRAF3-206ENST00000558880 PRR4Q16378 134 aa3.97□□□□□ -1.77
TRAF3-206ENST00000558880 FP248Q71RG6 208 aaPredicted RBP3.97□□□□□ -1.77
TRAF3-206ENST00000558880 VPS25Q9BRG1 176 aa3.97□□□□□ -1.77
TRAF3-206ENST00000558880 LINC00846Q9NV44 126 aa3.97□□□□□ -1.77
TRAF3-206ENST00000558880 A0A1B0GW54 56 aa3.96□□□□□ -1.78
TRAF3-206ENST00000558880 DEFB116Q30KQ4 102 aa3.96□□□□□ -1.78
TRAF3-206ENST00000558880 TPRXLQ17RH7 258 aa3.95□□□□□ -1.78
TRAF3-206ENST00000558880 NOTCH2NLQ7Z3S9 236 aa3.95□□□□□ -1.78
TRAF3-206ENST00000558880 MT3P25713 68 aa3.94□□□□□ -1.78
TRAF3-206ENST00000558880 DSCR10P59022 87 aa3.94□□□□□ -1.78
TRAF3-206ENST00000558880 KRTAP10-7P60409 375 aaPredicted RBP3.94□□□□□ -1.78
TRAF3-206ENST00000558880 SS18L2Q9UHA2 77 aa3.94□□□□□ -1.78
TRAF3-206ENST00000558880 KRTAP16-1A8MUX0 517 aa3.93□□□□□ -1.78
TRAF3-206ENST00000558880 Q6ZVQ6 151 aa3.93□□□□□ -1.78
TRAF3-206ENST00000558880 IGKV3D-7A0A0C4DH55 119 aa3.91□□□□□ -1.78
TRAF3-206ENST00000558880 IGKV4-1P06312 121 aa3.91□□□□□ -1.78
TRAF3-206ENST00000558880 FAM240AA0A1B0GVK7 77 aa3.9□□□□□ -1.79
TRAF3-206ENST00000558880 C9orf92A6NGG3 77 aa3.9□□□□□ -1.79
TRAF3-206ENST00000558880 NREPQ16612 68 aa3.89□□□□□ -1.79
TRAF3-206ENST00000558880 A8MWP4 228 aa3.88□□□□□ -1.79
TRAF3-206ENST00000558880 K7EQZ3 153 aa3.88□□□□□ -1.79
TRAF3-206ENST00000558880 SEC61BP60468 96 aaKnown RBP3.88□□□□□ -1.79
TRAF3-206ENST00000558880 Q8N9L7 120 aa3.88□□□□□ -1.79
TRAF3-206ENST00000558880 KRTAP4-1Q9BYQ7 146 aa3.88□□□□□ -1.79
TRAF3-206ENST00000558880 A0A1B0GVX0 72 aa3.87□□□□□ -1.79
TRAF3-206ENST00000558880 J3KT08 172 aa3.87□□□□□ -1.79
TRAF3-206ENST00000558880 PRR15Q8IV56 129 aa3.87□□□□□ -1.79
TRAF3-206ENST00000558880 SIGMAR1Q99720 223 aa3.87□□□□□ -1.79
TRAF3-206ENST00000558880 MMP24-AS1A0A0U1RRL7 71 aa3.86□□□□□ -1.79
TRAF3-206ENST00000558880 ACYP1P07311 99 aa3.86□□□□□ -1.79
TRAF3-206ENST00000558880 C20orf166-AS1Q96NR2 134 aa3.86□□□□□ -1.79
TRAF3-206ENST00000558880 IGHV6-1A0A0B4J1U7 121 aa3.85□□□□□ -1.79
TRAF3-206ENST00000558880 A8MUU9 505 aa3.85□□□□□ -1.79
TRAF3-206ENST00000558880 BPY2O14599 106 aa3.85□□□□□ -1.79
TRAF3-206ENST00000558880 LINC00313P59037 77 aa3.84□□□□□ -1.79
TRAF3-206ENST00000558880 RPL37P61927 97 aaKnown RBP3.84□□□□□ -1.79
TRAF3-206ENST00000558880 UBL5Q9BZL1 73 aa3.84□□□□□ -1.79
TRAF3-206ENST00000558880 C8orf17Q9NRJ1 99 aa3.84□□□□□ -1.79
TRAF3-206ENST00000558880 Q75L30 129 aa3.83□□□□□ -1.8
TRAF3-206ENST00000558880 C8orf87E5RJ46 101 aa3.82□□□□□ -1.8
TRAF3-206ENST00000558880 CXCL6P80162 114 aa3.82□□□□□ -1.8
TRAF3-206ENST00000558880 LINC00643Q86TS7 51 aa3.81□□□□□ -1.8
TRAF3-206ENST00000558880 PCOTHQ58A44 107 aa3.8□□□□□ -1.8
TRAF3-206ENST00000558880 KRTAP5-11Q6L8G4 156 aa3.8□□□□□ -1.8
TRAF3-206ENST00000558880 NDUFB1O75438 58 aa3.79□□□□□ -1.8
TRAF3-206ENST00000558880 KRTAP19-2Q3LHN2 52 aa3.79□□□□□ -1.8
TRAF3-206ENST00000558880 TMEM254Q8TBM7 123 aa3.79□□□□□ -1.8
TRAF3-206ENST00000558880 A0A087WVE0 104 aa3.78□□□□□ -1.8
TRAF3-206ENST00000558880 J3QR89 54 aa3.78□□□□□ -1.8
TRAF3-206ENST00000558880 MRPL34Q9BQ48 92 aaKnown RBP3.78□□□□□ -1.8
TRAF3-206ENST00000558880 hDV103S1A0JD37 113 aa3.77□□□□□ -1.81
TRAF3-206ENST00000558880 K7ERU9 68 aa3.77□□□□□ -1.81
TRAF3-206ENST00000558880 MT-ATP8P03928 68 aa3.77□□□□□ -1.81
TRAF3-206ENST00000558880 ATP5EP2Q5VTU8 51 aa3.77□□□□□ -1.81
TRAF3-206ENST00000558880 Q5W150 140 aa3.77□□□□□ -1.81
TRAF3-206ENST00000558880 WFDC13Q8IUB5 93 aa3.77□□□□□ -1.81
TRAF3-206ENST00000558880 HCG22E2RYF7 251 aa3.76□□□□□ -1.81
TRAF3-206ENST00000558880 CASC2Q6XLA1 102 aa3.75□□□□□ -1.81
TRAF3-206ENST00000558880 LCE1EQ5T753 118 aa3.74□□□□□ -1.81
TRAF3-206ENST00000558880 ZCCHC13Q8WW36 166 aaKnown RBP3.74□□□□□ -1.81
TRAF3-206ENST00000558880 FLGP20930 4061 aaPredicted RBP3.74□□□□□ -1.81
TRAF3-206ENST00000558880 HRES1P13985 223 aa3.71□□□□□ -1.82
TRAF3-206ENST00000558880 HIST1H4AP62805 103 aaKnown RBP3.71□□□□□ -1.82
TRAF3-206ENST00000558880 ATP11AUNQ6ZP68 121 aa3.71□□□□□ -1.82
TRAF3-206ENST00000558880 OCR1Q9BZK8 76 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms