RNA–Protein interactions for RNA: ENST00000558439.5

AP4E1-202, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,165 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-202ENST00000558439 IGLV7-46A0A075B6I9 117 aa9.27□□□□□ -0.93
AP4E1-202ENST00000558439 A0A1B0GU69 56 aa9.26□□□□□ -0.93
AP4E1-202ENST00000558439 Q8N9P0 234 aaPredicted RBP9.25□□□□□ -0.93
AP4E1-202ENST00000558439 A0A087X002 238 aa9.25□□□□□ -0.93
AP4E1-202ENST00000558439 NOTCH2NLQ7Z3S9 236 aa9.25□□□□□ -0.93
AP4E1-202ENST00000558439 KRTAP10-2P60368 255 aa9.21□□□□□ -0.93
AP4E1-202ENST00000558439 LCE6AA0A183 80 aa9.21□□□□□ -0.94
AP4E1-202ENST00000558439 LINC00483Q53H64 154 aa9.17□□□□□ -0.94
AP4E1-202ENST00000558439 KRTAP13-1Q8IUC0 172 aa9.17□□□□□ -0.94
AP4E1-202ENST00000558439 Q5VV11 94 aa9.16□□□□□ -0.94
AP4E1-202ENST00000558439 Q6ZR54 194 aa9.16□□□□□ -0.94
AP4E1-202ENST00000558439 HRES1P13985 223 aa9.15□□□□□ -0.94
AP4E1-202ENST00000558439 C9orf92A6NGG3 77 aa9.14□□□□□ -0.95
AP4E1-202ENST00000558439 LINC00304Q8N9R0 145 aa9.11□□□□□ -0.95
AP4E1-202ENST00000558439 KRTAP10-1P60331 282 aa9.11□□□□□ -0.95
AP4E1-202ENST00000558439 Q5W150 140 aa9.1□□□□□ -0.95
AP4E1-202ENST00000558439 Q8N1X5 172 aa9.1□□□□□ -0.95
AP4E1-202ENST00000558439 ATP11AUNQ6ZP68 121 aa9.09□□□□□ -0.95
AP4E1-202ENST00000558439 CSMD3Q7Z407 3707 aa9.08□□□□□ -0.96
AP4E1-202ENST00000558439 COL7A1Q02388 2944 aa9.05□□□□□ -0.96
AP4E1-202ENST00000558439 A8MU10 97 aa9.04□□□□□ -0.96
AP4E1-202ENST00000558439 DMBT1Q9UGM3 2413 aaPredicted RBP9.04□□□□□ -0.96
AP4E1-202ENST00000558439 Q75L30 129 aa9.03□□□□□ -0.96
AP4E1-202ENST00000558439 CDC42SE1Q9NRR8 79 aa9.03□□□□□ -0.96
AP4E1-202ENST00000558439 LINC01558Q9Y6Z2 57 aa9.02□□□□□ -0.96
AP4E1-202ENST00000558439 SPINK7P58062 85 aa9.02□□□□□ -0.97
AP4E1-202ENST00000558439 FBN3Q75N90 2809 aa9.01□□□□□ -0.97
AP4E1-202ENST00000558439 UQCR11O14957 56 aa8.99□□□□□ -0.97
AP4E1-202ENST00000558439 MIR22HGQ0VDD5 57 aa8.96□□□□□ -0.97
AP4E1-202ENST00000558439 K7ERS5 55 aa8.94□□□□□ -0.98
AP4E1-202ENST00000558439 KTN1-AS1Q86SY8 53 aa8.94□□□□□ -0.98
AP4E1-202ENST00000558439 LCA10Q71F78 164 aa8.92□□□□□ -0.98
AP4E1-202ENST00000558439 KRTAP13-2Q52LG2 175 aa8.92□□□□□ -0.98
AP4E1-202ENST00000558439 MEGF8Q7Z7M0 2845 aa8.87□□□□□ -0.99
AP4E1-202ENST00000558439 FLG2Q5D862 2391 aaPredicted RBP8.85□□□□□ -0.99
AP4E1-202ENST00000558439 DMAC1Q96GE9 116 aa8.84□□□□□ -0.99
AP4E1-202ENST00000558439 ASB16-AS1Q495Z4 193 aa8.79□□□□□ -1
AP4E1-202ENST00000558439 PRAC1Q96KF2 57 aa8.78□□□□□ -1
AP4E1-202ENST00000558439 HUWE1Q7Z6Z7 4374 aaKnown RBP8.76□□□□□ -1.01
AP4E1-202ENST00000558439 RBM12B-AS1Q9P1G2 102 aa8.75□□□□□ -1.01
AP4E1-202ENST00000558439 KRTAP1-4P0C5Y4 121 aa8.66□□□□□ -1.02
AP4E1-202ENST00000558439 Q6ZSA8 131 aa8.64□□□□□ -1.03
AP4E1-202ENST00000558439 A0A1B0GU33 70 aa8.63□□□□□ -1.03
AP4E1-202ENST00000558439 A0A0D9SG42 100 aa8.62□□□□□ -1.03
AP4E1-202ENST00000558439 DNAH10Q8IVF4 4471 aa8.61□□□□□ -1.03
AP4E1-202ENST00000558439 A6NN06 94 aa8.6□□□□□ -1.03
AP4E1-202ENST00000558439 ANK2Q01484 3957 aa8.57□□□□□ -1.04
AP4E1-202ENST00000558439 ADM2Q7Z4H4 148 aa8.53□□□□□ -1.04
AP4E1-202ENST00000558439 KRTAP13-3Q3SY46 172 aa8.52□□□□□ -1.05
AP4E1-202ENST00000558439 SPATA8Q6RVD6 105 aa8.52□□□□□ -1.05
AP4E1-202ENST00000558439 KRTAP16-1A8MUX0 517 aa8.51□□□□□ -1.05
AP4E1-202ENST00000558439 CSAG1Q6PB30 78 aa8.5□□□□□ -1.05
AP4E1-202ENST00000558439 CRIPTQ9P021 101 aa8.49□□□□□ -1.05
AP4E1-202ENST00000558439 H3BS24 57 aa8.48□□□□□ -1.05
AP4E1-202ENST00000558439 Q5VSD8 79 aa8.48□□□□□ -1.05
AP4E1-202ENST00000558439 DNAH9Q9NYC9 4486 aa8.47□□□□□ -1.05
AP4E1-202ENST00000558439 PLECQ15149 4684 aaKnown RBP8.45□□□□□ -1.06
AP4E1-202ENST00000558439 LINC01554Q52M75 96 aa8.42□□□□□ -1.06
AP4E1-202ENST00000558439 RPS29P62273 56 aaKnown RBP8.42□□□□□ -1.06
AP4E1-202ENST00000558439 COX6B2Q6YFQ2 88 aa8.42□□□□□ -1.06
AP4E1-202ENST00000558439 SPINT4Q6UDR6 99 aa8.4□□□□□ -1.07
AP4E1-202ENST00000558439 H1FX-AS1Q4G0G2 97 aa8.39□□□□□ -1.07
AP4E1-202ENST00000558439 A8MUU9 505 aa8.36□□□□□ -1.07
AP4E1-202ENST00000558439 S4R3F8 94 aa8.34□□□□□ -1.07
AP4E1-202ENST00000558439 C20orf166-AS1Q96NR2 134 aa8.33□□□□□ -1.08
AP4E1-202ENST00000558439 LYSTQ99698 3801 aa8.33□□□□□ -1.08
AP4E1-202ENST00000558439 J3QL48 77 aa8.3□□□□□ -1.08
AP4E1-202ENST00000558439 DNAH1Q9P2D7 4330 aa8.3□□□□□ -1.08
AP4E1-202ENST00000558439 STARD9Q9P2P6 4700 aa8.25□□□□□ -1.09
AP4E1-202ENST00000558439 RPL37P61927 97 aaKnown RBP8.22□□□□□ -1.09
AP4E1-202ENST00000558439 DNAH11Q96DT5 4516 aa8.22□□□□□ -1.09
AP4E1-202ENST00000558439 CMYA5Q8N3K9 4069 aa8.2□□□□□ -1.1
AP4E1-202ENST00000558439 H0YAA0 97 aa8.18□□□□□ -1.1
AP4E1-202ENST00000558439 PRKDCP78527 4128 aaKnown RBP8.18□□□□□ -1.1
AP4E1-202ENST00000558439 KRTAP21-3Q3LHN1 58 aa8.16□□□□□ -1.1
AP4E1-202ENST00000558439 KMT2AQ03164 3969 aa8.15□□□□□ -1.11
AP4E1-202ENST00000558439 DNAH3Q8TD57 4116 aa8.13□□□□□ -1.11
AP4E1-202ENST00000558439 VPS13DQ5THJ4 4388 aa8.12□□□□□ -1.11
AP4E1-202ENST00000558439 DNHD1Q96M86 4753 aa8.11□□□□□ -1.11
AP4E1-202ENST00000558439 ROMO1P60602 79 aa8.11□□□□□ -1.11
AP4E1-202ENST00000558439 A0A1B0GVY2 172 aa8.11□□□□□ -1.11
AP4E1-202ENST00000558439 DNAH7Q8WXX0 4024 aa8.1□□□□□ -1.11
AP4E1-202ENST00000558439 XP32Q5T750 250 aa8.08□□□□□ -1.12
AP4E1-202ENST00000558439 KRTAP3-1Q9BYR8 98 aa8.07□□□□□ -1.12
AP4E1-202ENST00000558439 DNAH8Q96JB1 4490 aa8.06□□□□□ -1.12
AP4E1-202ENST00000558439 KRTAP25-1Q3LHN0 102 aa8.05□□□□□ -1.12
AP4E1-202ENST00000558439 R4GN34 69 aa8.03□□□□□ -1.12
AP4E1-202ENST00000558439 DNAH17Q9UFH2 4485 aa8.02□□□□□ -1.13
AP4E1-202ENST00000558439 FRAS1Q86XX4 4008 aa8□□□□□ -1.13
AP4E1-202ENST00000558439 LRP1BQ9NZR2 4599 aa8□□□□□ -1.13
AP4E1-202ENST00000558439 M0QZ58 72 aa8□□□□□ -1.13
AP4E1-202ENST00000558439 DNAH5Q8TE73 4624 aa7.96□□□□□ -1.13
AP4E1-202ENST00000558439 DNAH2Q9P225 4427 aa7.96□□□□□ -1.14
AP4E1-202ENST00000558439 KRTAP10-8P60410 259 aa7.96□□□□□ -1.14
AP4E1-202ENST00000558439 SEC61BP60468 96 aaKnown RBP7.94□□□□□ -1.14
AP4E1-202ENST00000558439 P0C880 135 aa7.93□□□□□ -1.14
AP4E1-202ENST00000558439 CAMK2N1Q7Z7J9 78 aa7.89□□□□□ -1.15
AP4E1-202ENST00000558439 FAT1Q14517 4588 aa7.89□□□□□ -1.15
AP4E1-202ENST00000558439 DNAH6Q9C0G6 4158 aa7.87□□□□□ -1.15
AP4E1-202ENST00000558439 C10orf95Q9H7T3 257 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms