RNA–Protein interactions for RNA: ENST00000558373.5

CTDSPL2-202, Transcript of CTD small phosphatase like 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSPL2, Length 4,255 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-202ENST00000558373 PLNP26678 52 aa0.44□□□□□ -2.34
CTDSPL2-202ENST00000558373 ATXN8Q156A1 80 aa0.44□□□□□ -2.34
CTDSPL2-202ENST00000558373 INTS1Q8N201 2190 aaKnown RBP0.44□□□□□ -2.34
CTDSPL2-202ENST00000558373 PI4KAP42356 2102 aa0.44□□□□□ -2.34
CTDSPL2-202ENST00000558373 HRNRQ86YZ3 2850 aaPredicted RBP0.44□□□□□ -2.34
CTDSPL2-202ENST00000558373 DEFB131BA0A096LNP1 70 aa0.44□□□□□ -2.34
CTDSPL2-202ENST00000558373 I3L3M4 83 aa0.44□□□□□ -2.34
CTDSPL2-202ENST00000558373 Q5VSD8 79 aa0.44□□□□□ -2.34
CTDSPL2-202ENST00000558373 SMIM11BQ8TCY0 68 aa0.44□□□□□ -2.34
CTDSPL2-202ENST00000558373 SMIM2Q9BVW6 85 aa0.44□□□□□ -2.34
CTDSPL2-202ENST00000558373 PIEZO2Q9H5I5 2752 aa0.44□□□□□ -2.34
CTDSPL2-202ENST00000558373 MYO7AQ13402 2215 aa0.44□□□□□ -2.34
CTDSPL2-202ENST00000558373 MUC4Q99102 2169 aa0.44□□□□□ -2.34
CTDSPL2-202ENST00000558373 ARMS2P0C7Q2 107 aa0.44□□□□□ -2.34
CTDSPL2-202ENST00000558373 IAPPP10997 89 aa0.44□□□□□ -2.34
CTDSPL2-202ENST00000558373 PRCDQ00LT1 54 aa0.44□□□□□ -2.34
CTDSPL2-202ENST00000558373 TFF3Q07654 80 aa0.44□□□□□ -2.34
CTDSPL2-202ENST00000558373 RIF1Q5UIP0 2472 aaKnown RBP0.44□□□□□ -2.34
CTDSPL2-202ENST00000558373 ABCA2Q9BZC7 2435 aa0.44□□□□□ -2.34
CTDSPL2-202ENST00000558373 FREM3P0C091 2139 aa0.44□□□□□ -2.34
CTDSPL2-202ENST00000558373 A0A087WVE0 104 aa0.44□□□□□ -2.34
CTDSPL2-202ENST00000558373 A0A1B0GWA3 101 aa0.44□□□□□ -2.34
CTDSPL2-202ENST00000558373 IFI27P40305 119 aaPredicted RBP0.44□□□□□ -2.34
CTDSPL2-202ENST00000558373 SPINK7P58062 85 aa0.44□□□□□ -2.34
CTDSPL2-202ENST00000558373 DEFB136Q30KP8 78 aa0.44□□□□□ -2.34
CTDSPL2-202ENST00000558373 C10orf128Q5T292 105 aa0.44□□□□□ -2.34
CTDSPL2-202ENST00000558373 RPS27LQ71UM5 84 aaKnown RBP0.44□□□□□ -2.34
CTDSPL2-202ENST00000558373 C6orf201Q7Z4U5 140 aa0.44□□□□□ -2.34
CTDSPL2-202ENST00000558373 HILPDAQ9Y5L2 63 aa0.44□□□□□ -2.34
CTDSPL2-202ENST00000558373 H0YAA0 97 aa0.43□□□□□ -2.34
CTDSPL2-202ENST00000558373 ADIRFQ15847 76 aa0.43□□□□□ -2.34
CTDSPL2-202ENST00000558373 RP1P56715 2156 aa0.43□□□□□ -2.34
CTDSPL2-202ENST00000558373 SETXQ7Z333 2677 aaKnown RBP0.43□□□□□ -2.34
CTDSPL2-202ENST00000558373 GVQW2A0A096LPI5 108 aaPredicted RBP0.43□□□□□ -2.34
CTDSPL2-202ENST00000558373 I3L2K1 104 aa0.43□□□□□ -2.34
CTDSPL2-202ENST00000558373 DEFB124Q8NES8 71 aa0.43□□□□□ -2.34
CTDSPL2-202ENST00000558373 COX7B2Q8TF08 81 aa0.43□□□□□ -2.34
CTDSPL2-202ENST00000558373 HELZ2Q9BYK8 2649 aaKnown RBP0.43□□□□□ -2.34
CTDSPL2-202ENST00000558373 TECTAO75443 2155 aa0.43□□□□□ -2.34
CTDSPL2-202ENST00000558373 POLEQ07864 2286 aa0.43□□□□□ -2.34
CTDSPL2-202ENST00000558373 ALPK2Q86TB3 2170 aa0.42□□□□□ -2.34
CTDSPL2-202ENST00000558373 CADP27708 2225 aa0.42□□□□□ -2.34
CTDSPL2-202ENST00000558373 TRAV21A0A0B4J279 112 aa0.42□□□□□ -2.34
CTDSPL2-202ENST00000558373 SPTY2D1-AS1A0A0U1RR47 76 aa0.42□□□□□ -2.34
CTDSPL2-202ENST00000558373 CTXND1A0A1B0GTU2 59 aa0.42□□□□□ -2.34
CTDSPL2-202ENST00000558373 CHKB-CPT1BH3BT56 60 aa0.42□□□□□ -2.34
CTDSPL2-202ENST00000558373 KRTAP4-1Q9BYQ7 146 aa0.42□□□□□ -2.34
CTDSPL2-202ENST00000558373 KAAG1Q9UBP8 84 aa0.42□□□□□ -2.34
CTDSPL2-202ENST00000558373 KNTC1P50748 2209 aa0.42□□□□□ -2.34
CTDSPL2-202ENST00000558373 UTP20O75691 2785 aaKnown RBP0.42□□□□□ -2.34
CTDSPL2-202ENST00000558373 ZGRF1Q86YA3 2104 aa0.42□□□□□ -2.34
CTDSPL2-202ENST00000558373 CACNA1CQ13936 2221 aa0.42□□□□□ -2.34
CTDSPL2-202ENST00000558373 NBDYA0A0U1RRE5 68 aa0.42□□□□□ -2.34
CTDSPL2-202ENST00000558373 LYNX1G3V0Z9 82 aa0.42□□□□□ -2.34
CTDSPL2-202ENST00000558373 FSIP2Q5CZC0 6907 aa0.42□□□□□ -2.34
CTDSPL2-202ENST00000558373 UNC13CQ8NB66 2214 aa0.42□□□□□ -2.34
CTDSPL2-202ENST00000558373 CEBPZOSA8MTT3 80 aa0.41□□□□□ -2.34
CTDSPL2-202ENST00000558373 M0R135 149 aa0.41□□□□□ -2.34
CTDSPL2-202ENST00000558373 Q96NJ1 140 aa0.41□□□□□ -2.34
CTDSPL2-202ENST00000558373 SPAG17Q6Q759 2223 aa0.41□□□□□ -2.34
CTDSPL2-202ENST00000558373 SPART-AS1P0CW21 52 aa0.41□□□□□ -2.34
CTDSPL2-202ENST00000558373 KRTAP10-4P60372 401 aaPredicted RBP0.41□□□□□ -2.34
CTDSPL2-202ENST00000558373 PRO1854Q9UHT4 67 aa0.41□□□□□ -2.34
CTDSPL2-202ENST00000558373 NDUFA1O15239 70 aa0.41□□□□□ -2.34
CTDSPL2-202ENST00000558373 F8VRH5 84 aa0.41□□□□□ -2.34
CTDSPL2-202ENST00000558373 MAST4O15021 2626 aa0.41□□□□□ -2.34
CTDSPL2-202ENST00000558373 FCER1GP30273 86 aa0.41□□□□□ -2.34
CTDSPL2-202ENST00000558373 DSTQ03001 7570 aaKnown RBP0.4□□□□□ -2.34
CTDSPL2-202ENST00000558373 MMP24-AS1A0A0U1RRL7 71 aa0.4□□□□□ -2.34
CTDSPL2-202ENST00000558373 GNGT2O14610 69 aa0.4□□□□□ -2.34
CTDSPL2-202ENST00000558373 TNP1P09430 55 aa0.4□□□□□ -2.34
CTDSPL2-202ENST00000558373 POLR2KP53803 58 aaKnown RBP0.4□□□□□ -2.34
CTDSPL2-202ENST00000558373 DEFB104AQ8WTQ1 72 aa0.4□□□□□ -2.34
CTDSPL2-202ENST00000558373 TENM1Q9UKZ4 2725 aa0.4□□□□□ -2.35
CTDSPL2-202ENST00000558373 SPRR1BP22528 89 aa0.4□□□□□ -2.35
CTDSPL2-202ENST00000558373 Q8IZM0 81 aa0.4□□□□□ -2.35
CTDSPL2-202ENST00000558373 MUSTN1Q8IVN3 82 aa0.4□□□□□ -2.35
CTDSPL2-202ENST00000558373 PRO3102Q9H379 93 aa0.4□□□□□ -2.35
CTDSPL2-202ENST00000558373 SRRM2Q9UQ35 2752 aaKnown RBP0.39□□□□□ -2.35
CTDSPL2-202ENST00000558373 FN1P02751 2386 aaKnown RBP0.39□□□□□ -2.35
CTDSPL2-202ENST00000558373 IGLV5-48A0A075B6I7 105 aa0.39□□□□□ -2.35
CTDSPL2-202ENST00000558373 K7EIM0 57 aa0.39□□□□□ -2.35
CTDSPL2-202ENST00000558373 M0QY20 66 aa0.39□□□□□ -2.35
CTDSPL2-202ENST00000558373 PRB3Q04118 309 aaPredicted RBP0.39□□□□□ -2.35
CTDSPL2-202ENST00000558373 LELP1Q5T871 98 aa0.39□□□□□ -2.35
CTDSPL2-202ENST00000558373 ZNF292O60281 2723 aa0.39□□□□□ -2.35
CTDSPL2-202ENST00000558373 ETDCA0A1B0GVM5 59 aa0.39□□□□□ -2.35
CTDSPL2-202ENST00000558373 DEFB133Q30KQ1 61 aa0.39□□□□□ -2.35
CTDSPL2-202ENST00000558373 UBE2DNLQ8IWF7 75 aa0.39□□□□□ -2.35
CTDSPL2-202ENST00000558373 TMEM167AQ8TBQ9 72 aa0.39□□□□□ -2.35
CTDSPL2-202ENST00000558373 LINC00208Q96KT6 92 aa0.39□□□□□ -2.35
CTDSPL2-202ENST00000558373 MRPL34Q9BQ48 92 aaKnown RBP0.39□□□□□ -2.35
CTDSPL2-202ENST00000558373 GNG13Q9P2W3 67 aa0.39□□□□□ -2.35
CTDSPL2-202ENST00000558373 TRGV1A0A0A0MS02 117 aa0.39□□□□□ -2.35
CTDSPL2-202ENST00000558373 COX7BP24311 80 aa0.39□□□□□ -2.35
CTDSPL2-202ENST00000558373 Q6ZRX8 168 aa0.39□□□□□ -2.35
CTDSPL2-202ENST00000558373 PRO0255Q9UI72 69 aa0.39□□□□□ -2.35
CTDSPL2-202ENST00000558373 U3KQA8 63 aa0.39□□□□□ -2.35
CTDSPL2-202ENST00000558373 NREPQ16612 68 aa0.38□□□□□ -2.35
CTDSPL2-202ENST00000558373 ZDBF2Q9HCK1 2354 aa0.38□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms